Find research datasets worth reusing

FIGURE 12 in An inventory of the names of native, non-endemic vascular plants described from Italy, their loci classici and types

FIGURE 12. Lectotype of the name Salvia sclarea L., "In hortis passim, Florentia sponte" Herb. Burser XIII: 108 (UPS). Reproduced under the terms of the Creative Commons Attribution License [CC BY 4.0] (http://creativecommons.org/ licenses/by/4.0), Museum of Evolution, Uppsala University.

FIGURE 13 in An inventory of the names of native, non-endemic vascular plants described from Italy, their loci classici and types

FIGURE 13. Lectotype (designated here) of the name Saponaria bellidifolia Sm., "Globularia lutea montana" in Colonna, Ekphrasis: 153. 1606.

FIGURE 6 in An inventory of the names of native, non-endemic vascular plants described from Italy, their loci classici and types

FIGURE 6. Lectotype of the name Digitalis ferruginea L., "In Italia sponte, autem [...], Lipsii in horti" Herb. Burser XIII: 164 (UPS). Reproduced under the terms of the Creative Commons Attribution License [CC BY 4.0] (http:// creativecommons.org/licenses/by/4.0), Museum of Evolution, Uppsala University.

FIGURE 3 in An inventory of the names of native, non-endemic vascular plants described from Italy, their loci classici and types

FIGURE 3. Lectotype of the name Centaurea collina L., "in alpibus passim" Herb. Burser XV(2): 35 (UPS). Reproduced under the terms of the Creative Commons Attribution License [CC BY 4.0] (http://creativecommons. org/licenses/by/4.0), Museum of Evolution, Uppsala University.

FIGURE 5 in An inventory of the names of native, non-endemic vascular plants described from Italy, their loci classici and types

FIGURE 5. Lectotype of the name Cytisus nigricans L., "In Austria, Bohemia, Italia" Herb. Burser XXII: 11, left specimen (UPS). Reproduced under the terms of the Creative Commons Attribution License [CC BY 4.0] (http:// creativecommons.org/licenses/by/4.0), Museum of Evolution, Uppsala University.

FIGURE 2 in An inventory of the names of native, non-endemic vascular plants described from Italy, their loci classici and types

FIGURE 2. Lectotype of the name Andryala integrifolia L., "In [...] locis" Herb. Burser VI: 57 (UPS). Reproduced under the terms of the Creative Commons Attribution License [CC BY 4.0] (http://creativecommons.org/licenses/ by/4.0), Museum of Evolution, Uppsala University.

FIGURE 8 in An inventory of the names of native, non-endemic vascular plants described from Italy, their loci classici and types

FIGURE 8. Lectotype of the name Juniperus sabina L., "Basileae in horto [...]" Herb. Burser XXV: 59 (UPS). Reproduced under the terms of the Creative Commons Attribution License [CC BY 4.0] (http://creativecommons. org/licenses/by/4.0), Museum of Evolution, Uppsala University.

FIGURE 1 in An inventory of the names of native, non-endemic vascular plants described from Italy, their loci classici and types

FIGURE 1. Lectotype of the name Allium subhirsutum L., "Parisiis in horto [...], Basileae in horto [...]" Herb. Burser III: 109 (UPS). Reproduced under the terms of the Creative Commons Attribution License [CC BY 4.0] (http:// creativecommons.org/licenses/by/4.0), Museum of Evolution, Uppsala University.

FIGURE 7 in An inventory of the names of native, non-endemic vascular plants described from Italy, their loci classici and types

FIGURE 7. Lectotype of the name Andropogon hirtus L., "In Italia" Herb. Burser I: 119 (UPS). Reproduced under the terms of the Creative Commons Attribution License [CC BY 4.0] (http://creativecommons.org/licenses/by/4.0), Museum of Evolution, Uppsala University.

FIGURE 4 in An inventory of the names of native, non-endemic vascular plants described from Italy, their loci classici and types

FIGURE 4. Lectotype of the name Cistus salviifolius L., "Florentiae ut Monspellii horti" Herb. Burser, XXIV: 54 (UPS). Reproduced under the terms of the Creative Commons Attribution License [CC BY 4.0] (http://creativecommons.org/ licenses/by/4.0), Museum of Evolution, Uppsala University.

FIGURE 11 in An inventory of the names of native, non-endemic vascular plants described from Italy, their loci classici and types

FIGURE 11. Lectotype of the name Ruscus aculeatus L., "Monspellii ut Florentiae sponte" Herb. Burser XXIV: 91 (UPS). Reproduced under the terms of the Creative Commons Attribution License [CC BY 4.0] (http://creativecommons. org/licenses/by/4.0), Museum of Evolution, Uppsala University.

FIGURE 10 in An inventory of the names of native, non-endemic vascular plants described from Italy, their loci classici and types

FIGURE 10. Lectotype of the name Oxalis corniculata L., "Florentiae horti" Herb. Burser XVIII(2): 60 (UPS). Reproduced under the terms of the Creative Commons Attribution License [CC BY 4.0] (http://creativecommons. org/licenses/by/4.0), Museum of Evolution, Uppsala University.

FIGURE 14 in An inventory of the names of native, non-endemic vascular plants described from Italy, their loci classici and types

FIGURE 14. Lectotype of the name Scandix australis L., "Basileae ut Pisis in horti" Herb. Burser VII(2): 49 (UPS). Reproduced under the terms of the Creative Commons Attribution License [CC BY 4.0] (http://creativecommons. org/licenses/by/4.0), Museum of Evolution, Uppsala University.

opencc-by-4.0Sep 2024View details →

61 taxa and 2399 loci alignment of phylodiverse Klebsormidiophyceae trimmed gene-wise with clipkit

Open the record for dataset details and reuse information.

opencc-by-4.0Sep 2024View details →

Identification of genetic loci and functional analysis of candidate gene, OsCycB1;5 associated with seed callus induction in rice (Oryza sativa L.)

Open the record for dataset details and reuse information.

opencc-zeroDec 2011View details →

Data from: Loci controlling nitrate reductase activity in maize: ultraviolet-B signaling in aerial tissues increases nitrate reductase activity in leaf and root when responsive alleles are present

Environmental factors, such as ultraviolet-B (UV-B) irradiation, have the ability to affect pathways such as nitrogen metabolism. As fixed nitrogen is the keystone mineral nutrient that controls grain crop yield, any alteration in this cycle can be detrimental to plant productivity. Nitrate reductase enzyme activity is responsible for the reduction of nitrate to nitrite, and nitrate is the major form of nitrogen assimilated in plants. In maize (Zea mays L.) production, nitrate assimilation kinetics are important for both high- and low-input agricultural systems. Nitrate reductase protein activity is controlled by phosphatases and kinases. Nitrate reductase activity is responsive to environmental signals such as light–dark cycles and UV-B radiation, although the regulatory controls are not yet fully understood. We have determined the location of maize genetic factors that control nitrate reductase activity and the extent of contribution of each of these factors, both locally in the leaf tissue and via long-distance signaling loci that affect root nitrate reductase activity upon leaf UV irradiation. In the IBM94 recombinant inbred mapping population, the loci controlling regulation of nitrate reductase activity under UV-B map to different positions than the loci controlling nitrate reductase activity in unexposed plants.

opencc-zeroDec 2009View details →

Data from: Evaluation of candidate DNA barcoding loci for economically important timber species of the mahogany family (Meliaceae)

There has been considerable debate regarding locus choice for DNA barcoding land plants. This is partly attributable to a shortage of comparable data from proposed candidate loci on a common set of samples. In this study, we evaluated main candidate plastid regions (rpoC1, rpoB, accD) and additional plastid markers (psbB, psbN, psbT exons and the trnS-trnG spacer) as well as the nuclear ribosomal spacer region (ITS1-5.8S-ITS2) in a group of land plants belonging to the mahogany family, Meliaceae. Across these samples, only ITS showed high levels of resolvability. Interspecific sharing of sequences from individual plastid loci was common. The combination of multiple loci did not improve performance. DNA barcoding with ITS alone revealed cryptic species and proved useful in identifying species listed in Convention on International Trade of Endangered Species appendixes.

opencc-zeroDec 2016View details →

Data from: Stabilising selection on microsatellite allele length at arginine vasopressin 1a receptor and oxytocin receptor loci

The loci arginine vasopressin receptor 1a (avpr1a) and oxytocin receptor (oxtr) have evolutionarily conserved roles in vertebrate social and sexual behavior. Allelic variation at a microsatellite locus in the 5' regulatory region of these genes is associated with fitness in the bank vole Myodes glareolus. Given the low frequency of long and short alleles at these microsatellite loci in wild bank voles, we used breeding trials to determine whether selection acts against long and short alleles. Female bank voles with intermediate length avpr1a alleles had the highest probability of breeding, while male voles whose avpr1a alleles were very different in length had reduced probability of breeding. Moreover, there was a significant interaction between male and female oxtr genotypes, where potential breeding pairs with dissimilar length alleles had reduced probability of breeding. These data show how genetic variation at microsatellite loci associated with avpr1a and oxtr is associated with fitness, and highlight complex patterns of selection at these loci. More widely, these data show how stabilising selection might act on allele length frequency distributions at gene-associated microsatellite loci.

opencc-zeroDec 2013View details →

Data from: A set of plastid loci for use in multiplex fragment length genotyping for intraspecific variation in Pinus (Pinaceae)

Premise of the study: Recently released Pinus plastome sequences support characterization of 15 plastid Simple Sequence Repeat (ptSSR) loci originally published for P. contorta and P. thunbergii. This allows selection of loci for single-tube PCR multiplexed genotyping in any subsection of the genus. Methods: Unique placement of primers and primer conservation across the genus were investigated, and a set of six loci were selected for single-tube multiplexing. We compare interspecific variation between ptSSRs and nucleotide sequences of ycf1 then test intraspecific variation for ptSSRs using 911 samples in the P. ponderosa species complex. Results: The ptSSR loci contain mononucleotide and complex repeats with additional length variation in flanking regions. They are not located in hypervariable regions and most primers are conserved across the genus. A single PCR per sample multiplexed for six loci yielded 45 alleles in 911 samples. Discussion: The protocol allows efficient genotyping of many samples. The ptSSR loci are too variable for Pinus phylogenies but are useful for the study of genetic structure within and among populations. The multiplex method could easily be extended to other plant groups by choosing primers for ptSSR loci in a plastome alignment for the target group.