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1,353
datasets available to search
ShareScore release 0.9.0
Dataset results
1,353 results for “single-cell transcriptomics”
Single-cell transcriptomics of human organoid-derived enteroendocrine cell populations from the small intestine.
GEO Series GSE284419. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome Atlas reveals embryonic endothelial heterogeneity
GEO Series GSE216970. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
High throughput single-cell whole transcriptome analysis of induced cardiomyocytes during direct cardiac reprogramming [Bulk-seq]
GEO Series GSE98569. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomics, Regulatory Syntax, and Enhancer Identification in Heterogenous Populations of Mesoderm-Induced ESCs at Single-Cell Resolution
GEO Series GSE198730. Mus musculus. 39 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Single-cell transcriptomics reveals gene signatures and alterations associated with aging in distinct neural stem cell subpopulations
GEO Series GSE100389. Mus musculus. 28 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic and epigenetic analyses in the embryonic mouse cerebellum
GEO Series GSE178546. Mus musculus. 5 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single-cell transcriptomics identifies altered neutrophil dynamics and accentuated T-cell cytotoxicity in tobacco -flavored e-cigarette -exposed mouse lungs
GEO Series GSE263903. Mus musculus. 10 samples. Type: Expression profiling by high throughput sequencing.
Validation of single-cell transcriptomic profiles from Illumina and MGI Tech sequencing platforms.
GEO Series GSE275090. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Cell type atlas and lineage tree of a whole complex animal by single-cell transcriptomics
GEO Series GSE103633. Schmidtea mediterranea. 11 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic atlas of enteroendocrine cells along the murine gastrointestinal tract.
GEO Series GSE269778. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing; Third-party reanalysis.
Gonadotropin-releasing hormone 3 and gonadotropes relationships in female zebrafish pituitary revealed by single-cell transcriptomics
GEO Series GSE272806. Danio rerio. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic sampling of regenerating mouse muscle tissue
GEO Series GSE159500. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
A single-cell plume transcriptome atlas of the cold-seep tubeworm Paraescarpia echinospica [ONT]
GEO Series GSE283331. Paraescarpia echinospica. 1 samples. Type: Expression profiling by high throughput sequencing.
Single-cell and spatial transcriptome analysis reveals the cellular heterogeneity of liver metastatic colorectal cancer
GEO Series GSE225857. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing; Other.
Cross-species single-cell transcriptomic analysis reveals divergence of cell composition and functions in mammalian ileum epithelium [scRNA-seq_Pig]
GEO Series GSE196659. Sus scrofa. 1 samples. Type: Expression profiling by high throughput sequencing.
A single-cell transcriptome atlas of the human pancreas
GEO Series GSE81076. Homo sapiens. 18 samples. Type: Expression profiling by high throughput sequencing.
Parental allele specific single-cell transcriptome dynamics reveal incomplete epigenetic reprogramming in human female germ cells
GEO Series GSE79280. Homo sapiens. 108 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell Transcriptome Profiling Reveals β Cell Maturation in Stem Cell-Derived Islets after Transplantation
GEO Series GSE151117. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Bulk and single-cell transcriptome profiling of hESC-derived definitive endoderm cells induced by small molecules
GEO Series GSE185628. Homo sapiens. 35 samples. Type: Expression profiling by high throughput sequencing.
A Single-cell Transcriptomic Atlas of Primate Pancreatic Islet Aging
GEO Series GSE120180. Macaca fascicularis. 64 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.