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486
datasets available to search
ShareScore release 0.9.0
Dataset results
486 results for “Curation”
Gene expression profile prospectively predicts peritoneal relapse after curative surgery of gastric cancer
GEO Series GSE15081. Homo sapiens. 141 samples. Type: Expression profiling by array.
Nutritional Genomics Uncovers Vitamin B3 Therapy as Curative for NAXD Disease
GEO Series GSE304377. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Comprehensive curation and validation of genomic datasets for chestnut
GEO Series GSE284518. Castanea mollissima. 1 samples. Type: Expression profiling by high throughput sequencing; Third-party reanalysis.
Eomesodermin+ CD4 T cells are critical for curative immunotherapy outcomes
GEO Series GSE305683. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Comprehensive curation and validation of genomic datasets for chestnut [2]
GEO Series GSE284516. Castanea mollissima. 18 samples. Type: Expression profiling by high throughput sequencing; Third-party reanalysis.
Gene expression profiling of formalin fixed paraffin embedded tumor tissue identifies gastric cancer patients who are at high risk after curative surgery plus adjuvant chemoradiotherapy
GEO Series GSE26253. Homo sapiens. 432 samples. Type: Expression profiling by array.
Sculpting the tumour microenvironment by combining radiotherapy and ATR inhibition for curative-intent adjuvant immunotherapy
GEO Series GSE267158. Mus musculus. 48 samples. Type: Expression profiling by high throughput sequencing.
Comprehensive curation and validation of genomic datasets for chestnut [3]
GEO Series GSE284517. Castanea mollissima. 6 samples. Type: Expression profiling by high throughput sequencing; Third-party reanalysis.
Comprehensive curation and validation of genomic datasets for chestnut [1]
GEO Series GSE284510. Castanea mollissima. 7 samples. Type: Expression profiling by high throughput sequencing; Third-party reanalysis.
Figure 4 from: Bonello G, Grillo M, Cecchetto M, Giallain M, Granata A, Guglielmo L, Pane L, Schiaparelli S (2020) Distributional records of Ross Sea (Antarctica) planktic Copepoda from bibliographic data and samples curated at the Italian National Antarctic Museum (MNA): checklist of species collected in the Ross Sea sector from 1987 to 1995. ZooKeys 969: 1-22. https://doi.org/10.3897/zookeys.969.52334
Figure 4 Taxonomic diversity for museum vouchers.
Figure 3 from: Bonello G, Grillo M, Cecchetto M, Giallain M, Granata A, Guglielmo L, Pane L, Schiaparelli S (2020) Distributional records of Ross Sea (Antarctica) planktic Copepoda from bibliographic data and samples curated at the Italian National Antarctic Museum (MNA): checklist of species collected in the Ross Sea sector from 1987 to 1995. ZooKeys 969: 1-22. https://doi.org/10.3897/zookeys.969.52334
Figure 3 Taxonomic diversity for data report analysis.
Figure 2 from: Bonello G, Grillo M, Cecchetto M, Giallain M, Granata A, Guglielmo L, Pane L, Schiaparelli S (2020) Distributional records of Ross Sea (Antarctica) planktic Copepoda from bibliographic data and samples curated at the Italian National Antarctic Museum (MNA): checklist of species collected in the Ross Sea sector from 1987 to 1995. ZooKeys 969: 1-22. https://doi.org/10.3897/zookeys.969.52334
Figure 2 Flowchart representing all stages in dataset development and publishing.
Figure 3 from: Cecchetto M, Alvaro MC, Ghiglione C, Guzzi A, Mazzoli C, Piazza P, Schiaparelli S (2017) Distributional records of Antarctic and sub-Antarctic Ophiuroidea from samples curated at the Italian National Antarctic Museum (MNA): check-list update of the group in the Terra Nova Bay area (Ross Sea) and launch of the MNA 3D model 'virtual gallery'. ZooKeys 705: 61-79. https://doi.org/10.3897/zookeys.705.13712
Figure 3 - Map of the Ross Sea sampling locations.
Mare-MAGE database A curated reference database of fish mitochondrial genes
<div> <p>Biodiversity assessment approaches based on molecular biology techniques such as NGS, metabarcoding, RAD-seq, or SnaPshot sequencing, are increasingly used in assessing marine and aquatic ecosystems. In this study, we present a new reference database for fish meta-barcoding based on mitochondrial genes. The <strong><em>Mare-MAGE</em></strong> database contains quality-checked sequences of the mitochondrial genes for 12S ribosomal RNA and Cytochrome c Oxidase I. All sequences were obtained from the National Center for Biotechnology Information- GenBank (NBCI-GenBank) and the European Nucleotide Archive (ENA) and have undergone intensive processing. They were checked for false annotations and non-target anomalies, according to the Integrated Taxonomic Information System (ITIS) and FishBase. The dataset is compiled in ARB-Home, FASTA and Qiime2 formats, and is publicly available from the <strong><em>Mare-MAGE</em></strong> database website (<a href="http://mare-mage.weebly.com/">http://mare-mage.weebly.com/</a> and <a href="https://figshare.com/projects/MARE-MAGE_database_Fish/90917">https://figshare.com/projects/MARE-MAGE_database_Fish/90917</a>). It includes altogether 231,333 COI and 12S rRNA gene sequences of fish covering 19,506 species of 4,058 genera and 586 families.</p> </div> <div> <div> </div> </div>
Curated monomers for Virtual Forward Synthesis (VFS)
<p>This data set (named "monomers.pkl") of molecules was used to generate the hypothetical polymers stored in https://github.com/Ramprasad-Group/polyverse-structures. This data set is derived from the union of the ZINC15 and ChEMBL databases. The data set was created using the following rules: (1) select the molecules that are readily purchasable (2) select the molecules that have standard reactivity (3) strip counterions and chirality (4) Use the SAscore to remove complex molecules.</p> <p>The data set contains 7,754,881 entries. It contains two columns: "index" and "id-smiles". Each entry in "index" is an integer, starting from 0. Each entry in "id-smiles" is a tuple. The first element of the tuple is an ID (either the ZINC15 ID or the ChEMBL ID). The second element of the tuple is the processed SMILES string.</p>
Figure 1 from: Mantle B, LaSalle J, Fisher N (2012) Whole-drawer imaging for digital management and curation of a large entomological collection. ZooKeys 209: 147-163. https://doi.org/10.3897/zookeys.209.3169
Figure 1 - The SatScan imaging system used in ANIC. Shown here with the front cover removed.
Curated Dataset of Association Constants Between a Cyclodextrin and a Guest for Machine Learning
<p>Determining the association constant between a cyclodextrin and a guest molecule is an important task for various applications in various industrial and academical fields. However, such a task is time consuming, tedious and requires samples of both molecules. A significant number of association constants and relevant data is available from the literature. The availability of data makes the use of machine learning techniques to predict association constants possible. However, such data is mainly available from tables in articles or appendices. It is necessary to make them available in a computer friendly format and to curate them. Furthermore, the raw data need to be enriched with physicochemical information about each molecule and when such information does not allow to discriminate molecules, some additional data is needed. We present a dataset built from data gathered from the literature.</p>
Curative Versus Disease-Modifying Therapies in Children With Severe Sickle Cell Disease
ClinicalTrials.gov study NCT01369160. IPD Sharing: Not stated. Countries: 1. Publications: 0.
A Study, Combination, Immunologic Study of LTX-315 as Adjunct to GV1001 in Patients Following Curative Surgery for Carcinoma
ClinicalTrials.gov study NCT01223209. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Neoadjuvant Durvalumab/Anlotinib /Chemotherapy Plus Curative Resection in Stage III Non-Small-Cell Lung Cancer : A Single-arm Phase II Study
ClinicalTrials.gov study NCT04762030. IPD Sharing: NO. Countries: 1. Publications: 0.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.