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4,144 results for “ITS barcode”
Supplementary material 1 from: Raupach MJ, Hannig K, Morinière J, Hendrich L (2019) About Notiophilus Duméril, 1806 (Coleoptera, Carabidae): Species delineation and phylogeny using DNA barcodes. Deutsche Entomologische Zeitschrift 66(1): 63-73. https://doi.org/10.3897/dez.66.34711
: Data type: Neighbour Joining topology
Figure 5 from: Raupach MJ, Hannig K, Morinière J, Hendrich L (2019) About Notiophilus Duméril, 1806 (Coleoptera, Carabidae): Species delineation and phylogeny using DNA barcodes. Deutsche Entomologische Zeitschrift 66(1): 63-73. https://doi.org/10.3897/dez.66.34711
Figure 5 Maximum likelihood phylogeny inferred in IQ-TREE, based on the CO1 barcode fragment for the genus Notiophilus. The model of nucleotide substitution used was selected with Modelfinder as part of the IQ-TREE work package. The tree was rooted with five Nebria species as outgroup. Nodal support was calculated with SH-aLRT (above) and UFBoot (below) values. Black dots indicate very robust nodes with very high values (SH-aLRT ≥ 90%, UFBoot ≥ 95%), grey dots indicate moderately robust nodes (SH-aLRT ≥ 80%, UFBoot ≥ 80%) and white dots indicate weak nodes (SH-aLRT < 80%, UFBoot < 80%) (see Material and Methods for details). Continent silhouettes indicate the biogeographic distribution of the analysed taxa (from left to right: Africa, Europe, Asia and North America).
Figure 3 from: Raupach MJ, Hannig K, Morinière J, Hendrich L (2019) About Notiophilus Duméril, 1806 (Coleoptera, Carabidae): Species delineation and phylogeny using DNA barcodes. Deutsche Entomologische Zeitschrift 66(1): 63-73. https://doi.org/10.3897/dez.66.34711
Figure 3 Maximum statistical parsimony network of Notiophilusbiguttatus (Fabricius, 1779) and Notiophilusquadripunctatus Dejean, 1828. Parameters used included default settings for connection steps, gaps being treated as fifth state. Each line represents a single mutational change, whereas small black dots indicate missing haplotypes. The numbers of analysed specimens (n) are listed and the diameter of the circles is proportional to the number of specimens for each haplotypes (see given open half circles with numbers). Scale bars = 1 mm. Source of photos: http://www.eurocarabidae.de/ (access date: 2019–01–15).
Figure 1 from: Raupach MJ, Hannig K, Morinière J, Hendrich L (2019) About Notiophilus Duméril, 1806 (Coleoptera, Carabidae): Species delineation and phylogeny using DNA barcodes. Deutsche Entomologische Zeitschrift 66(1): 63-73. https://doi.org/10.3897/dez.66.34711
Figure 1 Two representative species of the genus Notiophilus amongst those analysed in this study: A: Notiophilusgerminyi Fauvel in Grenier, 1863 and B: Notiophilusrufipes Curtis, 1829. Note the characteristic different size of the second elytral intervals ("Spiegelfeld") for both beetle species. Scale bars = 1 mm. Source of photos: http://www.eurocarabidae.de/ (access date: 2019–01–15).
Figure 2 from: Raupach MJ, Hannig K, Morinière J, Hendrich L (2019) About Notiophilus Duméril, 1806 (Coleoptera, Carabidae): Species delineation and phylogeny using DNA barcodes. Deutsche Entomologische Zeitschrift 66(1): 63-73. https://doi.org/10.3897/dez.66.34711
Figure 2 Neighbour joining (NJ) topology of the analysed ground beetle species of Notiophilus, based on Kimura 2-parameter distances. Numbers next to nodes represent non-parametric bootstrap values > 90% (1,000 replicates). Source of photos: http://www.eurocarabidae.de/ (access date: 2019–01–15).
Figure 4 from: Raupach MJ, Hannig K, Morinière J, Hendrich L (2019) About Notiophilus Duméril, 1806 (Coleoptera, Carabidae): Species delineation and phylogeny using DNA barcodes. Deutsche Entomologische Zeitschrift 66(1): 63-73. https://doi.org/10.3897/dez.66.34711
Figure 4 Subtree of the neighbour joining topology, based on Kimura 2-parameter distances of all analysed specimens of Notiophilusrufipes Curtis, 1829. Branches with specimen ID-number from BOLD, species names and sample localities. Numbers next to internal nodes are non-parametric bootstrap values (in %). Source of photo: http://www.eurocarabidae.de/ (access date: 2019–01–15).
Figure 3 in Bringing the lab to the field: a new lowland Microparmarion semi-slug (Gastropoda: Ariophantidae) described and DNA-barcoded in the forest
Figure 3. Genital system of Microparmarion exquadratus n. sp. (syntype SP13560).
Figure 1 in Bringing the lab to the field: a new lowland Microparmarion semi-slug (Gastropoda: Ariophantidae) described and DNA-barcoded in the forest
Figure 1. Map of Borneo, showing Malaysian state of Sabah and Tawau Hills Park.
Supplementary material 2 from: Junnilainen J, Buchner P, Kaitila J-P, Mutanen M (2019) Incurvaria pirinella sp. nov., a new species of the vetulella species-group (Lepidoptera, Incurvariidae) from Bulgaria, with release of DNA barcodes for European species of Incurvaria. Nota Lepidopterologica 42(1): 81-100. https://doi.org/10.3897/nl.42.13026
: Data type: species data
Supplementary material 1 from: Junnilainen J, Buchner P, Kaitila J-P, Mutanen M (2019) Incurvaria pirinella sp. nov., a new species of the vetulella species-group (Lepidoptera, Incurvariidae) from Bulgaria, with release of DNA barcodes for European species of Incurvaria. Nota Lepidopterologica 42(1): 81-100. https://doi.org/10.3897/nl.42.13026
: Data type: measurements
FIGURE 3 in New records and their associated DNA barcodes of the butterfly family Hesperiidae in Tibet, China
FIGURE 3. Valva of the three Halpe skippers. A, H. molta; B, H. filda; C, H. aucma. Scale bar=1 mm.
FIGURE 3 in New records and their associated DNA barcodes of the butterfly family Hesperiidae in Tibet, China
FIGURE 3. Valva of the three Halpe skippers. A, H. molta; B, H. filda; C, H. aucma. Scale bar=1 mm.
Supplementary material 2 from: Efetov KA, Kirsanova AV, Lazareva ZS, Parshkova EV, Tarmann GM, Rougerie R, Hebert PDN (2019) DNA barcoding of Zygaenidae (Lepidoptera): results and perspectives. Nota Lepidopterologica 42(2): 137-150. https://doi.org/10.3897/nl.42.33190
: Data type: species data
Supplementary material 1 from: Efetov KA, Kirsanova AV, Lazareva ZS, Parshkova EV, Tarmann GM, Rougerie R, Hebert PDN (2019) DNA barcoding of Zygaenidae (Lepidoptera): results and perspectives. Nota Lepidopterologica 42(2): 137-150. https://doi.org/10.3897/nl.42.33190
: Data type: species data
Supplementary material 3 from: Efetov KA, Kirsanova AV, Lazareva ZS, Parshkova EV, Tarmann GM, Rougerie R, Hebert PDN (2019) DNA barcoding of Zygaenidae (Lepidoptera): results and perspectives. Nota Lepidopterologica 42(2): 137-150. https://doi.org/10.3897/nl.42.33190
: Data type: species data
Figure 7 from: Motamedinia B, Skevington JH, Kelso S (2019) Revision of Claraeola (Diptera, Pipunculidae) in the Middle East based on morphology and DNA barcodes. ZooKeys 873: 85-111. https://doi.org/10.3897/zookeys.873.36645
Figure 7 Male genitalia of Claraeola parnianae Motamedinia & Kehlmaier A in dorsal view B in ventral view C ejaculatory apodeme D, E in lateral view.
Figure 5 from: Motamedinia B, Skevington JH, Kelso S (2019) Revision of Claraeola (Diptera, Pipunculidae) in the Middle East based on morphology and DNA barcodes. ZooKeys 873: 85-111. https://doi.org/10.3897/zookeys.873.36645
Figure 5 Male genitalia of holotype Claraeola khuzestanensis Motamedinia & Skevington, sp. nov. A in dorsal view B in ventral view C ejaculatory apodeme D, E in lateral view.
Figure 4 from: Motamedinia B, Skevington JH, Kelso S (2019) Revision of Claraeola (Diptera, Pipunculidae) in the Middle East based on morphology and DNA barcodes. ZooKeys 873: 85-111. https://doi.org/10.3897/zookeys.873.36645
Figure 4 Male genitalia of paratype Claraeola heidiae Motamedinia & Skevington, sp. nov. A in dorsal view B in ventral view C ejaculatory apodeme D, E in lateral view.
Figure 3 from: Motamedinia B, Skevington JH, Kelso S (2019) Revision of Claraeola (Diptera, Pipunculidae) in the Middle East based on morphology and DNA barcodes. ZooKeys 873: 85-111. https://doi.org/10.3897/zookeys.873.36645
Figure 3 Male genitalia of Claraeola halterata (Meigen) A in dorsal view B in ventral view C ejaculatory apodeme D, E in lateral view.
Figure 2 from: Motamedinia B, Skevington JH, Kelso S (2019) Revision of Claraeola (Diptera, Pipunculidae) in the Middle East based on morphology and DNA barcodes. ZooKeys 873: 85-111. https://doi.org/10.3897/zookeys.873.36645
Figure 2 Male genitalia of Claraeola conjuncta (Collin) A in dorsal view B in ventral view C ejaculatory apodeme D, E in lateral view.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
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DANDI Archive for NWB datasets
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International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.