Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
308
datasets available to search
ShareScore release 0.9.0
Dataset results
308 results for “fungal community”
Data from: Effects of two grass species on the composition of soil fungal communities
Open the record for dataset details and reuse information.
Data from: Gut bacterial and fungal communities in ground-dwelling beetles are associated with host food habit and habitat
Beetles (Coleoptera) have the highest species diversity among all orders, and they have diverse food habits. Gut microbes may have contributed to this diversification of food habits. Here, we identified the pattern of the relationship between ground-dwelling beetles and their gut microbial communities (bacteria and fungi) in the field. We collected 46 beetle species of five families from secondary deciduous forests and grasslands in Japan and extracted microbial DNA from whole guts for amplicon sequencing. The gut bacterial and fungal communities differed among all habitats and all food habits of their hosts (carnivores, herbivores, omnivores, and scavengers) except for the fungal communities between carnivores and scavengers. Specifically, the abundant bacterial group varied among food habits: Xanthomonadaceae were abundant in scavengers, whereas Enterobacteriaceae were abundant in carnivores and herbivores. Phylogenetically closely related beetles had phylogenetically similar communities of Enterobacteriaceae, suggesting that the community structure of this family is related to the evolutionary change in beetle ecology. One of the fungal groups, Yarrowia species, which has been reported to have a symbiotic relationship with silphid beetles, was also detected from various carnivorous beetles. Our results suggest that the symbiotic relationships between ground-dwelling beetles and these microbes are widespread.
Data from: Gut bacterial and fungal communities in ground-dwelling beetles are associated with host food habit and habitat
Open the record for dataset details and reuse information.
GeoChip data from fungal community in Alaskan tundra soil
GEO Series GSE127899. soil metagenome; Fungi. 12 samples. Type: Genome variation profiling by array.
Local adaptation of a fungal pathogen introduced into a soil community
GEO Series GSE30175. Metarhizium anisopliae; Metarhizium robertsii. 20 samples. Type: Expression profiling by array.
Contrasting biogeography of fungal communities associated with roots versus soils and the role of root morphology in mycobiome assembly in coast redwood, Sequoia sempervirens
Open the record for dataset details and reuse information.
Transcriptomic analyses of bacterial growth on fungal necromass reveals different microbial community niches during degradation
GEO Series GSE268149. Serratia marcescens; Chitinophaga pinensis; Cellvibrio japonicus. 48 samples. Type: Expression profiling by high throughput sequencing.
Landscape structure of bacterial and fungal community composition in the West Nile Virus vector, Culex tarsalis
<p>Raw data sequence for bacteria (16S v3v4 region)</p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.