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3,684
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3,684 results for “extract”
A comparison of transcriptome between Drosophila S2R+ cell line cultured in M3 media supplemented with fly extract and S2R+ cell line cultured in M3 + BPYE + 10% FCS
GEO Series GSE154485. Drosophila melanogaster. 9 samples. Type: Expression profiling by high throughput sequencing.
An ethanol extract of Coptidis rhizoma induces apoptotic cell death in induced pluripotent stem cells and suppress teratoma formation
GEO Series GSE225709. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.
Pancreatic adenocarcinoma cell lines were treated with Agaricus blazei Murrill hot water extract (AbE).
GEO Series GSE89396. Homo sapiens. 17 samples. Type: Expression profiling by array.
Digestion treatment of uscfDNA extracted by QiaM Method
GEO Series GSE202431. Homo sapiens. 10 samples. Type: Other.
Total RNA-seq of HeLa cells upon conventional or improved RNA extraction
GEO Series GSE80589. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome Analysis of Porcine Immune Cells Stimulated by Porcine Reproductive and Respiratory Syndrome Virus (PRRSV) and Caesalpinia sappan Extract
GEO Series GSE277761. Sus scrofa. 6 samples. Type: Expression profiling by high throughput sequencing.
Cytotoxic and Molecular Effects of Soil Extracts from the Agbogbloshie Electronic-Waste Site on Fish and Human Cell Lines.
GEO Series GSE279464. Oncorhynchus mykiss; Homo sapiens. 552 samples. Type: Expression profiling by high throughput sequencing.
Immune regulation mechanism of polysacchride extracted from Acanthopanax senticosus on RAW 264.7 cells through activating the TLR/MAPK/NF-κB signaling pathway
GEO Series GSE287586. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
A comparison of RNA extraction and sequencing protocols for detection of small RNAs in plasma
GEO Series GSE118125. Homo sapiens. 30 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Functional Genomics Screen with Pooled shRNA Library and Gene Expression Profiling with Extracts of Azadirachta indica Identify Potential Pathways for Therapeutic Targets in Head and Neck Squamous Cel
GEO Series GSE125021. Homo sapiens. 24 samples. Type: Expression profiling by array.
E-cigarette Vapor Extract Alters Human Eosinophil Gene Expression in an Effect Mediated by Propylene glycol, Glycerin, and Nicotine
GEO Series GSE263814. Homo sapiens. 28 samples. Type: Expression profiling by high throughput sequencing.
Archive of Census Related Products (ACRP): 1990 Standard Extract Files
The 1990 Standard Extract Files portion of the Archive of Census Related Products (ACRP) contains population and housing data derived from the U.S. Census Bureau's 1990 STF3A database. The population data includes age distribution, education levels, ethnicity, income distribution, labor force status and family structure, while the housing data embodies size and state of the housing Unit, value of the Unit, water, sewage, heating, and monthly owner costs. The data are available by county, county subdivisions, place within-county, tract, block numbering area (bna), and blockgroup. Each file contains a unique POLygon IDentification (POLID) field which matches a similar field in the corresponding TIGER-based boundary file. Tract and blockgroup files are grouped by MSA (Metropolitan Statistical Area) and CMSA (Consolidated Metropolitan Statistical Area). This portion of the ACRP is produced by the Columbia University Center for International Earth Science Information Network (CIESIN).
Microfluidic Extraction of DNA for Identification of Unknown organisms in Microgravity Project
<p>Expanding human spaceflight beyond low-Earth orbit poses significant technological challenges. One of these challenges is environmental monitoring, specifically the ability to identify and respond to microbiological threats in real-time. Because returning samples to Earth for analysis is not practical from deep-space, in-flight environmental monitoring is an essential capability for missions away from low-Earth orbit. Microbial identification by direct sequencing is readily achieved by identifying species-specific differences in Deoxyribonucleic Acid (DNA) sequences. These analyses require the extraction and separation of DNA from cells, but current methods for DNA isolation typically require technologies incompatible with spaceflight.</p><p>In-flight environmental monitoring is an important technology for missions away from low-Earth orbit. An important aspect of environmental monitoring is the ability to identify and respond to microbiological threats. Automatable in situ monitoring technologies are essential when sample return is not practical. Microbial identification is readily achieved by identifying differences in DNA sequences, such as direct sequencing or hybridization of the DNA strands. These analyses require the extraction and separation of DNA from cells. However, current methods for DNA isolation typically require technologies incompatible with spaceflight.</p><p>We seek to develop a miniaturized MEDIUM device for the extraction of DNA from operationally relevant samples (i.e., potable water sources); the extracted DNA can then be used for microbial identification using one or more DNA-dependent molecular techniques, such as sequencing. Isolation of DNA for sequencing or other analyses typically requires technologies incompatible with spaceflight. For this reason we have carefully chosen digital microfluidics-based extraction cartridges due to their likely compatibility with microgravity. Unlike other DNA extraction methods that rely on gravitational forces, the microfluidics devices use electro-wetting to move liquids. This eliminates the requirement for pumps, centrifuges and other moving parts. The quality of the DNA extracted by the microfluidics-based platform and by conventional kit-based methods will be characterized for its suitability in next-generation sequencing applications.</p>
Phytochemical variations in medicinal herbs affecting bioefficacy: Equisetum arvense extracts in the global market place as a case study
GEO Series GSE24888. Schizosaccharomyces pombe; Saccharomyces cerevisiae. 18 samples. Type: Expression profiling by array.
Pectobacterium atrosepticum host extract induced gene expression study
GEO Series GSE11548. Pectobacterium atrosepticum. 6 samples. Type: Expression profiling by array.
RNA-sequencing data of caecum tissue of mice infected with helminths and administered garlic extract
GEO Series GSE178499. Mus musculus. 19 samples. Type: Expression profiling by high throughput sequencing.
Modulation of apple leaf trancriptome by tomato cutin monomer extract
GEO Series GSE245564. Malus domestica. 6 samples. Type: Expression profiling by high throughput sequencing.
Hepatic gene expression profiles in persimmon peel extract administrated KK-Ay mice
GEO Series GSE67573. Mus musculus. 8 samples. Type: Expression profiling by array.
Grape seed extracts-mediated lipid mobility in C. elegans
GEO Series GSE81854. Caenorhabditis elegans. 2 samples. Type: Expression profiling by array.
A maple syrup extract alters lipid metabolism in obese type 2 diabetic model mice [adipose]
GEO Series GSE112687. Mus musculus. 16 samples. Type: Expression profiling by array.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.