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641
datasets available to search
ShareScore release 0.9.0
Dataset results
641 results for “Protein interaction”
An ancient protein-DNA interaction underlying metazoan sex determination
GEO Series GSE64892. Homo sapiens; Mus musculus. 7 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Cohesin and Polycomb proteins functionally interact to control transcription at silenced, restrained, and active genes
GEO Series GSE42106. Drosophila melanogaster. 28 samples. Type: Expression profiling by array; Genome binding/occupancy profiling by genome tiling array.
Transcriptome-wide ribonuclease footprinting to identify RNA-protein interaction sites
GEO Series GSE57881. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
RBPscan: A Quantitative, In Vivo Tool for Profiling RNA-Binding Protein Interactions.
GEO Series GSE285312. Danio rerio; Homo sapiens. 21 samples. Type: Other.
Co-immunoprecipitation of the small DUF1127 protein RSP_6037xFLAG and pRK0557_3xFLAG for RNA interaction
GEO Series GSE145045. Cereibacter sphaeroides 2.4.1. 4 samples. Type: Other.
Quantifying RNA-Protein Interactions Characterizes Recurrent Mutationsin RNA Binding Proteins in Cancer
GEO Series GSE154168. Homo sapiens. 92 samples. Type: Expression profiling by high throughput sequencing.
Global Analysis of the RNA-Protein Interaction and RNA Secondary Structure Landscapes Identifies Dynamic Changes During Mammalian Erythropoiesis
GEO Series GSE142242. Mus musculus. 24 samples. Type: Other.
IT-scC&T-seq streamlines scalable, parallel profiling of protein-DNA interactions in single cells
GEO Series GSE299567. Mus musculus; Homo sapiens. 17 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Cell-type-specific interacting proteins collaborate to regulate the timing of Cyclin B protein expression in male meiotic prophase
GEO Series GSE247388. Drosophila melanogaster. 6 samples. Type: Other; Expression profiling by high throughput sequencing.
Transcriptome-wide mapping of RNA:protein interactions of three SR proteins in HeLa cells by iCLIP
GEO Series GSE113813. Homo sapiens. 10 samples. Type: Other.
Haploinsufficiency of Hedgehog interacting protein causes increased emphysema induced by cigarette smoke through network rewiring
GEO Series GSE65124. Mus musculus. 24 samples. Type: Expression profiling by array.
miR-126-5p by direct targeting of JNK-interacting protein-2 (JIP-2) plays a key role in Theileria-infected macrophage virulence
GEO Series GSE97706. Bos taurus. 17 samples. Type: Non-coding RNA profiling by high throughput sequencing.
The B-cell CLL/lymphoma 7 (BCL7) protein family members drive gene expression changes via interactions with the Brahma Related Gene 1 (BRG1) Helicase-Sant Associated domain (HSA) domain [CUT&RUN]
GEO Series GSE188729. Homo sapiens. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Mapping snoRNA-target RNA interactions in an RNA binding protein-dependent manner with chimeric eCLIP [chimeric eCLIP]
GEO Series GSE277414. Mus musculus; Homo sapiens. 32 samples. Type: Other.
Oligonucleotide-directed proximity-interactome mapping (O-MAP): A unified method for discovering RNA-interacting proteins, transcripts and genomic loci in situ [Xist OMAP RIP]
GEO Series GSE217565. Mus musculus x Mus spretus. 6 samples. Type: Expression profiling by high throughput sequencing; Other.
Co-profiling of in situ RNA-protein interactions and transcriptome in single cells and tissues [tissue]
GEO Series GSE278263. Mus musculus. 20 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide protein–DNA interaction site mapping using a double strand DNA-specific cytosine deaminase
GEO Series GSE200262. Pseudomonas aeruginosa PAO1. 15 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Peptide design by optimization on a data-parameterized protein interaction landscape
GEO Series GSE118147. Saccharomyces cerevisiae. 3 samples. Type: Other.
Genome-wide screening and identification of long noncoding RNAs and their interaction with protein coding RNAs in bladder urothelial cell carcinoma
GEO Series GSE51493. Homo sapiens. 15 samples. Type: Expression profiling by array; Non-coding RNA profiling by array.
Differentiating Drosophila female germ cells initiate Polycomb silencing by regulating PRC2-interacting proteins
GEO Series GSE145282. Drosophila melanogaster. 73 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.