Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
11,105
datasets available to search
ShareScore release 0.9.0
Dataset results
11,105 results for “single cells”
Single-cell chromatin and gene-regulatory dynamics of mouse nephron progenitors [ChIP-seq]
GEO Series GSE199928. Mus musculus. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Programmable transcript-specific enrichment for single-cell sequencing enables profiling of rare cell states
GEO Series GSE262355. Homo sapiens; Mus musculus. 23 samples. Type: Other; Expression profiling by high throughput sequencing.
Single-cell transcriptomic analysis of tissue resident memory T cells in human lung cancer [TCR-seq]
GEO Series GSE111897. Homo sapiens. 20 samples. Type: Other.
Single-cell RNA-sequencing of mouse colonic monocytes and macrophages (chow vs. high fat diet)
GEO Series GSE143351. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Single cell sequencing identifies novel sub-populations of breast cancer cells selected under hypoxia
GEO Series GSE134038. Homo sapiens. 384 samples. Type: Expression profiling by high throughput sequencing.
Single cell transcriptomic and spatial landscapes of the developing human pancreas
GEO Series GSE197064. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
IRF5 promotes intestinal inflammation by guiding monocyte differentiation towards pathogenic CD11c+ macrophage phenotype [single_cell_rnaseq]
GEO Series GSE129256. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Long-term effects of Elastase inhibition on human islets at single-cell resolution
GEO Series GSE190447. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Tracing the temporal-spatial transcriptomic landscapes of the human fetal digestive tract by single cell RNA-seq analysis [fetal tissues]
GEO Series GSE95630. Homo sapiens. 445 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome sequencing of macrophages in acute kidney injury(AKI) to chronic kidney dieases(CKD)
GEO Series GSE239287. Mus musculus. 17 samples. Type: Expression profiling by high throughput sequencing.
Systematic comparison of high-throughput single-cell RNA-seq methods for immune cell profiling
GEO Series GSE163793. Homo sapiens; Mus musculus. 27 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic analysis demonstrates decreased TNF signaling in patients receiving BAF312 during intracerebral hemorrhage
GEO Series GSE313043. Homo sapiens. 22 samples. Type: Expression profiling by high throughput sequencing; Other.
Ultra high-throughput single-cell transcriptome and epitope profiling of healthy human PBMCs using SCITO-seq2
GEO Series GSE282881. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing; Other.
Single cell sequencing of the hippocampal niche
GEO Series GSE106447. Mus musculus. 33 samples. Type: Expression profiling by high throughput sequencing.
Single Cell RNA-Sequencing Identifies ferroptotic differences of alveolar macrophages in COPD
GEO Series GSE227691. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
FoxA1 and FoxA2 are required for gastric differentiation in NKX2-1-negative lung adenocarcinoma [single cell analysis]
GEO Series GSE115900. Mus musculus. 134 samples. Type: Expression profiling by high throughput sequencing.
Stepwise cell fate decision pathways during osteoclastogenesis at single-cell resolution
GEO Series GSE147174. Mus musculus. 17 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq of bone marrow-derived mesenchymal stem cells reveals unique profiles of lineage priming
GEO Series GSE70930. Mus musculus. 23 samples. Type: Expression profiling by high throughput sequencing.
Single cell RNA sequencing reveals transcriptional changes of human choroid and retinal pigment epithelium cells during development, in healthy adult and intermediate age-related macular degeneration
GEO Series GSE210543. Homo sapiens. 13 samples. Type: Expression profiling by high throughput sequencing.
MARS-seq2.0 an experimental and analytical pipeline for indexed sorting combined with Single-cell RNA sequencing
GEO Series GSE123392. Mus musculus; Homo sapiens. 30 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.