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670
datasets available to search
ShareScore release 0.9.0
Dataset results
670 results for “Hela”
RNA-seq analysis of HeLa cells infected with YK410, a recombinant strain of HSV-1
GEO Series GSE240449. Human alphaherpesvirus 1. 18 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide analysis of miRNA-targeted cellular NMD substrates in HeLa cell
GEO Series GSE16170. Homo sapiens. 6 samples. Type: Expression profiling by array.
Integrating lncRNAs and mRNAs expression profiles in penicillin-induced persistent chlamydial infection in HeLa cells
GEO Series GSE180478. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing; Non-coding RNA profiling by array.
Fip1 iCLIP-seq in Hela cells without treatment or treated with NC ASO, snoRD50a ASO
GEO Series GSE98220. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing; Other.
ENCODE ChIP-chip for BAF155 on Human Hela S3 Cells
GEO Series GSE3549. Homo sapiens. 4 samples. Type: Genome binding/occupancy profiling by genome tiling array.
HeLa cell images with four labels (nuclear envelope, nucleus, rest of the cell, and background) for deep learning architecture training.
<p>This is a data set that contains <strong>labeled HeLa cell images</strong>, generated in MATLAB® Image Labeler, indicating the four different classes - nuclear envelope, nucleus, rest of the cell, and background for <strong>deep learning</strong> architecture training. </p> <p>Details of the imaging and preparation have been published in:</p> <ul> <li>Cefa Karabağ, Martin L. Jones, Christopher J. Peddie, Anne E. Weston, Lucy M. Collinson, Constantino Carlos Reyes-Aldasoro. Segmentation and Modelling of the Nuclear Envelope of HeLa Cells Imaged with Serial Block Face Scanning Electron Microscopy. <em>J. Imaging</em> 2019, <em>5</em>(9), 75; <a href="https://doi.org/10.3390/jimaging5090075">https://doi.org/10.3390/jimaging5090075</a></li> </ul> <p>and</p> <ul> <li>The data sets are freely available through EMPIAR: http://dx.doi.org/10.6019/EMPIAR-10094 EMPIAR.</li> </ul> <p> </p> <p>Details on the segmentation and analysis of HeLa cells have been published in:</p> <ul> <li>Cefa Karabağ, Martin L. Jones, Christopher J. Peddie, Anne E. Weston, Lucy M. Collinson, Constantino Carlos Reyes-Aldasoro. Semantic Segmentation of HeLa Cells: An Objective Comparison between one Traditional Algorithm and Three Deep-Learning Architectures, BioRxiv, https://doi.org/10.1101/2020.03.05.978478</li> </ul> <p>and</p> <ul> <li> <p>Cefa Karabağ, Martin L. Jones, Christopher J. Peddie, Anne E. Weston, Lucy M. Collinson, Constantino Carlos Reyes-Aldasoro. Segmentation and Modelling of the Nuclear Envelope of HeLa Cells Imaged with Serial Block Face Scanning Electron Microscopy. <em>J. Imaging</em> 2019, <em>5</em>(9), 75; <a href="https://doi.org/10.3390/jimaging5090075">https://doi.org/10.3390/jimaging5090075</a></p> </li> </ul> <p> </p>
RIC-seq contacts in HeLa
<p>Contacts derived from HeLa RIC-seq <a href="https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE127188">data</a> by RIC-contacts <a href="https://github.com/smargasyuk/RNAcontacts">pipeline</a>.</p>
hela_mod3_processed
Open the record for dataset details and reuse information.
Expression data from HeLa cells with and without human recombinant TIMP-4 treatment
GEO Series GSE60671. Homo sapiens. 6 samples. Type: Expression profiling by array.
ChIP-seq from HeLa-S3 (ENCSR219MKK)
GEO Series GSE91587. Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
DEK binds to pre-mRNAs and regulated alternative splicing of Hippo signaling genes in HeLa cell [RNA-seq]
GEO Series GSE141565. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
polyA depleted RNA-seq from HeLa-S3 (ENCSR000CQT)
GEO Series GSE90255. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
mRNA transcriptome analysis of hypoxia with shSETDB1 in hela cells
GEO Series GSE179327. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
tRNA level in HeLa, CFBE41o- and primary HBE cells
GEO Series GSE53991. Homo sapiens. 21 samples. Type: Other; Non-coding RNA profiling by array.
RNA-seq analysis of HeLa cells overexpressing histone methyltransferase KMT2B
GEO Series GSE209928. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Study of 5mC-DNA, m6A-RNA and RNA-expression in HeLa, ES and EB [m6A in ES and EB and RNAseq in EB]
GEO Series GSE218292. Mus musculus. 58 samples. Type: Methylation profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Transcriptomes analysis for the regulation of Z36 induced autophagy in HeLa cell death
GEO Series GSE130006. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Epigenomic profiling of TASOR in Hela cells using CUT&RUN and CUT&Tag
GEO Series GSE155693. Homo sapiens. 26 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
DNase-seq from HeLa-S3 (ENCSR959ZXU)
GEO Series GSE90432. Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
RNA-seq analysis of TALEN-mediated LATS2 knockout HeLa-S3 cells
GEO Series GSE63537. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.