Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
520
datasets available to search
ShareScore release 0.9.0
Dataset results
520 results for “Host interactions”
Host and pathogen interaction: time course [C. albicans]
GEO Series GSE32117. Candida albicans. 27 samples. Type: Expression profiling by array.
CRISPR-cas cas7 influences the host-pathogen interaction of Porphyromonas gingivalis
GEO Series GSE300980. Porphyromonas gingivalis. 12 samples. Type: Expression profiling by high throughput sequencing.
Trans-Golgi protein TVP23B regulates host-microbe interactions via Paneth cell homeostasis and Goblet cell glycosylation
GEO Series GSE224516. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Global Analysis of the Transcriptional Response of Whitefly to Entomopathogenic Fungi Beauveria bassiana Reveals New Insights on Host-Pathogen Interactions
GEO Series GSE38108. Bemisia tabaci. 3 samples. Type: Expression profiling by high throughput sequencing.
The transcription and translation landscapes during human cytomegalovirus infection reveal novel host-pathogen interactions
GEO Series GSE69906. Homo sapiens. 14 samples. Type: Expression profiling by high throughput sequencing; Other.
Global gene expression analysis of the zoonotic parasite Trichinella spiralis revealed novel genes in host parasite interaction
GEO Series GSE39151. Trichinella spiralis. 3 samples. Type: Expression profiling by high throughput sequencing.
Acetylated microtubules refine cytomegalovirus interactions with and remodeling of host chromatin [RNA-seq]
GEO Series GSE284781. Homo sapiens. 24 samples. Type: Expression profiling by high throughput sequencing.
Dual oxic-anoxic co-culture enables direct study of host-anaerobe interactions at the airway epithelial interface
GEO Series GSE218124. Homo sapiens. 16 samples. Type: Expression profiling by high throughput sequencing.
Tumor-Host Signaling Interaction Reveals a Systemic, Age-Dependent Splenic Immune Influence on Tumor Development [control mice]
GEO Series GSE73450. Mus musculus. 40 samples. Type: Expression profiling by array.
Dissecting the immunogenicity of RD1-recombinant live tuberculosis vaccine candidates studying host-pathogen interaction in human primary dendritic cells
GEO Series GSE62423. Homo sapiens. 24 samples. Type: Expression profiling by array.
Characterization of antibiotic resistance and host-microbiome interactions in the human upper respiratory tract during influenza infection [16s rRNA gene V4 region]
GEO Series GSE126900. human metagenome. 34 samples. Type: Other.
SARS-CoV-2 Nucleocapsid protein attenuates stress granule formation and interacts directly with mRNAs to impair host stress response (RNA-Seq)
GEO Series GSE171009. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Malaria Host Pathogen Interaction Center Experiment 03: Host and parasite gene transcript abundance measures from whole blood for Macaca mulatta infected with Plasmodium coatneyi Hackeri strain from 7
GEO Series GSE103259. Macaca mulatta; Plasmodium coatneyi. 35 samples. Type: Expression profiling by high throughput sequencing.
Global transcriptomic analysis of bacteriophage-host interactions between Kayvirus therapeutic phage and Staphylococcus aureus
GEO Series GSE190637. Staphylococcus aureus. 42 samples. Type: Expression profiling by high throughput sequencing.
Functional genomic analyses of Bifidobacterium bifidum PRL2010 highlight how this microorganism interact with the human host
GEO Series GSE36442. Bifidobacterium bifidum PRL2010; Bifidobacterium bifidum. 12 samples. Type: Expression profiling by array.
Transcriptional responses of fungi (Rhizopus microsporus host [ATCC5 2813] and non-host [ATCC 11559] isolates) and bacteria (Burkholderia sp B13 ) to interaction with each other at a distance (pre-con
GEO Series GSE98095. Rhizopus microsporus ATCC 52813; Burkholderia sp. b13. 24 samples. Type: Expression profiling by high throughput sequencing.
Combined transcriptional profiling during systemic candidiasis reveals organ-specific host-pathogen interactions [mouse tissues 8 h]
GEO Series GSE83681. Mus musculus. 9 samples. Type: Expression profiling by array.
Metabolic modeling reveals the aging-associated decline of host-microbiome metabolic interactions in mice
GEO Series GSE278548. Mus musculus. 119 samples. Type: Expression profiling by high throughput sequencing.
Host-microbiota interaction is regulated by skin autonomous production of antibodies
GEO Series GSE250572. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Dynamics of phage-host interactions in Bacteroides fragilis resolved by single-cell transcriptomics [scRNA-Seq data]
GEO Series GSE309504. Bacteroides fragilis. 3 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.