Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
4,669
datasets available to search
ShareScore release 0.9.0
Dataset results
4,669 results for “Environment;”
The Optimal Species Richness Environments for Human Populations
<p>This supporting document should allow one to recreate the analysis performed as part of “The optimal species richness environments for human populations, ” By Freeman et al. 2018 Submitted to PNAS July 2018. The annotated scripts in this directory (RichnessSIScripts.pdf) contain code to replicate the analysis, as well as code for additional analyses not included in the main paper or supplemental information. To replicate the analysis, one can either analyze the data files provided or build their own data set. As discussed in the main body of the text, we built three data sets following the procedures outlined by Tallavaara et al. (2017) for linking species richness values, net primary productivity and pathogen stress to each ethnographic case. We do not replicate the scripts provided by Tallavaara et al.(2017) as these are available, clear and should be cited when used.To replicate our analysis, one needs to set their working directory in R to the file location that contains the data files. There are 11 files that follow the naming convention “name.csv.” The 11 files are “MainFinal.csv”. “AGPOP3Eco.csv”, “HGFEM4R.csv”, “AGPOPClass.csv”, “CountryMeansEco2.csv”, “AGPOP3EcoH.csv”, “AGPOP3EcoL.csv”, “HiHG.csv”, “LowHG,csv”, “CountryMeansEco2H.csv”, and “CountryMeansEco2L.csv”. The first five files are the main files, the second six files are divided into high and low species richness environments by economy type for convenience. In each file, the variables are defined as follows:</p> <p>1. Group/Country–name of the ethnographic society of country</p> <p>2. Latitude–the latitude at the geographic center of a group’s territory or a country’s territory.</p> <p>3. Longitude–the longitude at the geographic center of a group’s territory or a country’s territory.</p> <p>4. Class–an ordinal ranking of wealth and status differentiation among the hunter-gatherer and agriculturalists societies (see main text for more details)</p> <p>5. Class2–an binary ranking of wealth and status differentiation among the hunter-gatherer and agriculturalists societies (see main text for more details).</p> <p>6. ECI–The average economic complexity index since 1973 as measured among modern countries.</p> <p>7. DENSITY–Population density in people per square kilometer. This is a point in time estimatefor hunter-gatherer and agricultural groups and an average density since 1973 among nation states.</p> <p>8. LnDENSITY–The natural log of population density</p> <p>9. npp–net primary productivity estimated at the center of each group’s territory</p> <p>10. npp2-Net primary productivity squared</p> <p>11. biodiv–Standardized estimate of species richness at the center of each group’s range.</p> <p>12. biodiv2–Species richness *100 ad squared.</p> <p>13. pathos–Index of pathogen stress at the center of a group’s territory.</p> <p>14. DivDiff–The absolute value of species richness-the species richness value of peak population density (values identified in Fig. 2 of the main manuscript).1</p> <p>5. ID–A nominal variable that denotes economy type. HG=hunter-gatherer, AG=subsistence agriculturalist, IND=modern nation state</p> <p> </p> <p>Tallavaara, M., J. T. Eronen, and M. Luoto2017. Supporting data and script for ”productivity, biodiversity, and pathogens influence the global hunter-gatherer population density” (Tallavaara et al. pnas 2018).<a href="https://doi.org/10.5281/zenodo.1167852">https://doi.org/10.5281/zenodo.1167852</a></p>
Agriculture - General: Natural Resources and Environment 2
<p>Original data comes from a project which takes or took place as part of the DFG priority program “Exploratories for large-scale and long-term functional biodiversity research”. The data is stored together with descriptive metadata, in combination called a dataset, in the project repository (<a href="https://www.bexis.uni-jena.de">https://www.bexis.uni-jena.de</a>). Species information was extracted from that original dataset. The second paragraph is part of the metadata of the original dataset.The soil macrofauna on selected and avaialable EPs and VIPs was sampled in Spring and Autumn 2008 to relate land-use to soil diversity.</p> <p>Birkhofer K (2016). Species Soil Macrofauna 2008. Biodiversity Exploratories. Occurrence dataset <a href="https://doi.org/10.15468/frzxwp">https://doi.org/10.15468/frzxwp</a> accessed via GBIF.org</p>
Agriculture - General: Natural Resources and Environment
<p>Original data comes from a project which takes or took place as part of the DFG priority program “Exploratories for large-scale and long-term functional biodiversity research”. The data is stored together with descriptive metadata, in combination called a dataset, in the project repository (<a href="https://www.bexis.uni-jena.de">https://www.bexis.uni-jena.de</a>). Species information was extracted from that original dataset. The second paragraph is part of the metadata of the original dataset.‘Sammelarten" sind durch agg= Aggregate oder total gekennzeichnet. Sie umfassen jene Taxa, die teilweise bis zur Kleinart, Subspecies oder Varietas bestimmt wurden, teilweise aber auch nur auf Gattungs- (… spec. (indet.)) oder Artebene. Taxonomie nach Wisskirchen,Haeupler (1998)Standardliste für Deutschland. Lebensformen nach Raunkiaer, C. (1910): Statistik der Lebensformen als Grundlage für die biologische Pflanzengeographie.-Beih. Biol. Cbl. 27 II, 170 - 206d. Rote Liste: KORNECK, D., SCHNITTLER, M., VOLLMER, I. (1996): Rote Liste der Farn- und Blütenpflanzen (Pteridophyta et Spermatophyta) Deutschlands. – LUDWIG, G., SCHNITTLER, M. [Hrsg.]: Rote Listen gefährdeter Pflanzen Deutschlands. – Schriftenr. Vegetationskd. 28: 21–187, Bundesamt für Naturschutz, Bonn.’</p> <p>Socher S (2016). vegetation releves on grassland gridplots 2007-2009. Biodiversity Exploratories. Occurrence dataset <a href="https://doi.org/10.15468/dmjxfo">https://doi.org/10.15468/dmjxfo</a> accessed via GBIF.org</p>
Agriculture - General: Natural Resources and Environment, Plant Production and Protection
<p>Original data comes from a project which takes or took place as part of the DFG priority program “Exploratories for large-scale and long-term functional biodiversity research”. The data is stored together with descriptive metadata, in combination called a dataset, in the project repository (<a href="https://www.bexis.uni-jena.de">https://www.bexis.uni-jena.de</a>). Species information was extracted from that original dataset. The second paragraph is part of the metadata of the original <a href="<a href="http://dataset.in/">http://dataset.in/</a>">dataset.In this project we investigate seed bank and bryophyte propagule content in top soil in grasslands. Müller J (2016). Seed bank grassland. Biodiversity Exploratories. Occurrence dataset <a href="https://doi.org/10.15468/jax26w">https://doi.org/10.15468/jax26w</a> accessed via GBIF.org</p>
Data for: Why do phylogenomic analyses of early animal evolution continue to disagree? Sites in different structural environments yield different answers
<p>Supporting data for "Why do phylogenomic analyses of early animal evolution continue to disagree? Sites in different structural environments yield different answers" submitted by A Pandey and EL Braun. File is a gzipped tarball including protein multiple sequence alignments, phylogenetic trees, and other supporting data; see included README for details.</p>
SINS database - Node 4 - Daily activities in a home environment recorded using a Acoustic Sensor Network
<p>The SINS database contains continuous recordings of a single person living in a vacation home over a period of one week. It was collected using a network of 13 microphone arrays distributed over the entire home. The microphone array consists of 4 linearly arranged microphones.Recordings were manually annotated on the level of daily activities performed in the environment.<br> <br> To obtain more information on the database please visit <a href="https://github.com/KULeuvenADVISE/SINS_database">this website</a> and read the published paper.<br> <strong>Please read to license file (available in this repository) before using the database.</strong><br> <br> When using this database you should <strong>cite the following paper</strong>:<br> Gert Dekkers, Steven Lauwereins, Bart Thoen, Mulu Weldegebreal Adhana, Henk Brouckxon, Toon van Waterschoot, Bart Vanrumste, Marian Verhelst, and Peter Karsmakers, The SINS database for detection of daily activities in a home environment using an acoustic sensor network, Proceedings of the Detection and Classification of -Acoustic Scenes and Events 2017 Workshop (DCASE2017), pp 32–36, November 2017.</p>
SINS database - Node 7 - Daily activities in a home environment recorded using a Acoustic Sensor Network
<p>The SINS database contains continuous recordings of a single person living in a vacation home over a period of one week. It was collected using a network of 13 microphone arrays distributed over the entire home. The microphone array consists of 4 linearly arranged microphones.Recordings were manually annotated on the level of daily activities performed in the environment.<br> <br> To obtain more information on the database please visit <a href="https://github.com/KULeuvenADVISE/SINS_database">this website</a> and read the published paper.<br> <strong>Please read to license file (available in this repository) before using the database.</strong><br> <br> When using this database you should <strong>cite the following paper</strong>:<br> Gert Dekkers, Steven Lauwereins, Bart Thoen, Mulu Weldegebreal Adhana, Henk Brouckxon, Toon van Waterschoot, Bart Vanrumste, Marian Verhelst, and Peter Karsmakers, The SINS database for detection of daily activities in a home environment using an acoustic sensor network, Proceedings of the Detection and Classification of -Acoustic Scenes and Events 2017 Workshop (DCASE2017), pp 32–36, November 2017.</p>
SINS database - Node 6 - Daily activities in a home environment recorded using a Acoustic Sensor Network
<p>The SINS database contains continuous recordings of a single person living in a vacation home over a period of one week. It was collected using a network of 13 microphone arrays distributed over the entire home. The microphone array consists of 4 linearly arranged microphones.Recordings were manually annotated on the level of daily activities performed in the environment.<br> <br> To obtain more information on the database please visit <a href="https://github.com/KULeuvenADVISE/SINS_database">this website</a> and read the published paper.<br> <strong>Please read to license file (available in this repository) before using the database.</strong><br> <br> When using this database you should <strong>cite the following paper</strong>:<br> Gert Dekkers, Steven Lauwereins, Bart Thoen, Mulu Weldegebreal Adhana, Henk Brouckxon, Toon van Waterschoot, Bart Vanrumste, Marian Verhelst, and Peter Karsmakers, The SINS database for detection of daily activities in a home environment using an acoustic sensor network, Proceedings of the Detection and Classification of -Acoustic Scenes and Events 2017 Workshop (DCASE2017), pp 32–36, November 2017.</p>
SINS database - Node 12 - Daily activities in a home environment recorded using a Acoustic Sensor Network
<p>The SINS database contains continuous recordings of a single person living in a vacation home over a period of one week. It was collected using a network of 13 microphone arrays distributed over the entire home. The microphone array consists of 4 linearly arranged microphones.Recordings were manually annotated on the level of daily activities performed in the environment.<br> <br> To obtain more information on the database please visit <a href="https://github.com/KULeuvenADVISE/SINS_database">this website</a> and read the published paper.<br> <strong>Please read to license file (available in this repository) before using the database.</strong><br> <br> When using this database you should <strong>cite the following paper</strong>:<br> Gert Dekkers, Steven Lauwereins, Bart Thoen, Mulu Weldegebreal Adhana, Henk Brouckxon, Toon van Waterschoot, Bart Vanrumste, Marian Verhelst, and Peter Karsmakers, The SINS database for detection of daily activities in a home environment using an acoustic sensor network, Proceedings of the Detection and Classification of -Acoustic Scenes and Events 2017 Workshop (DCASE2017), pp 32–36, November 2017.</p>
SINS database - Node 3 - Daily activities in a home environment recorded using a Acoustic Sensor Network
<p>The SINS database contains continuous recordings of a single person living in a vacation home over a period of one week. It was collected using a network of 13 microphone arrays distributed over the entire home. The microphone array consists of 4 linearly arranged microphones.Recordings were manually annotated on the level of daily activities performed in the environment.<br> <br> To obtain more information on the database please visit <a href="https://kuleuvenadvise.github.io/SINS_database/">this website</a> and read the published paper.<br> <strong>Please read to license file (available in this repository) before using the database.</strong><br> <br> When using this database you should <strong>cite the following paper</strong>:<br> Gert Dekkers, Steven Lauwereins, Bart Thoen, Mulu Weldegebreal Adhana, Henk Brouckxon, Toon van Waterschoot, Bart Vanrumste, Marian Verhelst, and Peter Karsmakers, The SINS database for detection of daily activities in a home environment using an acoustic sensor network, Proceedings of the Detection and Classification of -Acoustic Scenes and Events 2017 Workshop (DCASE2017), pp 32–36, November 2017.</p>
SINS database - Node 13 - Daily activities in a home environment recorded using a Acoustic Sensor Network
<p>The SINS database contains continuous recordings of a single person living in a vacation home over a period of one week. It was collected using a network of 13 microphone arrays distributed over the entire home. The microphone array consists of 4 linearly arranged microphones.Recordings were manually annotated on the level of daily activities performed in the environment.<br> <br> To obtain more information on the database please visit <a href="https://github.com/KULeuvenADVISE/SINS_database">this website</a> and read the published paper.<br> <strong>Please read to license file (available in this repository) before using the database.</strong><br> <br> When using this database you should <strong>cite the following paper</strong>:<br> Gert Dekkers, Steven Lauwereins, Bart Thoen, Mulu Weldegebreal Adhana, Henk Brouckxon, Toon van Waterschoot, Bart Vanrumste, Marian Verhelst, and Peter Karsmakers, The SINS database for detection of daily activities in a home environment using an acoustic sensor network, Proceedings of the Detection and Classification of -Acoustic Scenes and Events 2017 Workshop (DCASE2017), pp 32–36, November 2017.</p>
SINS database - Node 10 - Daily activities in a home environment recorded using a Acoustic Sensor Network
<p>The SINS database contains continuous recordings of a single person living in a vacation home over a period of one week. It was collected using a network of 13 microphone arrays distributed over the entire home. The microphone array consists of 4 linearly arranged microphones.Recordings were manually annotated on the level of daily activities performed in the environment.<br> <br> To obtain more information on the database please visit <a href="https://github.com/KULeuvenADVISE/SINS_database">this website</a> and read the published paper.<br> <strong>Please read to license file (available in this repository) before using the database.</strong><br> <br> When using this database you should <strong>cite the following paper</strong>:<br> Gert Dekkers, Steven Lauwereins, Bart Thoen, Mulu Weldegebreal Adhana, Henk Brouckxon, Toon van Waterschoot, Bart Vanrumste, Marian Verhelst, and Peter Karsmakers, The SINS database for detection of daily activities in a home environment using an acoustic sensor network, Proceedings of the Detection and Classification of -Acoustic Scenes and Events 2017 Workshop (DCASE2017), pp 32–36, November 2017.</p>
SINS database - Node 9 - Daily activities in a home environment recorded using a Acoustic Sensor Network
<p>The SINS database contains continuous recordings of a single person living in a vacation home over a period of one week. It was collected using a network of 13 microphone arrays distributed over the entire home. The microphone array consists of 4 linearly arranged microphones.Recordings were manually annotated on the level of daily activities performed in the environment.<br> <br> To obtain more information on the database please visit <a href="https://github.com/KULeuvenADVISE/SINS_database">this website</a> and read the published paper.<br> <strong>Please read to license file (available in this repository) before using the database.</strong><br> <br> When using this database you should <strong>cite the following paper</strong>:<br> Gert Dekkers, Steven Lauwereins, Bart Thoen, Mulu Weldegebreal Adhana, Henk Brouckxon, Toon van Waterschoot, Bart Vanrumste, Marian Verhelst, and Peter Karsmakers, The SINS database for detection of daily activities in a home environment using an acoustic sensor network, Proceedings of the Detection and Classification of -Acoustic Scenes and Events 2017 Workshop (DCASE2017), pp 32–36, November 2017.</p>
SINS database - Node 2 - Daily activities in a home environment recorded using a Acoustic Sensor Network
<p>The SINS database contains continuous recordings of a single person living in a vacation home over a period of one week. It was collected using a network of 13 microphone arrays distributed over the entire home. The microphone array consists of 4 linearly arranged microphones.Recordings were manually annotated on the level of daily activities performed in the environment.<br> <br> To obtain more information on the database please visit <a href="https://github.com/KULeuvenADVISE/SINS_database">this website</a> and read the published paper.<br> <strong>Please read to license file (available in this repository) before using the database.</strong><br> <br> When using this database you should <strong>cite the following paper</strong>:<br> Gert Dekkers, Steven Lauwereins, Bart Thoen, Mulu Weldegebreal Adhana, Henk Brouckxon, Toon van Waterschoot, Bart Vanrumste, Marian Verhelst, and Peter Karsmakers, The SINS database for detection of daily activities in a home environment using an acoustic sensor network, Proceedings of the Detection and Classification of -Acoustic Scenes and Events 2017 Workshop (DCASE2017), pp 32–36, November 2017.</p>
SINS database - Node 8 - Daily activities in a home environment recorded using a Acoustic Sensor Network
<p>The SINS database contains continuous recordings of a single person living in a vacation home over a period of one week. It was collected using a network of 13 microphone arrays distributed over the entire home. The microphone array consists of 4 linearly arranged microphones.Recordings were manually annotated on the level of daily activities performed in the environment.<br> <br> To obtain more information on the database please visit <a href="https://github.com/KULeuvenADVISE/SINS_database">this website</a> and read the published paper.<br> <strong>Please read to license file (available in this repository) before using the database.</strong><br> <br> When using this database you should <strong>cite the following paper</strong>:<br> Gert Dekkers, Steven Lauwereins, Bart Thoen, Mulu Weldegebreal Adhana, Henk Brouckxon, Toon van Waterschoot, Bart Vanrumste, Marian Verhelst, and Peter Karsmakers, The SINS database for detection of daily activities in a home environment using an acoustic sensor network, Proceedings of the Detection and Classification of -Acoustic Scenes and Events 2017 Workshop (DCASE2017), pp 32–36, November 2017.</p>
Database of movement behavior and EEG in virtual audiovisual everyday-life environments for hearing aid research
<p>This database contains movement behavior (head, eye, torso) and EEG signals of 21 young normal-hearing (11 male, 11 female, mean age 25 +/- 3.6 years) and 19 elderly normal-hearing subjects (9 male, 12 female, mean age 69 +/- 5.4 years) measured in virtual audiovisual listening environments in the laboratory. The virtual audiovisual environments that were used are: a living room, a lecture hall, a cafeteria, a street and a train station. The video and audio material for the environments is also available (see Related identifiers). The methods and an analysis of the movement behavior are described in Hendrikse et al. (2019). The supplementary materials to this paper that are published here include plots of the gaze trajectories of the subjects in all environments, plotted separately for the young and elderly subjects so that they can be compared, and histograms of the head-, eye- and torso-rotation for the environments that were not included in the paper.</p>
SINS database - Node 11 - Daily activities in a home environment recorded using a Acoustic Sensor Network
<p>The SINS database contains continuous recordings of a single person living in a vacation home over a period of one week. It was collected using a network of 13 microphone arrays distributed over the entire home. The microphone array consists of 4 linearly arranged microphones.Recordings were manually annotated on the level of daily activities performed in the environment.<br> <br> To obtain more information on the database please visit <a href="https://github.com/KULeuvenADVISE/SINS_database">this website</a> and read the published paper.<br> <strong>Please read to license file (available in this repository) before using the database.</strong><br> <br> When using this database you should <strong>cite the following paper</strong>:<br> Gert Dekkers, Steven Lauwereins, Bart Thoen, Mulu Weldegebreal Adhana, Henk Brouckxon, Toon van Waterschoot, Bart Vanrumste, Marian Verhelst, and Peter Karsmakers, The SINS database for detection of daily activities in a home environment using an acoustic sensor network, Proceedings of the Detection and Classification of -Acoustic Scenes and Events 2017 Workshop (DCASE2017), pp 32–36, November 2017.</p>
Dataset: SiNGA Simulation of cAMP sink development in restricted and unrestriced environments.
<p>The setup files for the simulation of cAMP sink development in restricted and unrestricted environments. The results of the simulations were first presented on the 4th Central German Meeting on Bioinforatics 2019.</p> <p>To run a simulation the desired simulation setup file must be located in the same directory as the "singa-run.jar" and must be named "simulation_setup.json". Afterwards the simulation can be run using the "java -jar singa-run.jar" command on any system with at least Java 8 installed. Simulation parameters may be altered by changing the simulation setup file. The "singa-run" jar in this depository automatically runs all simulations resulting from all combinations of the "alternative values" annotated to concentrations or features.</p> <p>Results are saved in an "observations" folder that is created in the same directory. Each simulation creates one folder containing the variations used and the trajectory of the simulation.</p> <p>More information are available on the <a href="https://github.com/singa-bio/singa">SiNGA github</a>.</p>
Multi-Task Regression-based Learning for Autonomous Unmanned Aerial Vehicle Flight Control within Unstructured Outdoor Environments [dataset]
<p>This dataset is related to "Multi-Task Regression-based Learning for Autonomous Unmanned Aerial Vehicle Flight Control within Unstructured Outdoor Environments" in IEEE RA-L,2019.</p> <p> </p> <p>Data Capture<br> ========================<br> Data is obtained by manually flying the UAV through the redwood forest environment using a FrSky Taranis (Plus) Digital Telemetry Radio System. In total, 81,674 frames were captured together with the flight behaviour that comprehends flights under and above the forest canopy, navigation inside caves and on river beds, lakes and mountains.</p> <p> </p> <p>Folder Structure<br> ========================<br> |-manual_0 - manual_5: sequences containing training data</p> <p>|-test_0 - sequences containing testing data</p> <p> </p> <p>Data Protection<br> ========================<br> Gathered by simulated flight using Microsoft AirSim (2019) and released in accordance with MSR Aerial Information and Robotics Simulator (AirSim) lisence, which is described in details bellow:</p> <p> </p> <blockquote> <p>The MIT License (MIT)</p> <p>MSR Aerial Informatics and Robotics Platform<br> MSR Aerial Informatics and Robotics Simulator (AirSim)<br> Copyright (c) Microsoft Corporation<br> All rights reserved.<br> MIT License</p> <p>Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the ""Software""), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions:<br> The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software.<br> THE SOFTWARE IS PROVIDED *AS IS*, WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.</p> </blockquote>
An Attribute-Based Access Control model in RFID systems based on blockchain Decentralized Applications for healthcare environments (video demonstration)
<p>An Attribute-Based Access Control model in RFID systems based on blockchain Decentralized Applications for healthcare environments.</p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.