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15,519 results for “r”
The role of boundary length and adjacent patch contrast in guppy mate choice: Dataset, Matlab and R codes
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R-locus for roaned coat is associated with a tandem duplication in an intronic region of USH2A in dogs and also contributes to Dalmatian spotting
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Generalizable EHR-R-REDCap pipeline for a national multi-institutional rare tumor patient registry
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R script: Species coexist more easily if reinforcement is based on habitat preferences than on species recognition
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R code, spatial and tabular data to fully reproduce STEPS simulations of population change for common brushtail possum, grassland melomys and northern brown bandicoot in northern Australia
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Six subsets of all native vascular plant species of California used by Baldwin et al. (2017), and the R script to use to extract the subsets from the master spatial file
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Yield data for "Sanford, G. R. et.al. 2016. Comparative productivity of alternative cellulosic bioenergy cropping systems in the North Central USA. Agriculture, Ecosystems and Environment 216:344-355."
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R code for identification and correction of Photosynthetically Active Radiation sensor drift
R code was created to model maximum solar radiation and photosynthetically active radiation (PAR) based on location, date, temperature, atmospheric pressure and humidity. Additional code compares actual data with the predicted peaks in the solar radiation curves and identifies places where there is significant deviation from the predicted maximum and adjusts the output data to make it so that monthly peaks (assuming at least one day in the month was clear!) correspond to the predicted maximum. PAR is calculated as 45% of the solar radiation.
Figure 3 from: Hu R, Wei S, Liufu Y, Nong Y, Fang W (2019) Camellia debaoensis (Theaceae), a new species of yellow camellia from limestone karsts in southwestern China. PhytoKeys 135: 49-58. https://doi.org/10.3897/phytokeys.135.38756
Figure 3 Map showing distribution of Camellia debaoensis R.C.Hu & Y.Q.Liufu, sp. nov. in southwestern Guangxi, China.
Figure 2 from: Hu R, Wei S, Liufu Y, Nong Y, Fang W (2019) Camellia debaoensis (Theaceae), a new species of yellow camellia from limestone karsts in southwestern China. PhytoKeys 135: 49-58. https://doi.org/10.3897/phytokeys.135.38756
Figure 2 Camellia debaoensis R.C.Hu & Y.Q.Liufu, sp. nov. A habit B flowering branch C face view of flower D fruit, sepals and bracteoles E fruiting branch F pistil. Photographed by Renchuan Hu.
Figure 8 from: Yin M, Wingfield MJ, Zhou X, Linnakoski R, de Beer ZW (2019) Taxonomy and phylogeny of the Leptographium olivaceum complex (Ophiostomatales, Ascomycota), including descriptions of six new species from China and Europe. MycoKeys 60: 93-123. https://doi.org/10.3897/mycokeys.60.39069
Figure 8 Leptographium xiningense sp. nov. (CMW 38891) a fourteen-days old culture on OA with black background b synnematous asexual state on wood tissue on WAc conidiophore d conidiogenous apparatus e conidiogenous cells f conidia. Scale bars: 300 μm (b), 50 μm (c), 20 μm (d), 10 μm (e), 5 μm (f).
Supplementary material 2 from: Yin M, Wingfield MJ, Zhou X, Linnakoski R, de Beer ZW (2019) Taxonomy and phylogeny of the Leptographium olivaceum complex (Ophiostomatales, Ascomycota), including descriptions of six new species from China and Europe. MycoKeys 60: 93-123. https://doi.org/10.3897/mycokeys.60.39069
: Data type: phylogenetic data.
Figure 6 from: Yin M, Wingfield MJ, Zhou X, Linnakoski R, de Beer ZW (2019) Taxonomy and phylogeny of the Leptographium olivaceum complex (Ophiostomatales, Ascomycota), including descriptions of six new species from China and Europe. MycoKeys 60: 93-123. https://doi.org/10.3897/mycokeys.60.39069
Figure 6 Leptographium rhizoidum sp. nov. (CMW 22809). a fourteen-days old culture on OA with black background b synnematous asexual state on wood tissue on WAc conidiophore d conidiogenous apparatus e conidiogenous cells f conidia. Scale bars: 200 μm (b), 50 μm (c), 20 μm (d), 10 μm (e), 5 μm (f).
Supplementary material 1 from: Yin M, Wingfield MJ, Zhou X, Linnakoski R, de Beer ZW (2019) Taxonomy and phylogeny of the Leptographium olivaceum complex (Ophiostomatales, Ascomycota), including descriptions of six new species from China and Europe. MycoKeys 60: 93-123. https://doi.org/10.3897/mycokeys.60.39069
: Data type: phylogenetic data.
Figure 7 from: Yin M, Wingfield MJ, Zhou X, Linnakoski R, de Beer ZW (2019) Taxonomy and phylogeny of the Leptographium olivaceum complex (Ophiostomatales, Ascomycota), including descriptions of six new species from China and Europe. MycoKeys 60: 93-123. https://doi.org/10.3897/mycokeys.60.39069
Figure 7 Leptographium sylvestris sp. nov. (CMW 34140) a fourteen-days old culture on OA with black background b synnematous asexual state on wood tissue on WAc conidiophore d conidiogenous apparatus e conidiogenous cells f conidia g–h the sexual state on wood tissue on WAi ascoma j ostiolar hyphae k ascomatal base l ascospores. Scale bars: 100 μm (b), 50 μm (c), 25 μm (d), 10 μm (e), 5 μm (f), 100 μm (g), 100 μm (h), 50 μm (i), 25 μm (j), 20 μm (k), 5 μm (l).
Figure 4 from: Yin M, Wingfield MJ, Zhou X, Linnakoski R, de Beer ZW (2019) Taxonomy and phylogeny of the Leptographium olivaceum complex (Ophiostomatales, Ascomycota), including descriptions of six new species from China and Europe. MycoKeys 60: 93-123. https://doi.org/10.3897/mycokeys.60.39069
Figure 4 Leptographium conplurium sp. nov. (CMW 23315). a fourteen-days old culture on OA with black background; b. synnematous asexual state on wood tissue on WAc conidiophore d conidiogenous apparatus e conidiogenous cells f conidia. Scale bars: 200 μm (b), 50 μm (c), 20 μm (d), 10 μm (e), 5 μm (f).
Figure 3 from: Yin M, Wingfield MJ, Zhou X, Linnakoski R, de Beer ZW (2019) Taxonomy and phylogeny of the Leptographium olivaceum complex (Ophiostomatales, Ascomycota), including descriptions of six new species from China and Europe. MycoKeys 60: 93-123. https://doi.org/10.3897/mycokeys.60.39069
Figure 3 Leptographium breviuscapum sp. nov. (CMW 38888) a fourteen-days old culture on OA with black background b synnematous asexual state on wood tissue on WAc–d conidiophore e conidiogenous cells f conidia. Scale bars: 100 μm (b), 25 μm (c), 25 μm (d), 10 μm (e), 5 μm (f).
Figure 2 from: Yin M, Wingfield MJ, Zhou X, Linnakoski R, de Beer ZW (2019) Taxonomy and phylogeny of the Leptographium olivaceum complex (Ophiostomatales, Ascomycota), including descriptions of six new species from China and Europe. MycoKeys 60: 93-123. https://doi.org/10.3897/mycokeys.60.39069
Figure 2 ML trees of the L. olivaceum complex generated from DNA sequences of four protein-coding gene regions. Bold branches indicate posterior probabilities values ≥0.95. Bootstrap values ≥75% are recorded at nodes as ML/MP. * Bootstrap values <75%. Scale bar represents nucleotide substitutions.
Figure 1 from: Yin M, Wingfield MJ, Zhou X, Linnakoski R, de Beer ZW (2019) Taxonomy and phylogeny of the Leptographium olivaceum complex (Ophiostomatales, Ascomycota), including descriptions of six new species from China and Europe. MycoKeys 60: 93-123. https://doi.org/10.3897/mycokeys.60.39069
Figure 1 Left side: ML tree of the genus Leptographium generated from the ITS2-LSU DNA sequence data. Sequences generated from this study are printed in bold type. Bold branches indicate posterior probabilities values ≥0.95. Bootstrap values ≥75% are recorded at nodes as ML/MP. * Bootstrap values <75%. Scale bar represents 5 nucleotide substitutions per 100 nucleotides. Right side: ML trees of the L. olivaceum complex generated from the DNA sequences of combined four protein-coding gene regions, including ACT, CAL, TEF-1α, and TUB. Bold branches indicate posterior probabilities values ≥0.95. Bootstrap values ≥75% are recorded at nodes as ML/MP. * Bootstrap values <75%. Scale bar represents 5 nucleotide substitutions per 100 nucleotides.
Figure 5 from: Yin M, Wingfield MJ, Zhou X, Linnakoski R, de Beer ZW (2019) Taxonomy and phylogeny of the Leptographium olivaceum complex (Ophiostomatales, Ascomycota), including descriptions of six new species from China and Europe. MycoKeys 60: 93-123. https://doi.org/10.3897/mycokeys.60.39069
Figure 5 Leptographium pseudoalbum sp. nov. (CBS 276.54) a fourteen-days old culture on OA with black background; b. synnematous asexual state on wood tissue on WAc–d conidiophore e conidiogenous cells f conidia. Scale bars: 200 μm (b), 25 μm (c), 25 μm (d), 10 μm (e), 5 μm (f).
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.