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Fig. 9 in Diagnostic Criteria For Identification Of Microtus S. L. Species (Rodentia, Arvicolidae) Of The Ukrainian Carpathians
Fig. 9. Algorithm of diagnostics of Microtus s. l. voles according to dental characters.
Fig. 2 in Diagnostic Criteria For Identification Of Microtus S. L. Species (Rodentia, Arvicolidae) Of The Ukrainian Carpathians
Fig. 2. General view of the skull of Terricola spp. (a–b) and Microtus spp. (c–d).
Fig. 1 in Diagnostic Criteria For Identification Of Microtus S. L. Species (Rodentia, Arvicolidae) Of The Ukrainian Carpathians
Fig. 1. The relation between body length and hindfoot length in M. arvalis and M. agrestis.
1/8˚ resolution MOM6-COBALT daily physical and biogeochemical diagnostics for 2008
<p>The files in this dataset contain daily mean chlorophyll (µg/kg), pH, nitrate (mol/kg), dissolved oxygen (mol/kg), potential temperature (˚C) and salinity model outputs for 2008 for the region between 20-55˚N, 135-111˚W. Data was extracted from a global grid run with coupled ocean-ice model configured using the Modular Ocean Model 6 (MOM6, <a href="https://github.com/NOAA-GFDL/MOM6">https://github.com/NOAA-GFDL/MOM6</a> ) and Sea Ice Simulator (SIS2) developed at the NOAA Geophysical Fluid Dynamics Laboratory (Adcroft et al., 2019). The horizontal resolution of the grid is 1/8˚, which is considered eddying and no eddy parameterization was included. Vertically, the model uses 75 hybrid vertical-sigma2 layer coordinates that is remapped onto 35 World Ocean Atlas/Coupled Model Intercomparison Project standard depth levels. The atmospheric forcing was derived from the Japanese 55-year Reanalysis version 1.5 (JRA55 1.5, <a href="https://jra.kishou.go.jp/JRA-55/index_en.html#jra-55">https://jra.kishou.go.jp/JRA-55/index_en.html#jra-55</a>). The model is driven by river freshwater runoff from a monthly climatology derived from Dai and Trenberth (2002) and Dai et al. (2009), which can be assessed at <a href="https://rda.ucar.edu/datasets/ds551.0/">https://rda.ucar.edu/datasets/ds551.0/</a>. A remapping scheme was used to add freshwater into the appropriate coastal grid cells near the river mouths. The biogeochemical model used was the Carbon, Ocean Biogeochemistry and Lower Trophics (COBALTv2, Stock et al., 2020), which uses 33 tracers for representation of coupled elemental cycles of carbon, nitrogen, phosphorus, iron, silicon, alkalinity, oxygen and lithogenic matter and associated plankton food web dynamics. More details about the model setup are described in Liu et al. (2019) and Liu et al. (2021). This work was part of a PMEL-led project "A Pilot BGC Argo Float Array in the California Current Large Marine Ecosystem" funded by NOAA Research.</p> <p> </p> <p>References:</p> <p> </p> <p>Adcroft, A., Anderson, W., Blanton, C., Bushuk, M., Dufour, C.O., Dunne, J.P., Griffies, S.M. et al. (2019). The GFDL Global Ocean and Sea Ice Model OM4.0: Model description and simulation features. Journal of Advances in Modeling Earth System, doi: 10.1029/2019MS001726</p> <p> </p> <p>Dai, A., T. Qian, K. E. Trenberth, and J. D Milliman, 2009: Changes in continental freshwater discharge from 1948-2004. J. Climate, 22, 2773-2791</p> <p> </p> <p>Dai, A., and K. E. Trenberth, 2002: Estimates of freshwater discharge from continents: Latitudinal and seasonal variations. J. Hydrometeorol., 3, 660-687</p> <p> </p> <p>Liu, X., Dunne, J.P., Stock, C. A., Harrison, M.J., Adcroft, A., Resplandy, L. (2019). Simulating Water Residence Time in the Coastal Ocean: A Global Perspective. Geophysical Research Letters, 46, 22, 13910-13919. Doi:10.1029/2019GL085097</p> <p> </p> <p>Liu, X., Stock, C.A., Dunne, J.P., Lee, M., Shevliakova, E., Malyshev, S., Milly, P.C.D (2021). Simulated Global Coastal Ecosystem Responses to a Half-Century Increase in River Nitrogen Loads.</p> <p> </p> <p>Stock, C. A., Dunne, J. P., Fan, S., Ginoux, P., John, J., Krasting, J. P., et al. (2020). Ocean biogeochemistry in GFDL's Earth System Model 4.1 and its response to increasing atmospheric CO<sub>2</sub>. <em>Journal of Advances in Modeling Earth Systems</em>, <em>12</em>, e2019MS002043. https://doi.org/10.1029/2019MS002043</p>
1/8˚ resolution MOM6-COBALT daily physical and biogeochemical diagnostics for 2010
<p>The files in this dataset contain daily mean chlorophyll (µg/kg), pH, nitrate (mol/kg), dissolved oxygen (mol/kg), potential temperature (˚C) and salinity model outputs for 2010 for the region between 20-55˚N, 135-111˚W. Data was extracted from a global grid run with coupled ocean-ice model configured using the Modular Ocean Model 6 (MOM6, <a href="https://github.com/NOAA-GFDL/MOM6">https://github.com/NOAA-GFDL/MOM6</a> ) and Sea Ice Simulator (SIS2) developed at the NOAA Geophysical Fluid Dynamics Laboratory (Adcroft et al., 2019). The horizontal resolution of the grid is 1/8˚, which is considered eddying and no eddy parameterization was included. Vertically, the model uses 75 hybrid vertical-sigma2 layer coordinates that is remapped onto 35 World Ocean Atlas/Coupled Model Intercomparison Project standard depth levels. The atmospheric forcing was derived from the Japanese 55-year Reanalysis version 1.5 (JRA55 1.5, <a href="https://jra.kishou.go.jp/JRA-55/index_en.html#jra-55">https://jra.kishou.go.jp/JRA-55/index_en.html#jra-55</a>). The model is driven by river freshwater runoff from a monthly climatology derived from Dai and Trenberth (2002) and Dai et al. (2009), which can be assessed at <a href="https://rda.ucar.edu/datasets/ds551.0/">https://rda.ucar.edu/datasets/ds551.0/</a>. A remapping scheme was used to add freshwater into the appropriate coastal grid cells near the river mouths. The biogeochemical model used was the Carbon, Ocean Biogeochemistry and Lower Trophics (COBALTv2, Stock et al., 2020), which uses 33 tracers for representation of coupled elemental cycles of carbon, nitrogen, phosphorus, iron, silicon, alkalinity, oxygen and lithogenic matter and associated plankton food web dynamics. More details about the model setup are described in Liu et al. (2019) and Liu et al. (2021). This work was part of a PMEL-led project "A Pilot BGC Argo Float Array in the California Current Large Marine Ecosystem" funded by NOAA Research.</p> <p> </p> <p>References:</p> <p> </p> <p>Adcroft, A., Anderson, W., Blanton, C., Bushuk, M., Dufour, C.O., Dunne, J.P., Griffies, S.M. et al. (2019). The GFDL Global Ocean and Sea Ice Model OM4.0: Model description and simulation features. Journal of Advances in Modeling Earth System, doi: 10.1029/2019MS001726</p> <p> </p> <p>Dai, A., T. Qian, K. E. Trenberth, and J. D Milliman, 2009: Changes in continental freshwater discharge from 1948-2004. J. Climate, 22, 2773-2791</p> <p> </p> <p>Dai, A., and K. E. Trenberth, 2002: Estimates of freshwater discharge from continents: Latitudinal and seasonal variations. J. Hydrometeorol., 3, 660-687</p> <p> </p> <p>Liu, X., Dunne, J.P., Stock, C. A., Harrison, M.J., Adcroft, A., Resplandy, L. (2019). Simulating Water Residence Time in the Coastal Ocean: A Global Perspective. Geophysical Research Letters, 46, 22, 13910-13919. Doi:10.1029/2019GL085097</p> <p> </p> <p>Liu, X., Stock, C.A., Dunne, J.P., Lee, M., Shevliakova, E., Malyshev, S., Milly, P.C.D (2021). Simulated Global Coastal Ecosystem Responses to a Half-Century Increase in River Nitrogen Loads.</p> <p> </p> <p>Stock, C. A., Dunne, J. P., Fan, S., Ginoux, P., John, J., Krasting, J. P., et al. (2020). Ocean biogeochemistry in GFDL's Earth System Model 4.1 and its response to increasing atmospheric CO<sub>2</sub>. <em>Journal of Advances in Modeling Earth Systems</em>, <em>12</em>, e2019MS002043. https://doi.org/10.1029/2019MS002043</p>
1/8˚ resolution MOM6-COBALT daily physical and biogeochemical diagnostics for 2009
<p>The files in this dataset contain daily mean chlorophyll (µg/kg), pH, nitrate (mol/kg), dissolved oxygen (mol/kg), potential temperature (˚C) and salinity model outputs for 2009 for the region between 20-55˚N, 135-111˚W. Data was extracted from a global grid run with coupled ocean-ice model configured using the Modular Ocean Model 6 (MOM6, <a href="https://github.com/NOAA-GFDL/MOM6">https://github.com/NOAA-GFDL/MOM6</a> ) and Sea Ice Simulator (SIS2) developed at the NOAA Geophysical Fluid Dynamics Laboratory (Adcroft et al., 2019). The horizontal resolution of the grid is 1/8˚, which is considered eddying and no eddy parameterization was included. Vertically, the model uses 75 hybrid vertical-sigma2 layer coordinates that is remapped onto 35 World Ocean Atlas/Coupled Model Intercomparison Project standard depth levels. The atmospheric forcing was derived from the Japanese 55-year Reanalysis version 1.5 (JRA55 1.5, <a href="https://jra.kishou.go.jp/JRA-55/index_en.html#jra-55">https://jra.kishou.go.jp/JRA-55/index_en.html#jra-55</a>). The model is driven by river freshwater runoff from a monthly climatology derived from Dai and Trenberth (2002) and Dai et al. (2009), which can be assessed at <a href="https://rda.ucar.edu/datasets/ds551.0/">https://rda.ucar.edu/datasets/ds551.0/</a>. A remapping scheme was used to add freshwater into the appropriate coastal grid cells near the river mouths. The biogeochemical model used was the Carbon, Ocean Biogeochemistry and Lower Trophics (COBALTv2, Stock et al., 2020), which uses 33 tracers for representation of coupled elemental cycles of carbon, nitrogen, phosphorus, iron, silicon, alkalinity, oxygen and lithogenic matter and associated plankton food web dynamics. More details about the model setup are described in Liu et al. (2019) and Liu et al. (2021). This work was part of a PMEL-led project "A Pilot BGC Argo Float Array in the California Current Large Marine Ecosystem" funded by NOAA Research.</p> <p> </p> <p>References:</p> <p> </p> <p>Adcroft, A., Anderson, W., Blanton, C., Bushuk, M., Dufour, C.O., Dunne, J.P., Griffies, S.M. et al. (2019). The GFDL Global Ocean and Sea Ice Model OM4.0: Model description and simulation features. Journal of Advances in Modeling Earth System, doi: 10.1029/2019MS001726</p> <p> </p> <p>Dai, A., T. Qian, K. E. Trenberth, and J. D Milliman, 2009: Changes in continental freshwater discharge from 1948-2004. J. Climate, 22, 2773-2791</p> <p> </p> <p>Dai, A., and K. E. Trenberth, 2002: Estimates of freshwater discharge from continents: Latitudinal and seasonal variations. J. Hydrometeorol., 3, 660-687</p> <p> </p> <p>Liu, X., Dunne, J.P., Stock, C. A., Harrison, M.J., Adcroft, A., Resplandy, L. (2019). Simulating Water Residence Time in the Coastal Ocean: A Global Perspective. Geophysical Research Letters, 46, 22, 13910-13919. Doi:10.1029/2019GL085097</p> <p> </p> <p>Liu, X., Stock, C.A., Dunne, J.P., Lee, M., Shevliakova, E., Malyshev, S., Milly, P.C.D (2021). Simulated Global Coastal Ecosystem Responses to a Half-Century Increase in River Nitrogen Loads.</p> <p> </p> <p>Stock, C. A., Dunne, J. P., Fan, S., Ginoux, P., John, J., Krasting, J. P., et al. (2020). Ocean biogeochemistry in GFDL's Earth System Model 4.1 and its response to increasing atmospheric CO<sub>2</sub>. <em>Journal of Advances in Modeling Earth Systems</em>, <em>12</em>, e2019MS002043. https://doi.org/10.1029/2019MS002043</p>
1/8˚ resolution MOM6-COBALT daily physical and biogeochemical diagnostics for 2011
<p>The files in this dataset contain daily mean chlorophyll (µg/kg), pH, nitrate (mol/kg), dissolved oxygen (mol/kg), potential temperature (˚C) and salinity model outputs for 2011 for the region between 20-55˚N, 135-111˚W. Data was extracted from a global grid run with coupled ocean-ice model configured using the Modular Ocean Model 6 (MOM6, <a href="https://github.com/NOAA-GFDL/MOM6">https://github.com/NOAA-GFDL/MOM6</a> ) and Sea Ice Simulator (SIS2) developed at the NOAA Geophysical Fluid Dynamics Laboratory (Adcroft et al., 2019). The horizontal resolution of the grid is 1/8˚, which is considered eddying and no eddy parameterization was included. Vertically, the model uses 75 hybrid vertical-sigma2 layer coordinates that is remapped onto 35 World Ocean Atlas/Coupled Model Intercomparison Project standard depth levels. The atmospheric forcing was derived from the Japanese 55-year Reanalysis version 1.5 (JRA55 1.5, <a href="https://jra.kishou.go.jp/JRA-55/index_en.html#jra-55">https://jra.kishou.go.jp/JRA-55/index_en.html#jra-55</a>). The model is driven by river freshwater runoff from a monthly climatology derived from Dai and Trenberth (2002) and Dai et al. (2009), which can be assessed at <a href="https://rda.ucar.edu/datasets/ds551.0/">https://rda.ucar.edu/datasets/ds551.0/</a>. A remapping scheme was used to add freshwater into the appropriate coastal grid cells near the river mouths. The biogeochemical model used was the Carbon, Ocean Biogeochemistry and Lower Trophics (COBALTv2, Stock et al., 2020), which uses 33 tracers for representation of coupled elemental cycles of carbon, nitrogen, phosphorus, iron, silicon, alkalinity, oxygen and lithogenic matter and associated plankton food web dynamics. More details about the model setup are described in Liu et al. (2019) and Liu et al. (2021). This work was part of a PMEL-led project "A Pilot BGC Argo Float Array in the California Current Large Marine Ecosystem" funded by NOAA Research.</p> <p> </p> <p>References:</p> <p> </p> <p>Adcroft, A., Anderson, W., Blanton, C., Bushuk, M., Dufour, C.O., Dunne, J.P., Griffies, S.M. et al. (2019). The GFDL Global Ocean and Sea Ice Model OM4.0: Model description and simulation features. Journal of Advances in Modeling Earth System, doi: 10.1029/2019MS001726</p> <p> </p> <p>Dai, A., T. Qian, K. E. Trenberth, and J. D Milliman, 2009: Changes in continental freshwater discharge from 1948-2004. J. Climate, 22, 2773-2791</p> <p> </p> <p>Dai, A., and K. E. Trenberth, 2002: Estimates of freshwater discharge from continents: Latitudinal and seasonal variations. J. Hydrometeorol., 3, 660-687</p> <p> </p> <p>Liu, X., Dunne, J.P., Stock, C. A., Harrison, M.J., Adcroft, A., Resplandy, L. (2019). Simulating Water Residence Time in the Coastal Ocean: A Global Perspective. Geophysical Research Letters, 46, 22, 13910-13919. Doi:10.1029/2019GL085097</p> <p> </p> <p>Liu, X., Stock, C.A., Dunne, J.P., Lee, M., Shevliakova, E., Malyshev, S., Milly, P.C.D (2021). Simulated Global Coastal Ecosystem Responses to a Half-Century Increase in River Nitrogen Loads.</p> <p> </p> <p>Stock, C. A., Dunne, J. P., Fan, S., Ginoux, P., John, J., Krasting, J. P., et al. (2020). Ocean biogeochemistry in GFDL's Earth System Model 4.1 and its response to increasing atmospheric CO<sub>2</sub>. <em>Journal of Advances in Modeling Earth Systems</em>, <em>12</em>, e2019MS002043. https://doi.org/10.1029/2019MS002043</p>
1/8˚ resolution MOM6-COBALT daily physical and biogeochemical diagnostics for 2012
<p>The files in this dataset contain daily mean chlorophyll (µg/kg), pH, nitrate (mol/kg), dissolved oxygen (mol/kg), potential temperature (˚C) and salinity model outputs for 2012 for the region between 20-55˚N, 135-111˚W. Data was extracted from a global grid run with coupled ocean-ice model configured using the Modular Ocean Model 6 (MOM6, <a href="https://github.com/NOAA-GFDL/MOM6">https://github.com/NOAA-GFDL/MOM6</a> ) and Sea Ice Simulator (SIS2) developed at the NOAA Geophysical Fluid Dynamics Laboratory (Adcroft et al., 2019). The horizontal resolution of the grid is 1/8˚, which is considered eddying and no eddy parameterization was included. Vertically, the model uses 75 hybrid vertical-sigma2 layer coordinates that is remapped onto 35 World Ocean Atlas/Coupled Model Intercomparison Project standard depth levels. The atmospheric forcing was derived from the Japanese 55-year Reanalysis version 1.5 (JRA55 1.5, <a href="https://jra.kishou.go.jp/JRA-55/index_en.html#jra-55">https://jra.kishou.go.jp/JRA-55/index_en.html#jra-55</a>). The model is driven by river freshwater runoff from a monthly climatology derived from Dai and Trenberth (2002) and Dai et al. (2009), which can be assessed at <a href="https://rda.ucar.edu/datasets/ds551.0/">https://rda.ucar.edu/datasets/ds551.0/</a>. A remapping scheme was used to add freshwater into the appropriate coastal grid cells near the river mouths. The biogeochemical model used was the Carbon, Ocean Biogeochemistry and Lower Trophics (COBALTv2, Stock et al., 2020), which uses 33 tracers for representation of coupled elemental cycles of carbon, nitrogen, phosphorus, iron, silicon, alkalinity, oxygen and lithogenic matter and associated plankton food web dynamics. More details about the model setup are described in Liu et al. (2019) and Liu et al. (2021). This work was part of a PMEL-led project "A Pilot BGC Argo Float Array in the California Current Large Marine Ecosystem" funded by NOAA Research.</p> <p> </p> <p>References:</p> <p> </p> <p>Adcroft, A., Anderson, W., Blanton, C., Bushuk, M., Dufour, C.O., Dunne, J.P., Griffies, S.M. et al. (2019). The GFDL Global Ocean and Sea Ice Model OM4.0: Model description and simulation features. Journal of Advances in Modeling Earth System, doi: 10.1029/2019MS001726</p> <p> </p> <p>Dai, A., T. Qian, K. E. Trenberth, and J. D Milliman, 2009: Changes in continental freshwater discharge from 1948-2004. J. Climate, 22, 2773-2791</p> <p> </p> <p>Dai, A., and K. E. Trenberth, 2002: Estimates of freshwater discharge from continents: Latitudinal and seasonal variations. J. Hydrometeorol., 3, 660-687</p> <p> </p> <p>Liu, X., Dunne, J.P., Stock, C. A., Harrison, M.J., Adcroft, A., Resplandy, L. (2019). Simulating Water Residence Time in the Coastal Ocean: A Global Perspective. Geophysical Research Letters, 46, 22, 13910-13919. Doi:10.1029/2019GL085097</p> <p> </p> <p>Liu, X., Stock, C.A., Dunne, J.P., Lee, M., Shevliakova, E., Malyshev, S., Milly, P.C.D (2021). Simulated Global Coastal Ecosystem Responses to a Half-Century Increase in River Nitrogen Loads.</p> <p> </p> <p>Stock, C. A., Dunne, J. P., Fan, S., Ginoux, P., John, J., Krasting, J. P., et al. (2020). Ocean biogeochemistry in GFDL's Earth System Model 4.1 and its response to increasing atmospheric CO<sub>2</sub>. <em>Journal of Advances in Modeling Earth Systems</em>, <em>12</em>, e2019MS002043. https://doi.org/10.1029/2019MS002043</p>
1/8˚ resolution MOM6-COBALT daily physical and biogeochemical diagnostics for 2013
<p>The files in this dataset contain daily mean chlorophyll (µg/kg), pH, nitrate (mol/kg), dissolved oxygen (mol/kg), potential temperature (˚C) and salinity model outputs for 2013 for the region between 20-55˚N, 135-111˚W. Data was extracted from a global grid run with coupled ocean-ice model configured using the Modular Ocean Model 6 (MOM6, <a href="https://github.com/NOAA-GFDL/MOM6">https://github.com/NOAA-GFDL/MOM6</a> ) and Sea Ice Simulator (SIS2) developed at the NOAA Geophysical Fluid Dynamics Laboratory (Adcroft et al., 2019). The horizontal resolution of the grid is 1/8˚, which is considered eddying and no eddy parameterization was included. Vertically, the model uses 75 hybrid vertical-sigma2 layer coordinates that is remapped onto 35 World Ocean Atlas/Coupled Model Intercomparison Project standard depth levels. The atmospheric forcing was derived from the Japanese 55-year Reanalysis version 1.5 (JRA55 1.5, <a href="https://jra.kishou.go.jp/JRA-55/index_en.html#jra-55">https://jra.kishou.go.jp/JRA-55/index_en.html#jra-55</a>). The model is driven by river freshwater runoff from a monthly climatology derived from Dai and Trenberth (2002) and Dai et al. (2009), which can be assessed at <a href="https://rda.ucar.edu/datasets/ds551.0/">https://rda.ucar.edu/datasets/ds551.0/</a>. A remapping scheme was used to add freshwater into the appropriate coastal grid cells near the river mouths. The biogeochemical model used was the Carbon, Ocean Biogeochemistry and Lower Trophics (COBALTv2, Stock et al., 2020), which uses 33 tracers for representation of coupled elemental cycles of carbon, nitrogen, phosphorus, iron, silicon, alkalinity, oxygen and lithogenic matter and associated plankton food web dynamics. More details about the model setup are described in Liu et al. (2019) and Liu et al. (2021). This work was part of a PMEL-led project "A Pilot BGC Argo Float Array in the California Current Large Marine Ecosystem" funded by NOAA Research.</p> <p> </p> <p>References:</p> <p> </p> <p>Adcroft, A., Anderson, W., Blanton, C., Bushuk, M., Dufour, C.O., Dunne, J.P., Griffies, S.M. et al. (2019). The GFDL Global Ocean and Sea Ice Model OM4.0: Model description and simulation features. Journal of Advances in Modeling Earth System, doi: 10.1029/2019MS001726</p> <p> </p> <p>Dai, A., T. Qian, K. E. Trenberth, and J. D Milliman, 2009: Changes in continental freshwater discharge from 1948-2004. J. Climate, 22, 2773-2791</p> <p> </p> <p>Dai, A., and K. E. Trenberth, 2002: Estimates of freshwater discharge from continents: Latitudinal and seasonal variations. J. Hydrometeorol., 3, 660-687</p> <p> </p> <p>Liu, X., Dunne, J.P., Stock, C. A., Harrison, M.J., Adcroft, A., Resplandy, L. (2019). Simulating Water Residence Time in the Coastal Ocean: A Global Perspective. Geophysical Research Letters, 46, 22, 13910-13919. Doi:10.1029/2019GL085097</p> <p> </p> <p>Liu, X., Stock, C.A., Dunne, J.P., Lee, M., Shevliakova, E., Malyshev, S., Milly, P.C.D (2021). Simulated Global Coastal Ecosystem Responses to a Half-Century Increase in River Nitrogen Loads.</p> <p> </p> <p>Stock, C. A., Dunne, J. P., Fan, S., Ginoux, P., John, J., Krasting, J. P., et al. (2020). Ocean biogeochemistry in GFDL's Earth System Model 4.1 and its response to increasing atmospheric CO<sub>2</sub>. <em>Journal of Advances in Modeling Earth Systems</em>, <em>12</em>, e2019MS002043. https://doi.org/10.1029/2019MS002043</p>
1/8˚ resolution MOM6-COBALT daily physical and biogeochemical diagnostics for 2016
<p>The files in this dataset contain daily mean chlorophyll (µg/kg), pH, nitrate (mol/kg), dissolved oxygen (mol/kg), potential temperature (˚C) and salinity model outputs for 2016 for the region between 20-55˚N, 135-111˚W. Data was extracted from a global grid run with coupled ocean-ice model configured using the Modular Ocean Model 6 (MOM6, <a href="https://github.com/NOAA-GFDL/MOM6">https://github.com/NOAA-GFDL/MOM6</a> ) and Sea Ice Simulator (SIS2) developed at the NOAA Geophysical Fluid Dynamics Laboratory (Adcroft et al., 2019). The horizontal resolution of the grid is 1/8˚, which is considered eddying and no eddy parameterization was included. Vertically, the model uses 75 hybrid vertical-sigma2 layer coordinates that is remapped onto 35 World Ocean Atlas/Coupled Model Intercomparison Project standard depth levels. The atmospheric forcing was derived from the Japanese 55-year Reanalysis version 1.5 (JRA55 1.5, <a href="https://jra.kishou.go.jp/JRA-55/index_en.html#jra-55">https://jra.kishou.go.jp/JRA-55/index_en.html#jra-55</a>). The model is driven by river freshwater runoff from a monthly climatology derived from Dai and Trenberth (2002) and Dai et al. (2009), which can be assessed at <a href="https://rda.ucar.edu/datasets/ds551.0/">https://rda.ucar.edu/datasets/ds551.0/</a>. A remapping scheme was used to add freshwater into the appropriate coastal grid cells near the river mouths. The biogeochemical model used was the Carbon, Ocean Biogeochemistry and Lower Trophics (COBALTv2, Stock et al., 2020), which uses 33 tracers for representation of coupled elemental cycles of carbon, nitrogen, phosphorus, iron, silicon, alkalinity, oxygen and lithogenic matter and associated plankton food web dynamics. More details about the model setup are described in Liu et al. (2019) and Liu et al. (2021). This work was part of a PMEL-led project "A Pilot BGC Argo Float Array in the California Current Large Marine Ecosystem" funded by NOAA Research.</p> <p> </p> <p>References:</p> <p> </p> <p>Adcroft, A., Anderson, W., Blanton, C., Bushuk, M., Dufour, C.O., Dunne, J.P., Griffies, S.M. et al. (2019). The GFDL Global Ocean and Sea Ice Model OM4.0: Model description and simulation features. Journal of Advances in Modeling Earth System, doi: 10.1029/2019MS001726</p> <p> </p> <p>Dai, A., T. Qian, K. E. Trenberth, and J. D Milliman, 2009: Changes in continental freshwater discharge from 1948-2004. J. Climate, 22, 2773-2791</p> <p> </p> <p>Dai, A., and K. E. Trenberth, 2002: Estimates of freshwater discharge from continents: Latitudinal and seasonal variations. J. Hydrometeorol., 3, 660-687</p> <p> </p> <p>Liu, X., Dunne, J.P., Stock, C. A., Harrison, M.J., Adcroft, A., Resplandy, L. (2019). Simulating Water Residence Time in the Coastal Ocean: A Global Perspective. Geophysical Research Letters, 46, 22, 13910-13919. Doi:10.1029/2019GL085097</p> <p> </p> <p>Liu, X., Stock, C.A., Dunne, J.P., Lee, M., Shevliakova, E., Malyshev, S., Milly, P.C.D (2021). Simulated Global Coastal Ecosystem Responses to a Half-Century Increase in River Nitrogen Loads.</p> <p> </p> <p>Stock, C. A., Dunne, J. P., Fan, S., Ginoux, P., John, J., Krasting, J. P., et al. (2020). Ocean biogeochemistry in GFDL's Earth System Model 4.1 and its response to increasing atmospheric CO<sub>2</sub>. <em>Journal of Advances in Modeling Earth Systems</em>, <em>12</em>, e2019MS002043. https://doi.org/10.1029/2019MS002043</p>
1/8˚ resolution MOM6-COBALT daily physical and biogeochemical diagnostics for 2015
<p>The files in this dataset contain daily mean chlorophyll (µg/kg), pH, nitrate (mol/kg), dissolved oxygen (mol/kg), potential temperature (˚C) and salinity model outputs for 2015 for the region between 20-55˚N, 135-111˚W. Data was extracted from a global grid run with coupled ocean-ice model configured using the Modular Ocean Model 6 (MOM6, <a href="https://github.com/NOAA-GFDL/MOM6">https://github.com/NOAA-GFDL/MOM6</a> ) and Sea Ice Simulator (SIS2) developed at the NOAA Geophysical Fluid Dynamics Laboratory (Adcroft et al., 2019). The horizontal resolution of the grid is 1/8˚, which is considered eddying and no eddy parameterization was included. Vertically, the model uses 75 hybrid vertical-sigma2 layer coordinates that is remapped onto 35 World Ocean Atlas/Coupled Model Intercomparison Project standard depth levels. The atmospheric forcing was derived from the Japanese 55-year Reanalysis version 1.5 (JRA55 1.5, <a href="https://jra.kishou.go.jp/JRA-55/index_en.html#jra-55">https://jra.kishou.go.jp/JRA-55/index_en.html#jra-55</a>). The model is driven by river freshwater runoff from a monthly climatology derived from Dai and Trenberth (2002) and Dai et al. (2009), which can be assessed at <a href="https://rda.ucar.edu/datasets/ds551.0/">https://rda.ucar.edu/datasets/ds551.0/</a>. A remapping scheme was used to add freshwater into the appropriate coastal grid cells near the river mouths. The biogeochemical model used was the Carbon, Ocean Biogeochemistry and Lower Trophics (COBALTv2, Stock et al., 2020), which uses 33 tracers for representation of coupled elemental cycles of carbon, nitrogen, phosphorus, iron, silicon, alkalinity, oxygen and lithogenic matter and associated plankton food web dynamics. More details about the model setup are described in Liu et al. (2019) and Liu et al. (2021). This work was part of a PMEL-led project "A Pilot BGC Argo Float Array in the California Current Large Marine Ecosystem" funded by NOAA Research.</p> <p> </p> <p>References:</p> <p> </p> <p>Adcroft, A., Anderson, W., Blanton, C., Bushuk, M., Dufour, C.O., Dunne, J.P., Griffies, S.M. et al. (2019). The GFDL Global Ocean and Sea Ice Model OM4.0: Model description and simulation features. Journal of Advances in Modeling Earth System, doi: 10.1029/2019MS001726</p> <p> </p> <p>Dai, A., T. Qian, K. E. Trenberth, and J. D Milliman, 2009: Changes in continental freshwater discharge from 1948-2004. J. Climate, 22, 2773-2791</p> <p> </p> <p>Dai, A., and K. E. Trenberth, 2002: Estimates of freshwater discharge from continents: Latitudinal and seasonal variations. J. Hydrometeorol., 3, 660-687</p> <p> </p> <p>Liu, X., Dunne, J.P., Stock, C. A., Harrison, M.J., Adcroft, A., Resplandy, L. (2019). Simulating Water Residence Time in the Coastal Ocean: A Global Perspective. Geophysical Research Letters, 46, 22, 13910-13919. Doi:10.1029/2019GL085097</p> <p> </p> <p>Liu, X., Stock, C.A., Dunne, J.P., Lee, M., Shevliakova, E., Malyshev, S., Milly, P.C.D (2021). Simulated Global Coastal Ecosystem Responses to a Half-Century Increase in River Nitrogen Loads.</p> <p> </p> <p>Stock, C. A., Dunne, J. P., Fan, S., Ginoux, P., John, J., Krasting, J. P., et al. (2020). Ocean biogeochemistry in GFDL's Earth System Model 4.1 and its response to increasing atmospheric CO<sub>2</sub>. <em>Journal of Advances in Modeling Earth Systems</em>, <em>12</em>, e2019MS002043. https://doi.org/10.1029/2019MS002043</p>
1/8˚ resolution MOM6-COBALT daily physical and biogeochemical diagnostics for 2018
<p>The files in this dataset contain daily mean chlorophyll (µg/kg), pH, nitrate (mol/kg), dissolved oxygen (mol/kg), potential temperature (˚C) and salinity model outputs for 2018 for the region between 20-55˚N, 135-111˚W. Data was extracted from a global grid run with coupled ocean-ice model configured using the Modular Ocean Model 6 (MOM6, <a href="https://github.com/NOAA-GFDL/MOM6">https://github.com/NOAA-GFDL/MOM6</a> ) and Sea Ice Simulator (SIS2) developed at the NOAA Geophysical Fluid Dynamics Laboratory (Adcroft et al., 2019). The horizontal resolution of the grid is 1/8˚, which is considered eddying and no eddy parameterization was included. Vertically, the model uses 75 hybrid vertical-sigma2 layer coordinates that is remapped onto 35 World Ocean Atlas/Coupled Model Intercomparison Project standard depth levels. The atmospheric forcing was derived from the Japanese 55-year Reanalysis version 1.5 (JRA55 1.5, <a href="https://jra.kishou.go.jp/JRA-55/index_en.html#jra-55">https://jra.kishou.go.jp/JRA-55/index_en.html#jra-55</a>). The model is driven by river freshwater runoff from a monthly climatology derived from Dai and Trenberth (2002) and Dai et al. (2009), which can be assessed at <a href="https://rda.ucar.edu/datasets/ds551.0/">https://rda.ucar.edu/datasets/ds551.0/</a>. A remapping scheme was used to add freshwater into the appropriate coastal grid cells near the river mouths. The biogeochemical model used was the Carbon, Ocean Biogeochemistry and Lower Trophics (COBALTv2, Stock et al., 2020), which uses 33 tracers for representation of coupled elemental cycles of carbon, nitrogen, phosphorus, iron, silicon, alkalinity, oxygen and lithogenic matter and associated plankton food web dynamics. More details about the model setup are described in Liu et al. (2019) and Liu et al. (2021). This work was part of a PMEL-led project "A Pilot BGC Argo Float Array in the California Current Large Marine Ecosystem" funded by NOAA Research.</p> <p> </p> <p>References:</p> <p> </p> <p>Adcroft, A., Anderson, W., Blanton, C., Bushuk, M., Dufour, C.O., Dunne, J.P., Griffies, S.M. et al. (2019). The GFDL Global Ocean and Sea Ice Model OM4.0: Model description and simulation features. Journal of Advances in Modeling Earth System, doi: 10.1029/2019MS001726</p> <p> </p> <p>Dai, A., T. Qian, K. E. Trenberth, and J. D Milliman, 2009: Changes in continental freshwater discharge from 1948-2004. J. Climate, 22, 2773-2791</p> <p> </p> <p>Dai, A., and K. E. Trenberth, 2002: Estimates of freshwater discharge from continents: Latitudinal and seasonal variations. J. Hydrometeorol., 3, 660-687</p> <p> </p> <p>Liu, X., Dunne, J.P., Stock, C. A., Harrison, M.J., Adcroft, A., Resplandy, L. (2019). Simulating Water Residence Time in the Coastal Ocean: A Global Perspective. Geophysical Research Letters, 46, 22, 13910-13919. Doi:10.1029/2019GL085097</p> <p> </p> <p>Liu, X., Stock, C.A., Dunne, J.P., Lee, M., Shevliakova, E., Malyshev, S., Milly, P.C.D (2021). Simulated Global Coastal Ecosystem Responses to a Half-Century Increase in River Nitrogen Loads.</p> <p> </p> <p>Stock, C. A., Dunne, J. P., Fan, S., Ginoux, P., John, J., Krasting, J. P., et al. (2020). Ocean biogeochemistry in GFDL's Earth System Model 4.1 and its response to increasing atmospheric CO<sub>2</sub>. <em>Journal of Advances in Modeling Earth Systems</em>, <em>12</em>, e2019MS002043. https://doi.org/10.1029/2019MS002043</p>
Data of publication "A simple diagnostic based on sea surface height with application to Central Pacific ENSO"
<p>Data used for the analysis presented in the publication "A simple diagnostic based on sea surface height with application to Central Pacific ENSO" by Lai et al.</p>
Code and data for "Discovery and validation of tissue-specific DNA methylation as noninvasive diagnostic markers for colorectal cancer".
<p>Code and data for "<strong>Discovery and validation of tissue-specific DNA methylation as noninvasive diagnostic markers for colorectal cancer</strong>".</p> <ul> <li> <p>The publicly available datasets supporting the conclusions of this article are available in the Gene Expression Omnibus repository (<a href="https://www.ncbi.nlm.nih.gov/geo/">https://www.ncbi.nlm.nih.gov/geo/</a>) and UCSC Xena Browser (TCGA, <a href="https://xena.ucsc.edu/">https://xena.ucsc.edu/</a>).</p> </li> </ul>
Temporal FEL Pulse Shaping and Diagnostics at SwissFEL with Tilted Electron Beams
<p>Data for all results shown in my Dissertation.<br>It is a large file archive with simulation and measurement data. Furthermore, almost all analysis scripts are included. The only analysis software missing is the photon spectrum spike analysis, which was written by Adrian Rutschmann.</p> <p>The archive also includes the tex files and a Makefile. From the information (starting from main.tex) one can find the analysis scripts that correspond to each plot.</p> <p>The data was also used for the conference contribution MOP51 to the FEL conference 2022 (fel2022.org).</p>
1/8˚ resolution MOM6-COBALT physical and biogeochemical diagnostics interpolated to 1˚, monthly means between 1965-2017
<p>Data was extracted from a global grid run with coupled ocean-ice model configured using the Modular Ocean Model 6 (MOM6, <a href="https://github.com/NOAA-GFDL/MOM6">https://github.com/NOAA-GFDL/MOM6</a> ) and Sea Ice Simulator (SIS2) developed at the NOAA Geophysical Fluid Dynamics Laboratory (Adcroft et al., 2019). The horizontal resolution of the grid is 1/8˚, which is considered eddying and no eddy parameterization was included. Vertically, the model uses 75 hybrid vertical-sigma2 layer coordinates that is remapped onto 35 World Ocean Atlas/Coupled Model Intercomparison Project standard depth levels. The atmospheric forcing was derived from the Japanese 55-year Reanalysis version 1.5 (JRA55 1.5, <a href="https://jra.kishou.go.jp/JRA-55/index_en.html#jra-55">https://jra.kishou.go.jp/JRA-55/index_en.html#jra-55</a>). The model is driven by river freshwater runoff from a monthly climatology derived from Dai and Trenberth (2002) and Dai et al. (2009), which can be assessed at <a href="https://rda.ucar.edu/datasets/ds551.0/">https://rda.ucar.edu/datasets/ds551.0/</a>. A remapping scheme was used to add freshwater into the appropriate coastal grid cells near the river mouths. The biogeochemical model used was the Carbon, Ocean Biogeochemistry and Lower Trophics (COBALTv2, Stock et al., 2020), which uses 33 tracers for representation of coupled elemental cycles of carbon, nitrogen, phosphorus, iron, silicon, alkalinity, oxygen and lithogenic matter and associated plankton food web dynamics. More details about the model setup are described in Liu et al. (2019) and Liu et al. (2021). This work was part of a PMEL-led project "A Pilot BGC Argo Float Array in the California Current Large Marine Ecosystem" funded by NOAA Research. This dataset contains dissolved oxygen, nitrate, temperature and salinity data interpolated to monthly means with 1˚ latitude/longitude horizontal resolution, between 1965-2017.</p> <p>References:</p> <p> </p> <p>Adcroft, A., Anderson, W., Blanton, C., Bushuk, M., Dufour, C.O., Dunne, J.P., Griffies, S.M. et al. (2019). The GFDL Global Ocean and Sea Ice Model OM4.0: Model description and simulation features. Journal of Advances in Modeling Earth System, doi: 10.1029/2019MS001726</p> <p> </p> <p>Dai, A., T. Qian, K. E. Trenberth, and J. D Milliman, 2009: Changes in continental freshwater discharge from 1948-2004. J. Climate, 22, 2773-2791</p> <p> </p> <p>Dai, A., and K. E. Trenberth, 2002: Estimates of freshwater discharge from continents: Latitudinal and seasonal variations. J. Hydrometeorol., 3, 660-687</p> <p> </p> <p>Liu, X., Dunne, J.P., Stock, C. A., Harrison, M.J., Adcroft, A., Resplandy, L. (2019). Simulating Water Residence Time in the Coastal Ocean: A Global Perspective. Geophysical Research Letters, 46, 22, 13910-13919. Doi:10.1029/2019GL085097</p> <p> </p> <p>Liu, X., Stock, C.A., Dunne, J.P., Lee, M., Shevliakova, E., Malyshev, S., Milly, P.C.D (2021). Simulated Global Coastal Ecosystem Responses to a Half-Century Increase in River Nitrogen Loads.</p> <p> </p> <p>Stock, C. A., Dunne, J. P., Fan, S., Ginoux, P., John, J., Krasting, J. P., et al. (2020). Ocean biogeochemistry in GFDL's Earth System Model 4.1 and its response to increasing atmospheric CO<sub>2</sub>. <em>Journal of Advances in Modeling Earth Systems</em>, <em>12</em>, e2019MS002043. https://doi.org/10.1029/2019MS002043</p> <p> </p>
Dataset for "Study of reionization issues in the diagnostic neutral beam for the RFX-mod2 experiment"
<p>Dataset for the presentation <a href="../records/11368194">Study of reionization issues in the diagnostic neutral beam for the RFX-mod2 experiment</a></p>
diagnostic file output from MPAS-A(tmospheric) mode
<p>diagnostic file output from MPAS-A(tmospheric) component which is in an unstructured grid </p>
Dataset of Diagnostics Related Group (DRG) Data of Childbirth Cases in Romanian Hospitals in 2020
<p>This is a supplementary dataset generated for an analysis of Romanian C-Section rates in 2020, through the lens of Diagnosis-Related-Groups (DRG) payment systems. </p>
Figure 1 in Prevalence of Blastocystis sp. in Morocco: Comparative assessment of three diagnostic methods and characterization of parasite forms in Jones' culture medium
Figure 1. Dispersion of intestinal parasitic species among infected individuals.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.