Skip to main content
Powered by ShareScore

Find research datasets worth reusing

Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.

11,105

datasets available to search

ShareScore release 0.9.0

Reset

Dataset results

11,105 results for “single cells”

Learn how ShareScore rates datasets ↗
geo24/100

Single-cell transcriptomic profiling provides insights into disease-related processes in human hypertrophic cardiomyopathy

GEO Series GSE138262. Homo sapiens. 16 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenApr 2022View details →
geo24/100

Single cell gene expression of melanocyte specific Braf mutant mouse skin

GEO Series GSE154679. Mus musculus. 10 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenOct 2020View details →
geo24/100

Peanut Allergy Oral Immunotherapy Drives Single-Cell Multi-omic Changes in Peanut-reactive T cells Associated with Sustained Unresponsiveness

GEO Series GSE288452. Homo sapiens. 22 samples. Type: Expression profiling by high throughput sequencing; Other.

openGEO-OpenSep 2025View details →
geo24/100

Single-cell Next Generation Sequencing (scNGS) facilitates analysis of gonadal single cells transcriptomes and revealed germ cell heterogeneity

GEO Series GSE177478. Taeniopygia guttata. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2021View details →
geo24/100

Mapping the Cellular Biogeography of Human Bone Marrow Niches Using Single-Cell Transcriptomics

GEO Series GSE253355. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenApr 2024View details →
geo24/100

Single-Cell Exon Deletion Profiling Reveals Splicing Events That Shape Gene Expression and Cell State Dynamics [RNA-seq_Rescue_exp]

GEO Series GSE292988. Homo sapiens. 18 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2026View details →
geo24/100

Single-cell transcriptome analysis reveals differential nutrient absorption functions in human intestine

GEO Series GSE125970. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenOct 2019View details →
geo24/100

Single-cell landscapes of primary glioblastomas and matched organoids and cell lines reveal variable retention of inter- and intra-tumor heterogeneity [scRNA-seq]

GEO Series GSE173278. Homo sapiens. 99 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenFeb 2022View details →
geo24/100

Human single cell RNA-sequencing reveals a targetable CD8+ exhausted T cell population that maintains murine low-grade glioma growth

GEO Series GSE244433. Mus musculus; Homo sapiens. 16 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenOct 2024View details →
geo24/100

Single cell analysis of protein epitopes and chromatin accessibility using PHAGE-ATAC [Species_Mix_GFP]

GEO Series GSE157485. Mus musculus; Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.

openGEO-OpenOct 2021View details →
geo24/100

Single-cell RNA and protein profiling of immune cells from the mouse brain and its border tissues

GEO Series GSE191075. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing; Other.

openGEO-OpenDec 2021View details →
geo24/100

Dynamic single-cell RNA sequencing identifies immunotherapy persister cells following PD-1 blockade II

GEO Series GSE160400. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenOct 2020View details →
geo24/100

Systematic identification of cell fate regulatory programs using a single-cell atlas of mouse development

GEO Series GSE178217. Mus musculus. 26 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenApr 2022View details →
geo24/100

A cell atlas of the adult Aedes aegypti midgut revealed by single nucleus RNA-Seq

GEO Series GSE245622. Aedes aegypti. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenOct 2023View details →
geo24/100

Single Cell Atlas of Injured Sciatic Nerve Tissue

GEO Series GSE153762. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2021View details →
geo24/100

Characterization of Transcriptomic Profile in Early Zebrafish PGCs by Single Cell Sequencing

GEO Series GSE122208. Danio rerio. 9 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenFeb 2019View details →
geo24/100

T cell regeneration from pluripotent stem cells by defined transcription factors Runx1 and Hoxa9 [single hematopoietic cells (iR9-iHEC&iR9-iHPC) II]

GEO Series GSE128738. Mus musculus. 160 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2020View details →
geo24/100

Characterization of effects of estrogen, progesterone and the endocrine-disrupting chemicals on mouse mammary gland in 4-vinylcyclohexene diepoxide-induced menopause model via single-cell RNA-sequenci

GEO Series GSE191219. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenFeb 2022View details →
geo24/100

Single-cell transcriptomics reveals common epithelial response patterns in human acute kidney injury

GEO Series GSE210622. Homo sapiens. 14 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2022View details →
geo24/100

A Single-Cell Atlas of Cell Types, States, and Other Transcriptional Patterns from Nine Regions of the Adult Mouse Brain

GEO Series GSE116470. Mus musculus. 104 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2018View details →

ScienceDex guides

Understand access before you commit

These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record

ScienceDex for faculty

Your academic CV and NIH biosketch

Make your CV in your school's format and your NIH biosketch from it, then download both as Word files.