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7,849 results for “Conservancy”
Supplementary material 3 from: Osawa T, Ueno Y, Nishida T, Nishihiro J (2020) Do both habitat and species diversity provide cultural ecosystem services? A trial using geo-tagged photos. Nature Conservation 38: 61-77. https://doi.org/10.3897/natureconservation.38.36166
: Explanation note: Table S1. All plants and main habitats in the study area. Table S2. All birds and main habitats in the study area. Table S3. All butterflies and main habitats in the study area. Table S4. All dragonflies and main habitats in the study area. Table S5. List of threatened plants in the study area. Table S6. Picture objects list which took in area with threatened species from spring to autumn.
R workspace: A scalable and transferable approach to combining emerging conservation technologies to identify biodiversity change after large disturbances
<p>R workspace and associated code used in the the manuscript '<span>A scalable and transferable approach to combining emerging conservation technologies to identify biodiversity change after large disturbances'</span></p>
Data for: Engineering A-type Dye-decolorizing Peroxidases by Modification of a Conserved Glutamate Residue
<p><span>Dye-decolorizing peroxidases (DyPs) are recently identified microbial enzymes that have been used in several Biotechnology applications from wastewater treatment to lignin valorization. However, their properties and mechanism of action still have many open questions. Their heme-containing active site is buried by three conserved flexible loops with a putative role in modulating substrate access and enzyme catalysis. Here, we investigated the role of a conserved glutamate residue in stabilizing interactions in loop 2 of A-type DyPs. First, we did site saturation mutagenesis of this residue, replacing it with all possible amino acids in bacterial DyPs from Bacillus subtilis (BsDyP) and from Kitasatospora aureofaciens (KaDyP1), the latter being characterized here for the first time. We screened the resulting libraries of variants for activity towards ABTS and identified variants with increased catalytic efficiency. The selected variants were purified and characterized for activity and stability. We furthermore used Molecular Dynamics simulations to rationalize the increased catalytic efficiency and found that the main reason is the electron channeling becoming easier from surface-exposed tryptophans. Based on our findings, we also propose that this glutamate could work as a pH switch in the wild-type enzyme, preventing intracellular damage. </span></p>
Ecological and anthropogenic factors influencing the habitat use of Bos gaurus and its conservation threats in Chitwan National Park, Nepal
<p>This is the dataset of gaur from chitwan national park on habitat use</p>
FIGURE 5 in Taxonomy, distribution, and conservation status of a rare arboreal lizard, Bronchocela celebensis Gray, 1845 (Reptilia: Agamidae) endemic to Sulawesi, Indonesia
FIGURE 5. Bronchocela celebensis in life (adult female, not collected) from Pangana Village, Central Sulawesi, Indonesia (Photo © J.A. McGuire).
FIGURE 3 in Taxonomy, distribution, and conservation status of a rare arboreal lizard, Bronchocela celebensis Gray, 1845 (Reptilia: Agamidae) endemic to Sulawesi, Indonesia
FIGURE 3. Principal Component Analysis (PCA) biplot of morphometric variation between Bronchocela celebensis (red), B. cristatella sensu stricto from Java (green) and sensu lato from adjacent islands of southern Sulawesi (blue), with (A1) combined sexes showing the morphological distinctiveness of B. celebensis; (A2) the same base biplots with vectors associated with species clusters. Each point represents an individual specimen, and the relative distance between two points is equivalent to the amount of dissimilarity.
FIGURE 2 in Taxonomy, distribution, and conservation status of a rare arboreal lizard, Bronchocela celebensis Gray, 1845 (Reptilia: Agamidae) endemic to Sulawesi, Indonesia
FIGURE 2. Boxplots of (A) head length, (B) snout–vent length, and (C) tail length of Bronchocela celebensis, B. cristatella sensu stricto from Java, and sensu lato from adjacent islands of southern Sulawesi; top, middle and bottom lines of the boxes indicate 75th percentile, median and 25th percentile, respectively.
FIGURE 1 in Taxonomy, distribution, and conservation status of a rare arboreal lizard, Bronchocela celebensis Gray, 1845 (Reptilia: Agamidae) endemic to Sulawesi, Indonesia
FIGURE 1. Current distribution map showing the collection/observation localities of Bronchocela celebensis (red) and its allopatric congener, B. cristatella sensu lato (blue) on adjacent islands of southern Sulawesi.
FIGURE 4 in Taxonomy, distribution, and conservation status of a rare arboreal lizard, Bronchocela celebensis Gray, 1845 (Reptilia: Agamidae) endemic to Sulawesi, Indonesia
FIGURE 4. Bronchocela celebensis holotype (NHMUK 1946.8.11.48, adult female) from Sulawesi, Indonesia: (A) lateral view of the anterior body, (B) dorsal head, (C) lateral head, (D) ventral head.
Data and code used for the paper "Global trends and biases in biodiversity conservation research"
Open the record for dataset details and reuse information.
The dataset for β diversity pattern of megabenthic community on a seamount of Philippine Sea: Implications for conservation planning on the Kyushu-Palau Ridge
Open the record for dataset details and reuse information.
Gait data of idiopathic toe walking patients with pre & post sessions in surgical or conservative treatment group & healthy participants including ankle kinematics & kinetics
<p>This dataset contains gait data of 29 Idiopathic Toe Walking (ITW) patients and 21 Healthy participants from the Kinesiology Laboratory database. For the ITW population, the gait data of two clinical gait analyses were included, one before and one after surgical or conservative treatment. The dataset includes the trajectory of lower body markers, ankle kinematics and moments as well as calculated gait parameters. The markers' trajectory, ankle kinematics and moments are stored in c3d files, a biomechanics standard file format. The ankle kinematics and moments are also stored in the following csv or xlsx files: <em>ControlGroup_DataPerCycle.csv</em>, <em>ITW_DataPerCycle.xlsx</em> & <em>ITW_Matched_DataPerCycle.xlsx</em>; one row corresponding to the data of one gait cycle. The gait parameters were computed from the kinematics & kinetics data and were stored in the following xlsx files: <em>ITW_WithWithoutSurg.xlsx</em> & <em>ITW_WithWithoutSurg_matched.xlsx</em>; one row corresponding to the data of one clinical gait analysis.</p>
Trends in the global trade of live CITES-listed raptors: Trade volumes, spatiotemporal dynamics and conservation implications
<p>The global legal wildlife trade is worth US$4-20 billion to the world's economy every year. Raptors frequently enter the wildlife trade for use as display animals, by falconers or hobbyists for sport and recreation. Using data from the Convention on International Trade in Endangered Species of Wild Fauna and Flora's (CITES) Trade Database, we examined trends in the global, legal commercial trade of CITES-listed raptors between 1975-2020. Overall 272 raptor species were traded, totalling 188,149 individuals, with the number of traded raptors increasing over time. Hybrid Falcons (N = 50,366) were most commonly traded, comprising more than a third of the global diurnal CITES-listed raptor trade, followed by Gyrfalcons (<em>Falco rusticolus</em>; N = 30,510), Saker Falcons (<em>F. cherrug</em>; N = 21,679), Peregrine Falcons (<em>F. peregrinus</em>; N = 13,390) and Northern White-faced Owls (<em>Ptilopsis leucotis</em>; N = 6,725). More than half of wild-caught diurnal raptors were classified as globally threatened. The United Kingdom was the largest exporter of live raptors and the United Arab Emirates was the largest importer. More affluent countries were likely to import more raptors than those less affluent. Larger-bodied diurnal species were traded more relative to their smaller-bodied conspecifics. Following the introduction of the European Union's Wild Bird Trade Ban in 2005, the number of traded wild-caught raptors declined. Despite its limitations, the CITES Trade Database provides an important baseline of the legal trade of live raptors for commercial purposes. However, better understanding of illegal wildlife trade networks and smuggling routes, both on-the-ground and online, are essential for future conservation efforts.</p>
Data for: Identifying the knowledge and capacity gaps in Southeast Asian insect conservation
<p>Datasets used in the paper "Identifying the knowledge and capacity gaps in Southeast Asian insect conservation".</p> <p>Curated datasets are provided in <em>Curated_Datasets.zip</em> and consists of (1) Insect occurrence, (2) primary literature, (3) authorship, (4) funding, and (5) Twitter data. Refer to <em>README_curated_datasets.txt</em> for more information on each dataset and their term definitions.</p> <p>Raw insect occurrence data from GBIF are provided in <em>GBIF_Raw_Insect_Occurrences.zip</em>. Refer to <em>README_GBIF_Raw_Insect_Occurrences.txt</em> for more information on each dataset and their term definitions.</p> <p>Data and models used in the authors' spaCy classifier analysis are provided in <em>spaCy_Data.zip</em> and <em>spaCy_Model_Best.zip</em>. Refer to <em>README_spacy.txt</em> for more information on each file and term definitions of the datasets used.</p> <p>Accompanying codes used to produce the figures and conduct the analyses are available in Github (https://github.com/teelabntu/SEA_Insect_Conservation).</p>
INDEX OF ARTICLES PUBLISHED IN THE JOURNAL "NATURE CONSERVATION RESEARCH"
<p>This data file includes the list of articles previously published in the journal “Nature Conservation Research” (https://ncr-journal.bear-land.org/).</p> <p>All articles are grouped by the research thematic.</p> <p>As an explanation of each article, a brief (one sentence) description is provided by highlighting its contents. The Archive of the journal is available here: https://ncr-journal.bear-land.org/journal</p>
Ecosystem roles and conservation status of bioturbator mammals
<p>The action of biological reworking of soils is referred to as bioturbation, and many species of mammals globally have an important role in soil disturbance, modifying ecosystem characteristics.</p> <p>We examined global patterns in the distribution, conservation status, and threats to the world's bioturbator mammals and illustrated the relevant roles these species play in ecosystem engineering related to soil processes and services. We searched the data available on 3932 non‐flying land‐dwelling mammals included in the International Union for Conservation of Nature's (IUCN) Red List.</p> <p>Using existing literature and online databases, we determined that 869 (22%) of the non‐flying land‐dwelling mammals accessed can be considered as bioturbators in three distinct groups: foragers (<em>n = </em>123), semi‐fossorial species (<em>n = </em>652), and strictly fossorial species (<em>n = </em>94). Of the world's bioturbator mammal species, 16% are threatened, 2% are already Extinct, and 8% are classified as Data Deficient. Foragers have the highest percentage of threatened (35%) and Extinct (5%) species, while strictly fossorial species have the highest percentage of Data Deficient species (12%). Although the majority of bioturbator mammal species are found in Asia (32%), Oceania is the continent with the highest percentage of threatened (27%) and Extinct (11%) bioturbator species, while Central and South America have the highest percentage of species classified as Data Deficient (24%). The threats experienced by the greatest number of bioturbator mammal species are activities related to agriculture and aquaculture (29%), and biological resource use (22%).</p> <p>Soil bioturbation can improve ecosystem health by reducing soil compaction, increasing nutrient cycling, soil moisture, microbe diversity, plant recruitment, and carbon storage. The loss of bioturbator mammals could trigger cascading effects throughout the ecosystems they inhabit. A better understanding of their conservation status is important so that effective conservation measures can be developed.</p>
Supplementary material 1 from: Petza D, Anastopoulos P, Coll M, Garcia SM, Kaiser M, Kalogirou S, Lourdi I, Rice J, Sciberras M, Katsanevakis S (2021) The contribution of Area-Based Fisheries Management Measures to Fisheries Sustainability and Marine Conservation: a global scoping review protocol. Research Ideas and Outcomes 7: e70486. https://doi.org/10.3897/rio.7.e70486
The contribution of Area-Based Fisheries Management Measures to Fisheries Sustainability and Marine Conservation: a global scoping review protocol - Search Strategy
Supplementary material 2 from: Petza D, Anastopoulos P, Coll M, Garcia SM, Kaiser M, Kalogirou S, Lourdi I, Rice J, Sciberras M, Katsanevakis S (2021) The contribution of Area-Based Fisheries Management Measures to Fisheries Sustainability and Marine Conservation: a global scoping review protocol. Research Ideas and Outcomes 7: e70486. https://doi.org/10.3897/rio.7.e70486
The contribution of Area-Based Fisheries' Management Measures to Fisheries Sustainability and Marine Conservation: a global scoping review protocol - Data Extraction Tool
FIGURE 2 in Rediscovery of Oocephalus foliosus (Hyptidinae-Lamiaceae): notes on taxonomy and conservation of a species endemic to the campo rupestre of Central Brazil
FIGURE 2. Oocephalus foliosus: a: Flowering branch; b: Inflorescence in detail; c: Detail of outer bracteoles highlighting glandular trichomes. Photos: Arthur Soares.
FIGURE 1 in Rediscovery of Oocephalus foliosus (Hyptidinae-Lamiaceae): notes on taxonomy and conservation of a species endemic to the campo rupestre of Central Brazil
FIGURE 1. Distribution map of Oocephalus foliosus (white triangles). White circle with black dot represents Brasília, federal capital of Brazil. Acronyms refers to Brazilian states: DF: Distrito Federal; GO: Goiás; MG: Minas Gerais.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.