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4,144 results for “ITS barcode”
Supplementary material 3 from: Fišer C, Alther R, Zakšek V, Borko Š, Fuchs A, Altermatt F (2018) Translating Niphargus barcodes from Switzerland into taxonomy with a description of two new species (Amphipoda, Niphargidae). ZooKeys 760: 113-141. https://doi.org/10.3897/zookeys.760.24978
Table S3. List of new records of Niphargus from Switzerland :
Figure 6 from: Guimarães EC, De Brito PS, Feitosa LM, Carvalho-Costa LF, Ottoni FP (2018) A new species of Hyphessobrycon Durbin from northeastern Brazil: evidence from morphological data and DNA barcoding (Characiformes, Characidae). ZooKeys 765: 79-101. https://doi.org/10.3897/zookeys.765.23157
Figure 6 Bayesian phylogenetic tree including Hyphessobrycon piorskii sp. n (in red) and other congeners. Number above branches are posterior probability values.
Figure 7 from: Guimarães EC, De Brito PS, Feitosa LM, Carvalho-Costa LF, Ottoni FP (2018) A new species of Hyphessobrycon Durbin from northeastern Brazil: evidence from morphological data and DNA barcoding (Characiformes, Characidae). ZooKeys 765: 79-101. https://doi.org/10.3897/zookeys.765.23157
Figure 7 Geographical distribution of Hyphessobrycon piorskii sp. n. Red circle denote Holotype and black circle denote paratypes.
Figure 3 from: Guimarães EC, De Brito PS, Feitosa LM, Carvalho-Costa LF, Ottoni FP (2018) A new species of Hyphessobrycon Durbin from northeastern Brazil: evidence from morphological data and DNA barcoding (Characiformes, Characidae). ZooKeys 765: 79-101. https://doi.org/10.3897/zookeys.765.23157
Figure 3 Hyphessobrycon piorskii sp. n. CICCAA 00697, 19.3 mm SL; jaw suspensory: A Premaxillary. B Maxilla C Dentary (Photographed by Erick Guimarães).
Figure 1 from: Guimarães EC, De Brito PS, Feitosa LM, Carvalho-Costa LF, Ottoni FP (2018) A new species of Hyphessobrycon Durbin from northeastern Brazil: evidence from morphological data and DNA barcoding (Characiformes, Characidae). ZooKeys 765: 79-101. https://doi.org/10.3897/zookeys.765.23157
Figure 1 Hyphessobrycon piorskii sp. n. A CICCAA 00695, holotype, 25.9 mm SL, Brazil: Maranhão State: Munim River basin B CICCAA 00881, paratype, 29.4 mm SL, Brazil: Maranhão State: Munim River basin (photographed by Felipe Ottoni).
Figure 2 from: Guimarães EC, De Brito PS, Feitosa LM, Carvalho-Costa LF, Ottoni FP (2018) A new species of Hyphessobrycon Durbin from northeastern Brazil: evidence from morphological data and DNA barcoding (Characiformes, Characidae). ZooKeys 765: 79-101. https://doi.org/10.3897/zookeys.765.23157
Figure 2 Hyphessobrycon piorskii sp. n. A CICCAA 00698, paratype, 26.9 mm SL, Brazil: Maranhão State: Munim River basin; living specimen photographed immediately after collection B CICCAA 00089, paratype, 25.2 mm SL, Brazil: Maranhão State: Munim River basin; living specimen photographed immediately after collection (photographed by Felipe Ottoni).
Figure 5 from: Guimarães EC, De Brito PS, Feitosa LM, Carvalho-Costa LF, Ottoni FP (2018) A new species of Hyphessobrycon Durbin from northeastern Brazil: evidence from morphological data and DNA barcoding (Characiformes, Characidae). ZooKeys 765: 79-101. https://doi.org/10.3897/zookeys.765.23157
Figure 5 Hyphessobrycon piorskii sp. n. CICCAA 00697, male, 19.3 mm SL, bony hooks on pelvic fin (photographed by Erick Guimarães).
Figure 8 from: Guimarães EC, De Brito PS, Feitosa LM, Carvalho-Costa LF, Ottoni FP (2018) A new species of Hyphessobrycon Durbin from northeastern Brazil: evidence from morphological data and DNA barcoding (Characiformes, Characidae). ZooKeys 765: 79-101. https://doi.org/10.3897/zookeys.765.23157
Figure 8 Collecting sites of Hyphessobrycon piorskii sp. n. A stream at the Anapurus municipality B stream at Mata de Itamacaoca C stream at Mata de Itamacaoca D stream at Mata Fome, Barreirinhas municipality (photographed by Felipe Ottoni).
Figure 4 from: Guimarães EC, De Brito PS, Feitosa LM, Carvalho-Costa LF, Ottoni FP (2018) A new species of Hyphessobrycon Durbin from northeastern Brazil: evidence from morphological data and DNA barcoding (Characiformes, Characidae). ZooKeys 765: 79-101. https://doi.org/10.3897/zookeys.765.23157
Figure 4 Hyphessobrycon piorskii sp. n. CICCAA 00697, male, 19.3 mm SL, bony hooks on anal fin (photographed by Erick Guimarães).
FIGURE 4 in Application of DNA Barcoding in the Classification of Grasshoppers (Orthoptera: Acridoidea) - A Case Study of grasshoppers from Hebei Province, China
FIGURE 4. Variation in the number of MOTUs defined at 0 to50 cut-off values for DNA barcoding
Supplementary material 5 from: Cahoon AB, Huffman AG, Krager MM, Crowell RM (2018) A meta-barcoding census of freshwater planktonic protists in Appalachia – Natural Tunnel State Park, Virginia, USA. Metabarcoding and Metagenomics 2: e26939. https://doi.org/10.3897/mbmg.2.26939
Table 3. Diversity Indices. :
Supplementary material 3 from: Cahoon AB, Huffman AG, Krager MM, Crowell RM (2018) A meta-barcoding census of freshwater planktonic protists in Appalachia – Natural Tunnel State Park, Virginia, USA. Metabarcoding and Metagenomics 2: e26939. https://doi.org/10.3897/mbmg.2.26939
Table 1. All Detected Taxa :
Supplementary material 1 from: Cahoon AB, Huffman AG, Krager MM, Crowell RM (2018) A meta-barcoding census of freshwater planktonic protists in Appalachia – Natural Tunnel State Park, Virginia, USA. Metabarcoding and Metagenomics 2: e26939. https://doi.org/10.3897/mbmg.2.26939
Figure 1. Sample collection sites :
Figure 7 from: Constantinescu IC, Popa OP, Popa LO, Cobzaru I, Khlur B MD, Adam C (2018) A new feather mite species of the genus Trouessartia Canestrini, 1899 (Acarina, Trouessartiidae) – an integrative description (morphology and DNA barcoding data). ZooKeys 789: 19-35. https://doi.org/10.3897/zookeys.789.27829
Figure 7 Evolutionary relationship between Trouessartia species inferred using the Neighbor-Joining method. The bootstrap test result (10000 replicates) is shown next to each branch.
Supplementary material 6 from: Cahoon AB, Huffman AG, Krager MM, Crowell RM (2018) A meta-barcoding census of freshwater planktonic protists in Appalachia – Natural Tunnel State Park, Virginia, USA. Metabarcoding and Metagenomics 2: e26939. https://doi.org/10.3897/mbmg.2.26939
Table 4. The protist genera identified in Natural Tunnel State Park organised by read count. :
Figure 6 from: Constantinescu IC, Popa OP, Popa LO, Cobzaru I, Khlur B MD, Adam C (2018) A new feather mite species of the genus Trouessartia Canestrini, 1899 (Acarina, Trouessartiidae) – an integrative description (morphology and DNA barcoding data). ZooKeys 789: 19-35. https://doi.org/10.3897/zookeys.789.27829
Figure 6 Trouessartianiltavae Constantinescu, sp. n., A–D details of female legs, dorsal view: A–leg I, B–leg II, C–leg III, D–leg IV; E–spermatheca and spermaducts of female; Abbreviations: hs – head of spermatheca; pd – primary spermaduct; sd – secondary spermaduct.
Figure 8 from: Constantinescu IC, Popa OP, Popa LO, Cobzaru I, Khlur B MD, Adam C (2018) A new feather mite species of the genus Trouessartia Canestrini, 1899 (Acarina, Trouessartiidae) – an integrative description (morphology and DNA barcoding data). ZooKeys 789: 19-35. https://doi.org/10.3897/zookeys.789.27829
Figure 8 Evolutionary relationship between Trouessartia species inferred using the Maximum Likelihood method based on the Tamura-Nei model. The bootstrap test (10000 replicates) shown next to the branches.
Figure 3 from: Constantinescu IC, Popa OP, Popa LO, Cobzaru I, Khlur B MD, Adam C (2018) A new feather mite species of the genus Trouessartia Canestrini, 1899 (Acarina, Trouessartiidae) – an integrative description (morphology and DNA barcoding data). ZooKeys 789: 19-35. https://doi.org/10.3897/zookeys.789.27829
Figure 3 Trouessartianiltavae Constantinescu, sp. n., A–D details of male legs, dorsal view: A–leg I, B–leg II, C–leg III, D–leg IV; E–opisthosoma of male, ventral view. Abbreviations: bs – basal sclerite, ea – epiandrum, gp – genital papillae, pm – parameres, pp – postgenital plaque.
Supplementary material 4 from: Cahoon AB, Huffman AG, Krager MM, Crowell RM (2018) A meta-barcoding census of freshwater planktonic protists in Appalachia – Natural Tunnel State Park, Virginia, USA. Metabarcoding and Metagenomics 2: e26939. https://doi.org/10.3897/mbmg.2.26939
Table 2. Primers and PCR Conditions. :
Figure 6 from: Jochum A, Ruthensteiner B, Kampschulte M, Martels G, Kneubühler J, Favre A (2018) Fulfilling the taxonomic consequence after DNA Barcoding: Carychium panamaense sp. n. (Eupulmonata, Ellobioidea, Carychiidae) from Panama is described using computed tomographic (CT) imaging. ZooKeys 795: 1-12. https://doi.org/10.3897/zookeys.795.29339
Figure 6 Type locality of Carychiumpanamaense sp. n., A El Retoño Trail, La Amistad International Park, Cerro Punta, Chiriquí Prov., Panama B broadleaf forest litter with white arrows indicating C.panamaense sp. n. on leaves C–D close-up view of live individuals crawling on leaf.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.