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409
datasets available to search
ShareScore release 0.9.0
Dataset results
409 results for “genome organization”
3D genome organization in the epithelial-mesenchymal transition spectrum [scHi-C_PEO1HEYA8]
GEO Series GSE201917. Homo sapiens. 24 samples. Type: Other.
Genome Organization Drives Chromosome Fragility [nsRNA-seq]
GEO Series GSE99196. Mus musculus. 11 samples. Type: Other.
Differential roles of positive and negative supercoiling in organizing the E. coli genome
GEO Series GSE214856. Escherichia coli str. K-12 substr. MG1655. 2 samples. Type: Other.
3D genome organization in the epithelial-mesenchymal transition spectrum [Hi-C]
GEO Series GSE201878. Homo sapiens. 4 samples. Type: Other.
Chromatin states and genomic organization impact local replication features and timing [Repli-seq]
GEO Series GSE175751. Homo sapiens. 28 samples. Type: Other.
3D genome organization during TGFB-induced transcription requires nuclear microRNA and G-quadruplexes [Cut&Tag]
GEO Series GSE273972. Mus musculus. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Histone deacetylation and cytosine methylation are required for the normal compartmentalization of heterochromatin in the genome organization of Neurospora crassa [ChIP-Seq]
GEO Series GSE232933. Neurospora crassa. 19 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Tunable DNMT1 degradation reveals cooperation of DNMT1 and DNMT3B in regulating DNA methylation dynamics and genome organization (ChIP-Seq).
GEO Series GSE251932. Homo sapiens. 7 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
SATB2 organizes the 3D genome architecture of cognition in cortical neurons
GEO Series GSE222609. Mus musculus. 34 samples. Type: Other; Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Heterochromatic 3D genome organization is directed by HP1a and H3K9-dependent and independent mechanisms[FAIRE-seq]
GEO Series GSE236965. Drosophila melanogaster. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Doxorubicin Changes the Spatial Organization of the Genome around Active Promoters
GEO Series GSE214912. Homo sapiens. 4 samples. Type: Other.
Chromosome-level organization of the regulatory genome in the Drosophila nervous system [Hi-C]
GEO Series GSE214704. Drosophila virilis; Drosophila melanogaster. 30 samples. Type: Other.
Three-dimensional analysis of genome organization in CTCF-WT and CTCF-KO dendritic cells (HiChIP II)
GEO Series GSE215044. Mus musculus. 8 samples. Type: Other.
Extensive Heterogeneity and Intrinsic Variation in Spatial Genome Organization
GEO Series GSE107051. Homo sapiens. 4 samples. Type: Other.
Loss of a heterochromatin anchor rescues altered genome organization and EDMD muscle defects triggered by a laminopathy mutation
GEO Series GSE136577. Caenorhabditis elegans. 32 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
A role for TFIIIC transcription factor complex in genome organization
GEO Series GSE4555. Schizosaccharomyces pombe. 4 samples. Type: Genome binding/occupancy profiling by genome tiling array.
Neuronal Activity Suppresses NEUROD-Dependent Transcription and Genome Organization [ChIP-Seq]
GEO Series GSE310749. Mus musculus. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Stage-resolved genome architecture maps throughout meiotic prophase link regional variations in chromosome organization with homolog alignment
GEO Series GSE155638. Mus musculus. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Three-dimensional analysis of genome organization in CTCF-WT and CTCF-KO dendritic cells (RNA-Seq II)
GEO Series GSE215043. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
3D genome organization during TGFB-induced transcription requires nuclear microRNA and G-quadruplexes [ChIRP_seq]
GEO Series GSE244949. Mus musculus. 2 samples. Type: Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.