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314
datasets available to search
ShareScore release 0.7.1
Dataset results
314 results for “genome architecture”
An EGR1-dependent cascade modulates genome architecture at the CSF1R locus [Capture-C]
GEO Series GSE283670. Homo sapiens. 10 samples. Type: Other.
The chaperone FACT and H2B ubiquitination maintain S. pombe genome architecture through genic and subtelomeric functions [RNA-seq]
GEO Series GSE124090. Schizosaccharomyces pombe. 8 samples. Type: Expression profiling by high throughput sequencing.
An EGR1-dependent cascade modulates genome architecture at the CSF1R locus [ChIP-seq]
GEO Series GSE283718. Homo sapiens. 26 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
LncRNA-induced spread of Polycomb controlled by genome architecture, RNA abundance, and CpG island DNA
GEO Series GSE118402. Mus musculus. 85 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Ultrafine Mapping of Chromosome Conformation at hundred basepair resolution reveals regulatory genome architecture
GEO Series GSE161014. Homo sapiens. 5 samples. Type: Other.
3D genomics across the tree of life reveals condensin II as a determinant of architecture type [DamID-seq]
GEO Series GSE163626. Homo sapiens. 18 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
3D genomics across the tree of life reveals condensin II as a determinant of architecture type
GEO Series GSE163641. Homo sapiens. 29 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Rapid depletion of the cohesin subunits and CTCF reveals their role in maintaining high-order genome architecture [pA-DamID]
GEO Series GSE181693. Mus musculus. 116 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Comparative 3D Genome Architectures of Adipose Tissues Provide Insight into Human-specific Regulation of Metabolic Homeostasis
GEO Series GSE199968. Mus musculus; Ovis aries. 20 samples. Type: Other; Expression profiling by high throughput sequencing.
Genome-wide expression analysis of mouse chromosome 2 in gonadal fat and liver tissues reveals a complex architecture of obesity
GEO Series GSE20724. Mus musculus. 96 samples. Type: Expression profiling by array.
Rapid depletion of the cohesin subunits and CTCF reveals their role in maintaining high-order genome architecture [DamID and ChIP]
GEO Series GSE183958. Mus musculus. 14 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Dissection of c-AMP Response Element Architecture by Using Genomic and Episomal Massively Parallel Reporter Assays
GEO Series GSE137922. Escherichia coli; Homo sapiens. 55 samples. Type: Other.
Architectural role of cell-fate-instructive transcription factor MyoD in orchestrating 3D genome organization in muscle cells.
GEO Series GSE157339. Mus musculus. 122 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Three-dimensional genome architecture persists in a 52,000-year-old woolly mammoth skin sample
GEO Series GSE268050. Bos taurus; Homo sapiens; Elephas maximus indicus; Equus asinus; Mammuthus primigenius. 136 samples. Type: Other; Third-party reanalysis.
Genome models integrating chromatin contacts and nuclear lamin-genome interactions reveal implications of laminopathy-causing lamin mutations on genome architecture
GEO Series GSE81671. Homo sapiens. 25 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Genome-wide fetalization of enhancer architecture in heart disease [RNA-Seq]
GEO Series GSE126569. Homo sapiens. 38 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide fetalization of enhancer architecture in heart disease
GEO Series GSE126573. Homo sapiens. 136 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Genome-wide maps of chromatin architecture in human adipose derived stem cells isolated from abdominal (ABD) and gluteofemoral (GLU) subcutaneous adipose tissue
GEO Series GSE224777. Homo sapiens. 40 samples. Type: Other.
Reorganization of 3D chromatin architecture of rice genomes during heat stress (Bisulfite-seq)
GEO Series GSE144562. Oryza sativa. 8 samples. Type: Methylation profiling by high throughput sequencing.
TEX cell fate and differentiation are shaped by 3D genome reorganization and chromatin architecture integrity [RNA-seq]
GEO Series GSE275499. Mus musculus. 18 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.