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APPENDIX 2 in Phylogenetic relationships and systematics of a subclade of Mesoamerican emerald hummingbirds (Aves: Trochilidae: Trochilini)
APPENDIX 2. Average substitution rates for molecular markers.
FIGURE 8 in Description and phylogenetic relationships of a new trans-Andean species of Elachistocleis Parker 1927 (Amphibia, Anura, Microhylidae)
FIGURE 8. Habitat of the holotype of Elachistocleis araios sp. n.
Figures 6-9 from: Jiang C, Bai Y, Shi M, Liu J (2020) Rediscovery and phylogenetic relationships of the scolopendromorph centipede Mimops orientalis Kraepelin, 1903 (Chilopoda): a monotypic species of Mimopidae endemic to China, for more than one century. ZooKeys 932: 75-91. https://doi.org/10.3897/zookeys.932.51461
Figures 6-9 Head of Mimops orientalis Kraepelin, 1903 6, 7 Head and tergite 1 and 2, dorsal and ventral views 8, 9 dorsal views of the right antenna.
Figures 2-5 from: Jiang C, Bai Y, Shi M, Liu J (2020) Rediscovery and phylogenetic relationships of the scolopendromorph centipede Mimops orientalis Kraepelin, 1903 (Chilopoda): a monotypic species of Mimopidae endemic to China, for more than one century. ZooKeys 932: 75-91. https://doi.org/10.3897/zookeys.932.51461
Figures 2-5 Habitat of Mimops orientalis2, 3 Habitat at locality of M. orientalis in Taiping National Forest Park, Hu county, Shaanxi, China 4, 5 living specimens of M. orientalis.
Figures 16-18 from: Jiang C, Bai Y, Shi M, Liu J (2020) Rediscovery and phylogenetic relationships of the scolopendromorph centipede Mimops orientalis Kraepelin, 1903 (Chilopoda): a monotypic species of Mimopidae endemic to China, for more than one century. ZooKeys 932: 75-91. https://doi.org/10.3897/zookeys.932.51461
Figures 16-18 Ultimate segment and ultimate legs of Mimops orientalis16 Ventral view of the ultimate segment 17 dorsal view of the ultimate segment 18 dorsal view of ultimate legs.
Figure 1 from: Jiang C, Bai Y, Shi M, Liu J (2020) Rediscovery and phylogenetic relationships of the scolopendromorph centipede Mimops orientalis Kraepelin, 1903 (Chilopoda): a monotypic species of Mimopidae endemic to China, for more than one century. ZooKeys 932: 75-91. https://doi.org/10.3897/zookeys.932.51461
Figure 1 The current known distribution of Mimops orientalis. Two main record localities were in Shaanxi and Henan provinces, China, indicated by a red dot and a green pentagon, respectively; the red dot perhaps indicates the type locality.
Figures 10-15 from: Jiang C, Bai Y, Shi M, Liu J (2020) Rediscovery and phylogenetic relationships of the scolopendromorph centipede Mimops orientalis Kraepelin, 1903 (Chilopoda): a monotypic species of Mimopidae endemic to China, for more than one century. ZooKeys 932: 75-91. https://doi.org/10.3897/zookeys.932.51461
Figures 10-15 10 Coxosternite and forcipules of Mimops orientalis11–15 Trunk segment features of Mimops orientalis. 11 Tergites 11–13, showing paramedian sutures and spiracle 12 sternites 5–7, showing sutures 13 spiracle on segment 5 14 ventral view of legs 5–7 (right) 15 dorsal view of leg 3 (right).
Figures 23-27 from: Jiang C, Bai Y, Shi M, Liu J (2020) Rediscovery and phylogenetic relationships of the scolopendromorph centipede Mimops orientalis Kraepelin, 1903 (Chilopoda): a monotypic species of Mimopidae endemic to China, for more than one century. ZooKeys 932: 75-91. https://doi.org/10.3897/zookeys.932.51461
Figures 23-27 Ocelli characteristics of Scolopendromorpha23Mimops orientalis24Theatops chuanensis25Scolopendra mutilans26Scolopocryptops nigrimaculatus27Cryptops sp.
Figures 21- 22 from: Jiang C, Bai Y, Shi M, Liu J (2020) Rediscovery and phylogenetic relationships of the scolopendromorph centipede Mimops orientalis Kraepelin, 1903 (Chilopoda): a monotypic species of Mimopidae endemic to China, for more than one century. ZooKeys 932: 75-91. https://doi.org/10.3897/zookeys.932.51461
Figures 21- 22 Phylogenetic trees obtained from the COI, 16S, and 28S sequences 21ML tree from the analysis of the concatenated genes 22 tree from the Bayesian analysis of all genes combined. Numbers at the nodes are bootstrap percentages obtained from the ML analyses and posterior probabilities obtained from BI.
Figure 6 from: Soares KDA, de Carvalho MR (2020) Phylogenetic relationship of catshark species of the genus Scyliorhinus (Chondrichthyes, Carcharhiniformes, Scyliorhinidae) based on comparative morphology. Zoosystematics and Evolution 96(2): 345-395. https://doi.org/10.3897/zse.96.52420
Figure 6 Caudal region. A, detail of dorsal fins in Scyliorhinus haeckelii, UERJ 2202, male, 444 mm TL; B, detail of dorsal fins in Parmaturus xaniurus, CAS 232152, female, 450 mm TL. Scale bar: 25 mm.
Figure 4 from: Soares KDA, de Carvalho MR (2020) Phylogenetic relationship of catshark species of the genus Scyliorhinus (Chondrichthyes, Carcharhiniformes, Scyliorhinidae) based on comparative morphology. Zoosystematics and Evolution 96(2): 345-395. https://doi.org/10.3897/zse.96.52420
Figure 4 Labial cartilages. A, detail of labial cartilages in Scyliorhinus ugoi, USNM 221611, male, 432 mm TL; B, detail of labial cartilages in Asymbolus rubiginosus, AMS I.30393-004, male, 527 mm TL. ucl, upper labial cartilage; lcl, lower labial cartilage.
Figure 30 from: Soares KDA, de Carvalho MR (2020) Phylogenetic relationship of catshark species of the genus Scyliorhinus (Chondrichthyes, Carcharhiniformes, Scyliorhinidae) based on comparative morphology. Zoosystematics and Evolution 96(2): 345-395. https://doi.org/10.3897/zse.96.52420
Figure 30 Strict consensus cladogram of the three equally most-parsimonious trees (L = 233, CI = 0.37, RI = 0.69). Number of clades shown above branches. Values of relative Bremer support shown below branches.
Figure 3 from: Soares KDA, de Carvalho MR (2020) Phylogenetic relationship of catshark species of the genus Scyliorhinus (Chondrichthyes, Carcharhiniformes, Scyliorhinidae) based on comparative morphology. Zoosystematics and Evolution 96(2): 345-395. https://doi.org/10.3897/zse.96.52420
Figure 3 Nasoral region with lifted anterior nasal flap and exposed posterior nasal flap. A, Scyliorhinus canicula, USNM 221470, female, 438 mm TL; B, Atelomycterus fasciatus, CSIRO H1298-7, male, 370 mm TL; C, Haploblepharus edwardsii, AMNH 40988, male, 480 mm TL. anf, anterior nasal flap; ful, flap on the upper lip margin; llf, lower labial furrow; ng, nasoral groove; pnf, posterior nasal flap; pog, postoral groove; ulf, upper labial furrow; umf, upper mesonarial flap. Scale bar: 20 mm.
Figure 5 from: Soares KDA, de Carvalho MR (2020) Phylogenetic relationship of catshark species of the genus Scyliorhinus (Chondrichthyes, Carcharhiniformes, Scyliorhinidae) based on comparative morphology. Zoosystematics and Evolution 96(2): 345-395. https://doi.org/10.3897/zse.96.52420
Figure 5 Pelvic apron. A, detail of pelvic apron in Scyliorhinus comoroensis, MNHN 1984–0701, male, 457.2 mm TL; B, detail of pelvic apron in S. capensis, SAIAB 27577, male, 863 mm TL. imp, inner margins of pelvic fins; pa, pelvic apron. Modified from Soares and de Carvalho (2019).
Figure 29 from: Soares KDA, de Carvalho MR (2020) Phylogenetic relationship of catshark species of the genus Scyliorhinus (Chondrichthyes, Carcharhiniformes, Scyliorhinidae) based on comparative morphology. Zoosystematics and Evolution 96(2): 345-395. https://doi.org/10.3897/zse.96.52420
Figure 29 Color patterns. A, Scyliorhinus canicula, MNHN 1999–1732, female, 418.5 mm TL; B, Scyliorhinus retifer, UF 36359, male, 372 mm TL; C, Scyliorhinus torazame, NSMT 50632, male, 427.9 mm TL; D, Scyliorhinus torrei, USNM 157852, male, 285 mm TL; E, Atelomycterus fasciatus, CSIRO H1298-7, male, 370 mm TL; F, Parmaturus angelae, MZUSP 124001, female, 425 mm TL; G, Poroderma pantherinum, SAIAB 34577, male, 640 mm TL; H, Poroderma africanum, SAIAB 25343, male, 920 mm TL. Scale bar: 20 mm.
Figure 28 from: Soares KDA, de Carvalho MR (2020) Phylogenetic relationship of catshark species of the genus Scyliorhinus (Chondrichthyes, Carcharhiniformes, Scyliorhinidae) based on comparative morphology. Zoosystematics and Evolution 96(2): 345-395. https://doi.org/10.3897/zse.96.52420
Figure 28 Detail of the clasper siphon. A, Apristurus longicephalus, HUMZ 170382, 475 mm TL; B, Holohalaelurus regani, SAIAB 25717, 610 mm TL; C, Poroderma africanum, SAIAB 25343, 920 mm TL; D, Asymbolus rubiginosus, AMS I.30393-004, 527 mm TL; E, Halaelurus natalensis, SAIAB 26951, 400 mm TL; F, Haploblepharus edwardsii, AMNH 40988, 480 mm TL. Scale bar: 20 mm.
Figure 9 from: Soares KDA, de Carvalho MR (2020) Phylogenetic relationship of catshark species of the genus Scyliorhinus (Chondrichthyes, Carcharhiniformes, Scyliorhinidae) based on comparative morphology. Zoosystematics and Evolution 96(2): 345-395. https://doi.org/10.3897/zse.96.52420
Figure 9 Detail of the postorbital musculature. A, Schroederichthys maculatus, UF 65846, male, 313 mm TL; B, Poroderma africanum, AMNH 43134, male, 505 mm TL. mdp, muscle depressor palpebrae nictitantis; mlp, m. levator palpebrae nictitantis; mrp, m. retractor palpebrae nictitantis; msp, m. espiracularis, ob, orbit; sp, spiracle.
Figure 31 from: Soares KDA, de Carvalho MR (2020) Phylogenetic relationship of catshark species of the genus Scyliorhinus (Chondrichthyes, Carcharhiniformes, Scyliorhinidae) based on comparative morphology. Zoosystematics and Evolution 96(2): 345-395. https://doi.org/10.3897/zse.96.52420
Figure 31 Phylogenetic hypotheses of the subfamily Scyliorhininae. A, morphology- based hypothesis (present work; Compagno, 1988a); B, molecular-based hypothesis (Naylor et al., 2012a, 2012b).
Figure 27 from: Soares KDA, de Carvalho MR (2020) Phylogenetic relationship of catshark species of the genus Scyliorhinus (Chondrichthyes, Carcharhiniformes, Scyliorhinidae) based on comparative morphology. Zoosystematics and Evolution 96(2): 345-395. https://doi.org/10.3897/zse.96.52420
Figure 27 Clasper; skeleton. A, Scyliorhinus boa, USNM 221563, 348 mm TL; B, Scyliorhinus canicula, BMNH 1983.8.3.1–4, 585.7 mm TL; C, Scyliorhinus capensis, SAIAB 27577, 863 mm TL; D, Scyliorhinus retifer, UF 36359, 372 mm TL; E, Scyliorhinus stellaris, BMNH 1976.7.30.10, 476 mm TL; F, Scyliorhinus torazame, NSMT 50632, 427.9 mm TL. end, endstyle; rd, dorsal marginal cartilage; rv, ventral marginal cartilage; t3, accessory terminal cartilage; td, dorsal terminal cartilage; td2, dorsal terminal 2 cartilage; tv, ventral terminal cartilage; tv2, ventral terminal 2 cartilage. Modified from Soares and de Carvalho (2019).
Figure 23 from: Soares KDA, de Carvalho MR (2020) Phylogenetic relationship of catshark species of the genus Scyliorhinus (Chondrichthyes, Carcharhiniformes, Scyliorhinidae) based on comparative morphology. Zoosystematics and Evolution 96(2): 345-395. https://doi.org/10.3897/zse.96.52420
Figure 23 Detail of the gill pickax. A, Scyliorhinus haeckelii, UERJ 1691, male, 522 mm TL; B, Cephaloscyllium sufflans, SAIAB 6242, male, 800 mm TL.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.