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4,144 results for “ITS barcode”
Figure 3 from: Özcan T (2019) Defining phylogenetic relationship of Nepeta x tmolea and its parents via DNA barcoding. PhytoKeys 134: 83-96. https://doi.org/10.3897/phytokeys.134.38238
Figure 3 Phylogenetic relationship of N. viscida, N. nuda subsp. nuda and N. × tmolea with some Nepeta members and outgroups (based on nrITS sequences and Neighbour Joining phylogram (A) and Dendroscope diagram (B).(* examined taxa in this study).
Figure 2 from: Özcan T (2019) Defining phylogenetic relationship of Nepeta x tmolea and its parents via DNA barcoding. PhytoKeys 134: 83-96. https://doi.org/10.3897/phytokeys.134.38238
Figure 2 Phylogenetic position of N. viscida and N. nuda subsp. nuda amongst different Nepeta species and outgroups (based on nrITS sequences and Maximum Likelihood phylogram (A) and Neighbour-Net Diagram (B) without hybrids.(* examined taxa in this study).
Figure 1 from: Özcan T (2019) Defining phylogenetic relationship of Nepeta x tmolea and its parents via DNA barcoding. PhytoKeys 134: 83-96. https://doi.org/10.3897/phytokeys.134.38238
Figure 1 General habit, inflorescence and lower parts of N. nuda subsp. nuda (A, D, G); N. × tmolea (B, E, H) and N. viscida (C, F, I).
Figure 1 in Larva, pupa and DNA barcodes of the Neotropical geometrid moth Glena mielkei (Lepidoptera: Geometridae: Ennominae: Boarmiini)
Figure 1. Details of the natural history of G. mielkei in the Atacama Desert of northern Chile. (A) Type locality in the Azapa Valley, Arica Province, northern Chile. (B) Host plant T. cacalioides (Asteraceae) at the type locality. (C) Last instar larva of G. mielkei feeding of T. cacalioides at the type locality.
Figure 4 in Larva, pupa and DNA barcodes of the Neotropical geometrid moth Glena mielkei (Lepidoptera: Geometridae: Ennominae: Boarmiini)
Figure 4. Pupa of G. mielkei. (A) Ventral view. (B) Lateral view. (C) Dorsal view. (E) Male terminalia—ventral view. (F) Female terminalia—ventral view. Scale bar = 0.5 cm.
Fig. 3 in DNA barcode reveals high cryptic diversity in the commercially important Penaeini shrimps (Decapoda, Penaeidae)
Fig. 3 Potential threshold limit of 1.8% inferred for representatives of the Penaeini tribe
Figure 2. A neighbour-joining tree using 604 cytochrome c oxidase subunit I in Phylogenetic relationship among slender loris species (Primates, Lorisidae: Loris) in Sri Lanka based on mtDNA CO1 barcoding
Figure 2. A neighbour-joining tree using 604 cytochrome c oxidase subunit I (CO1) sequences from 7 different slender loris (Loris) taxas found in Sri Lanka with their external appearance.
Figure 3. A neighbor joining tree using cytochrome c oxidase subunit 1 in DNA barcoding of black cherry aphid Myzus cerasi (Fabricus, 1775) (Hemiptera: Aphididae) populations collected from Prunus avium and Prunus cerasus
Figure 3. A neighbor joining tree using cytochrome c oxidase subunit 1 sequences from Myzus cerasi populations.
Figure 4 in Biodiversity, DNA barcoding data and ecological traits of caddisflies (Insecta, Trichoptera) in the catchment area of the Mediterranean karst River Cetina (Croatia)
Figure 4. Distribution of species Hydroptila vichtaspa according to Fauna Europaea (accessed on 12th May 2021) with location of the first finding in Croatia.
Figure 2 in First DNA barcoding of a new alien species Glycaspis brimblecombei Moore, 1964 (Hemiptera: Aphalaridae) in Croatia with a distribution note
Figure 2. Symptomatic Eucalyptus spp. at sampling location: A. visible defoliation of top branches B. and C. leaves covered with lerps.
Figure 5. A in New records of water mites (Acari, Hydrachnidia) from Iran and Türkiye based on morphology and DNA barcodes with description of one new species
Figure 5. A Maximum Likelihood tree (GTR+G+I model) of the genus Torrenticola obtained from 33 nucleotide COI sequences. The results of species delimitation by ASAP procedure are indicated by vertical bars. B-C Results of ASAP analysis for COI sequences of the selected species of the genus Torrenticola. B – Distribution of pairwise differences; C – Ranked pairwise differences.
Figure 4 in Sperchon milisai nov. sp., an overlooked new species of water mites (Acari, Hydrachnidia, Sperchontidae) from Montenegro and Croatia, based on morphological and DNA barcode evidence
Figure 4. Sperchon milisai sp. nov. (A, C-D, holotype ♂; B, E-F, paratype ♀), Rikavac, Montenegro: A – idiosoma, dorsal view; B – idiosoma, dorsal view, partially; C – chelicera; D – gnathosoma in dorsal view; D – genital field and left coxae; F – excretory pore area. Scale bars = 100 µm.
Fig. 2 in Drapetis bruscellensis (Diptera: Hybotidae) a new species for science from the outskirts of Brussels, a not so cryptic species supported by COI barcoding
Fig. 2. Drapetis bruscellensis sp. nov. male habitus (photo Camille Locatelli).
Fig. 1 in Drapetis bruscellensis (Diptera: Hybotidae) a new species for science from the outskirts of Brussels, a not so cryptic species supported by COI barcoding
Fig. 1. Location of the Jardin botanique Jean Massart at the outskirts of Brussels (Google Earth).
FIGURE 14 in DNA barcodes and morphological evidence reveal a new genus of Nygmiini (Lepidoptera: Erebidae: Lymantriinae) from China
FIGURE 14. Venation of Aurivalva yunnanpina comb. nov., male.
FIGURE 2 in Taxonomy and DNA barcoding of the dark-winged fungus gnat genus Zygoneura Meigen (Diptera: Sciaridae) from China, with revision of the type materials
FIGURE 2. Neighbor-joining (NJ) tree of Zygoneura Meigen based on COI gene fragment.
Fig. 1 in DNA barcoding and genetic variability of earthworms (Clitellata: Oligochaeta) with new records from Mizoram, India
Fig. 1 Location of sampling sites of earthworms from Mizoram, NER
Fig. 2 in DNA barcoding and genetic variability of earthworms (Clitellata: Oligochaeta) with new records from Mizoram, India
Fig. 2 Results from ABGD analysis showing stable count of 24 OTUs
FIGURE 3 in Taxonomic delimitation of endemic Ficus amplocarpa and Ficus dalhousiae Complexes (Moraceae) by DNA barcoding
FIGURE 3. Ficus samples collection sites in Southern India.
Table 1 in DNA barcoding and morphology reveal exceptional species diversity of Scoparia (Lepidoptera: Crambidae) from the Hailuogou Glacier area, China
<p><b>Table 1.</b> Percentage of divergence in the cytochrome <i>c</i> oxidase subunit I (<i>COI</i>) gene sequences of the Scoparia species with out-groups</p><table><tbody><tr><th></th><th></th><th>1</th><th>2</th><th>3</th><th>4</th><th>5</th><th>6</th><th>7</th><th>8</th><th>9</th><th>10</th><th>11</th></tr></tbody><tbody><tr><th>1</th><td><i>Eudonia hexamera</i></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><th>2</th><td><i>Eudonia puellaris</i></td><td>6.7</td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><th>3</th><td><b><i>Scoparia simplicissima</i> sp. nov.</b></td><td>7.9–8.2</td><td>7.9–8.1</td><td><b>0–0.3</b></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><th>4</th><td><b><i>Scoparia tribulosa</i> sp. nov.</b></td><td>8.7–9.3</td><td>10.5–11.0</td><td>6.2–6.9</td><td><b>0–0.5</b></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><th>5</th><td><b><i>Scoparia longispina</i> sp. nov.</b></td><td>8.4–8.7</td><td>8.9–9.2</td><td>5.1–6.2</td><td>6.4–7.3</td><td><b>0–1.5</b></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><th>6</th><td><b><i>Scoparia gibbosa</i> sp. nov.</b></td><td>8.0–9.3</td><td>8.7–10.0</td><td>6.2–7.4</td><td>7.3–8.8</td><td>5.6–7.5</td><td><b>0–1.7</b></td><td></td><td></td><td></td><td></td><td></td></tr><tr><th>7</th><td><i>Scoparia metaleucalis</i></td><td>9.7–10.8</td><td>10.8–11.7</td><td>8.2–9.6</td><td>10.8–12.4</td><td>9.1–9.9</td><td>10.1–11.8</td><td><b>0–1.5</b></td><td></td><td></td><td></td><td></td></tr><tr><th>8</th><td><i>Scoparia jiuzhaiensis</i></td><td>9.2–9.7</td><td>9.1–9.6</td><td>8.4–8.9</td><td>9.4–10.5</td><td>10.5–10.8</td><td>9.1–10.2</td><td>13.0–14.0</td><td><b>0–0.8</b></td><td></td><td></td><td></td></tr><tr><th>9</th><td><i>Scoparia brevituba</i></td><td>9.9–10.1</td><td>9.9–10.1</td><td>9.8–10.0</td><td>10.3–11.0</td><td>11.0–11.9</td><td>9.8–11.2</td><td>12.1–13.3</td><td>7.2–7.9</td><td><b>0–0.2</b></td><td></td><td></td></tr><tr><th>10</th><td><b><i>Scoparia globosa</i> sp. nov.</b></td><td>7.9–8.5</td><td>7.7–8.2</td><td>7.7–8.7</td><td>9.9–11.2</td><td>9.3–9.9</td><td>7.4–8.6</td><td>10.5–11.5</td><td>7.5–8.2</td><td>9.6–10.3</td><td><b>0–0.6</b></td><td></td></tr><tr><th>11</th><td><b><i>Scoparia annulata</i> sp. nov.</b></td><td>8.0–9.2</td><td>8.7–9.8</td><td>7.5–8.9</td><td>9.6–11.2</td><td>8.7–10.1</td><td>7.5–10.1</td><td>11.0–12.4</td><td>6.9–8.2</td><td>8.4–9.8</td><td>6.4–7.9</td><td>0–1.7</td></tr></tbody></table><p>All genetic distances (%) were corrected with the Kimura two-parameter (K2P) substitution model using MEGA 5; extreme values of intraspecific and interspecific distances are given (the numbers in bold are the intraspecific distances).</p>
ScienceDex guides
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.