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FIGURE 2 in Population structuration and chromosomal features homogeneity in Parodon nasus (Characiformes: Parodontidae): A comparison between Lower and Upper Paraná River representatives
FIGURE 2 | Karyotypes of the four populations of Parodon nasus submitted to the C-banding procedure. A. Cuiabá River; B. Mogi-Guaçu River; C. Passa Cinco River; D. Paiol Grande stream. Scale bar = 10µm.
Representative snapshots of imaging sequences used in transcan_IDH-mutant_LGG_radiomics analysis
Open the record for dataset details and reuse information.
Setting up Methane Mitigation Measures for Indian Rice Fields: Representative Emissions and New Interpretations
<p>Setting up Methane Mitigation Measures for Indian Rice Fields: Representative Emissions and New Interpretations</p> <p>Fida Mohammad Sahil, Mukund Narayanan and Idhayachandhiran Ilampooranan*</p> <p>Department of Water Resources Development and Management, Indian Institute of Technology Roorkee, Roorkee, Uttarakhand, India – 247667.</p> <p>*Corresponding Author (Email: idhaya@wr.iitr.ac.in)</p> <p>This repository contains the code and datasets generated in this study accepted in Global Biogeochemical Cycles Journal.</p>
Online example database generated representing nuclear astrophysics models predictions of correlations between stable/stable abundances of specific isotopes.
<p>Library of figures created using the SIMPLE code (Stellar Interpretation for Meteoritic data and PLotting). The SIMPLE stellar database includes 18 core-collapse supernova models with 3 different initial masses of 15, 20, 25 solar masses, all of solar metallicity and non-rotating stars. The 6 sets are the following:</p> <ul> <li>Rauscher et al. 2002 [Ra02]<br>(<a href="https://ui.adsabs.harvard.edu/abs/2002ApJ...576..323R/abstract">https://ui.adsabs.harvard.edu/abs/2002ApJ...576..323R/abstract</a>),</li> <li>Pignatari et al. 2016 [Pi16]<br>(<a href="https://ui.adsabs.harvard.edu/abs/2016ApJS..225...24P/abstract">https://ui.adsabs.harvard.edu/abs/2016ApJS..225...24P/abstract</a>),</li> <li>Sieverdin et al. 2018 [Si18]<br>(<a href="https://ui.adsabs.harvard.edu/abs/2018ApJ...865..143S/abstract">https://ui.adsabs.harvard.edu/abs/2018ApJ...865..143S/abstract</a>),</li> <li>Limongi & Chieffi 2018 [LC18]<br>(<a href="https://ui.adsabs.harvard.edu/abs/2018ApJS..237...13L/abstract">https://ui.adsabs.harvard.edu/abs/2018ApJS..237...13L/abstract</a>),</li> <li>Ritter et al. 2018 [Ri18]<br>(<a href="https://ui.adsabs.harvard.edu/abs/2018MNRAS.480..538R/abstract">https://ui.adsabs.harvard.edu/abs/2018MNRAS.480..538R/abstract</a>),</li> <li>Lawson et al. 2022 [La22]<br>(<a href="https://ui.adsabs.harvard.edu/abs/2022MNRAS.511..886L/abstract">https://ui.adsabs.harvard.edu/abs/2022MNRAS.511..886L/abstract</a>)</li> </ul> <p>The figures can be divided into two types. The first shows the structure of the ejecta and the abundance of the selected isotopes. The layers are automatically detected using SIMPLE based on the abundances of the main fuels (H-1, He-4, C-12, O-16, Ne-20, Si-28) from the supernova model ejecta. The code names the different layers based on the schematic diagram in Schofield et al. 2022 (<a href="https://ui.adsabs.harvard.edu/abs/2022MNRAS.517.1803S/abstract">https://ui.adsabs.harvard.edu/abs/2022MNRAS.517.1803S/abstract</a>). <br>Ni and Fe isotopes are plotted in the figures. The abundances shown include the radiogenic contribution from unstable isotopes.</p> <p>The SIMPLE code is designed to compare stellar data with measurements from meteorites. To achieve this, abundances in mass fractions need to be converted into isotopic ratios using specific units. See Lugaro et al. 2023 (<a href="https://ui.adsabs.harvard.edu/abs/2023EPJA...59...53L/abstract">https://ui.adsabs.harvard.edu/abs/2023EPJA...59...53L/abstract</a>) for details. For the specific case of Ni64 ratios, in comparison with model data we report the measured meteoritic anomaly by Steele et al 2012 (<a href="https://ui.adsabs.harvard.edu/abs/2012ApJ...758...59S/abstract">https://ui.adsabs.harvard.edu/abs/2012ApJ...758...59S/abstract</a>) as a continuous horizontal line. The same is done for the Fe54 ratios, with reference measurements by Hopp et al 2022 (<a href="https://ui.adsabs.harvard.edu/abs/2022E%26PSL.57717245H/abstract">https://ui.adsabs.harvard.edu/abs/2022E%26PSL.57717245H/abstract</a>). </p> <p>In the database the abundance plots are identified as <strong>structure_<model refe<em>rence>_<initial mass>_<element>_<decayed or undecayed>.png</em></strong><em>. In particular, the available reference model options are Ra02, Pi16, Si18, LC18, Ri18, La22; the initial mass of the progenitors are 15, 20 or 25 (solar masses). The third part of the filenames are the plotted elements (in this case Ni or Fe) and then if they are decayed or undecayed. In this database we only consider the decayed species, which means that the radioactive isotopes whose decay can add to the abundance of the selected isotopes were considered. In this plots the x-axis represents the total mass from the core and the y-axis is the mass fraction on a logarithmic scale. For the slopes the same name scheme applies, but they are identified as <strong>slopes_<model reference>_<initial mass>_<element>_<decayed or undecayed></strong></em><strong>.png,</strong> and on the y-axis there are the slope values insteas of abundances.</p>
Linked collectors and determiners for: Heissiella donguri sp. nov. (Hemiptera: Heteroptera: Tingidae) feeding on Quercus gilva (Fagaceae): First representative of the genus from Japan.
Natural history specimen data linked to collectors and determiners held within, "Heissiella donguri sp. nov. (Hemiptera: Heteroptera: Tingidae) feeding on Quercus gilva (Fagaceae): First representative of the genus from Japan". Claims or attributions were made on Bionomia by volunteer Scribes, <a href="https://bionomia.net/dataset/3567f983-bfd1-49d0-9d87-81f5787c4e39">https://bionomia.net/dataset/3567f983-bfd1-49d0-9d87-81f5787c4e39</a> using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, <a href="https://gbif.org/dataset/3567f983-bfd1-49d0-9d87-81f5787c4e39">https://gbif.org/dataset/3567f983-bfd1-49d0-9d87-81f5787c4e39</a>. Formatted as a Frictionless Data package.
Linked collectors and determiners for: A new species of Polyamia DeLong (Hemiptera: Cicadellidae: Deltocephalinae: Deltocephalini) representing the first record of the genus from South America.
Natural history specimen data linked to collectors and determiners held within, "A new species of Polyamia DeLong (Hemiptera: Cicadellidae: Deltocephalinae: Deltocephalini) representing the first record of the genus from South America". Claims or attributions were made on Bionomia by volunteer Scribes, <a href="https://bionomia.net/dataset/cfb865bd-ba49-471b-92fa-4ee0e8843f11">https://bionomia.net/dataset/cfb865bd-ba49-471b-92fa-4ee0e8843f11</a> using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, <a href="https://gbif.org/dataset/cfb865bd-ba49-471b-92fa-4ee0e8843f11">https://gbif.org/dataset/cfb865bd-ba49-471b-92fa-4ee0e8843f11</a>. Formatted as a Frictionless Data package.
Linked collectors and determiners for: New records of Orussus minutus Middlekauff, 1983 (Hymenoptera: Orussidae) represent a significant western range expansion.
Natural history specimen data linked to collectors and determiners held within, "New records of Orussus minutus Middlekauff, 1983 (Hymenoptera: Orussidae) represent a significant western range expansion". Claims or attributions were made on Bionomia by volunteer Scribes, <a href="https://bionomia.net/dataset/c086e70f-8132-4558-b2d7-186c8926708e">https://bionomia.net/dataset/c086e70f-8132-4558-b2d7-186c8926708e</a> using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, <a href="https://gbif.org/dataset/c086e70f-8132-4558-b2d7-186c8926708e">https://gbif.org/dataset/c086e70f-8132-4558-b2d7-186c8926708e</a>. Formatted as a Frictionless Data package.
Linked collectors and determiners for: Description of a new species of the genus Ptychozoon (Squamata: Gekkonidae), representing a new national record of this genus from southern Yunnan Province, China.
Natural history specimen data linked to collectors and determiners held within, "Description of a new species of the genus Ptychozoon (Squamata: Gekkonidae), representing a new national record of this genus from southern Yunnan Province, China". Claims or attributions were made on Bionomia by volunteer Scribes, <a href="https://bionomia.net/dataset/9943d5c6-76c7-4459-a06d-37ff57abb34c">https://bionomia.net/dataset/9943d5c6-76c7-4459-a06d-37ff57abb34c</a> using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, <a href="https://gbif.org/dataset/9943d5c6-76c7-4459-a06d-37ff57abb34c">https://gbif.org/dataset/9943d5c6-76c7-4459-a06d-37ff57abb34c</a>. Formatted as a Frictionless Data package.
Linked collectors and determiners for: Polyzosteria cockroaches in Tasmania (Blattodea: Blattidae: Polyzosteriinae) represent a new, endemic species, with allopatric alpine and coastal sub-populations.
Natural history specimen data linked to collectors and determiners held within, "Polyzosteria cockroaches in Tasmania (Blattodea: Blattidae: Polyzosteriinae) represent a new, endemic species, with allopatric alpine and coastal sub-populations". Claims or attributions were made on Bionomia by volunteer Scribes, <a href="https://bionomia.net/dataset/72fbd015-d727-4e48-b8e1-54496db6c932">https://bionomia.net/dataset/72fbd015-d727-4e48-b8e1-54496db6c932</a> using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, <a href="https://gbif.org/dataset/72fbd015-d727-4e48-b8e1-54496db6c932">https://gbif.org/dataset/72fbd015-d727-4e48-b8e1-54496db6c932</a>. Formatted as a Frictionless Data package.
Data from: A de novo chromosome-level genome assembly of Coregonus sp. "Balchen": one representative of the Swiss Alpine whitefish radiation
<p>Salmonids are of particular interest to evolutionary biologists due to their incredible diversity of life-history strategies and the speed at which many salmonid species have diversified. In Switzerland alone, over 30 species of Alpine whitefish from the subfamily Coregoninae have evolved since the last glacial maximum, with species exhibiting a diverse range of morphological and behavioural phenotypes. This, combined with the whole genome duplication which occurred in the ancestor of all salmonids, makes the Alpine whitefish radiation a particularly interesting system in which to study the genetic basis of adaptation and speciation and the impacts of ploidy changes and subsequent rediploidization on genome evolution. Although well curated genome assemblies exist for many species within Salmonidae, genomic resources for the subfamily Coregoninae are lacking. To assemble a whitefish reference genome, we carried out PacBio sequencing from one wild-caught <i>Coregonus sp. "Balchen" </i>from Lake Thun to ~90x coverage. PacBio reads were assembled independently using three different assemblers, Falcon, Canu and wtdbg2 and subsequently scaffolded with additional Hi-C data. All three assemblies were highly contiguous, had strong synteny to a previously published <i>Coregonus</i>linkage map, and when mapping additional short-read data to each of the assemblies, coverage was fairly even across most chromosome-scale scaffolds. Here, we present the first <i>de novo</i>genome assembly for the Salmonid subfamily Coregoninae. The final 2.2 Gb wtdbg2 assembly included 40 scaffolds, an N50 of 51.9 Mb, and was 93.3% complete for BUSCOs. The assembly consisted of ~52% TEs and contained 44,525 genes.</p>
Figures 2-3 in A julid milliped in Chilean Patagonia, and a compilation of ordinal representatives in South America and associated islands (Diplopoda: Julida
Figures 2-3. Habitat at Puerto de Hambre. 2) Wet wooded grassland similar to where the milliped was discovered; the trees are Nothofagus?betuloides. 3) Dry shrubby grassland on slope leading to the Strait of Magellan, adjacent to the wetter site where the milliped was collected.
Figure 4 in A julid milliped in Chilean Patagonia, and a compilation of ordinal representatives in South America and associated islands (Diplopoda: Julida
Figure 4. Julida occurrences in South America and localities relevant to southern Patagonian diplopods;. BLACK: Dots, Cylindroiulus sp.?, Puerto San Julian, possible type locality for Propolyxenus patagonicus (Polyxenida/ ae). ¿, lower Santa Cruz River, possible type locality for P. patagonicus. BLUE: Triangle, C. britannicus; Star, C. truncorum; Dots, C. latestriatus. RED: Triangle, Brachyiulus pusillus; Dots, Nopoiulus kochii; Stars, unidentified Juloidea. Some markings denote two or more closely proximate sites; those in the Pacific Ocean west of Chile represent occurrences in the Juan Fernandez Islands. The bold arrows point to the location of Parque Nacional Alerces, Chubut Prov., Argentina.
Figure 1 in A julid milliped in Chilean Patagonia, and a compilation of ordinal representatives in South America and associated islands (Diplopoda: Julida
Figure 1. Lateral view of left side of the Patagonian cylindroiulinine julid; damaged section caused by handling with forceps. Photo courtesy of A. E. Bogan.
Figure 1. Pandirodesmus rutherfordi habitus. The arrow denotes a in The enigmatic milliped genus Pandirodesmus Silvestri 1932 and description of a new species from Tobago represented by males (Polydesmida: Leptodesmidea: Chelodesmidae: Chelodesminae: Pandirodesmini)
Figure 1. Pandirodesmus rutherfordi habitus. The arrow denotes a rounded accumulation of sand on the right anterior leg on segment 15.
Figures 5–10 in The enigmatic milliped genus Pandirodesmus Silvestri 1932 and description of a new species from Tobago represented by males (Polydesmida: Leptodesmidea: Chelodesmidae: Chelodesminae: Pandirodesmini)
Figures 5–10. Male paratypes of P. rutherfordi. 5) Partly volvated juvenile showing the uniformity of the thinner coating. 6) "Naked," fragmented, and probably freshly molted adult showing the natural exoskeletal color. 7) Anterior view of the head showing the clear, uncoated frons/clypeus/labrum and distal antennomeres. 8) Dorsal view of anterior tergites showing a ridge of accumulated sand (arrow) between the physically closer spines/ozopores on that metatergum. 9) Ventral view of the caudal end showing sand coatings on the sterna and legs (excepting tarsi), the alternating leg lengths, the more lateral origins of the anterior segmental legs, and the wider sterna between them. 10) Segment 7 of NMNH paratype showing protruded gonopods, encircled by dashed green line, in situ.
Figures 2–3. 2 in The enigmatic milliped genus Pandirodesmus Silvestri 1932 and description of a new species from Tobago represented by males (Polydesmida: Leptodesmidea: Chelodesmidae: Chelodesminae: Pandirodesmini)
Figures 2–3. 2) Stump where the first two series of P. rutherfordi were discovered. 3) Setting of the stump in secondary forest along Pirate's Bay Trail near Charlotteville, Tobago. The red circles in both figures enclose the surface areas, originally beneath bark, where P. rutherfordi was found.
Figures 11–14. Left gonopod. 11 in The enigmatic milliped genus Pandirodesmus Silvestri 1932 and description of a new species from Tobago represented by males (Polydesmida: Leptodesmidea: Chelodesmidae: Chelodesminae: Pandirodesmini)
Figures 11–14. Left gonopod. 11) Submedial view. 12) Subanterior view. 13) Sublateral view. 14) Subcaudal view. Coxa (black), prefemur (dark green), prefemoral process (light green), secondary branch (red), primary branch (light blue), solenomere (dark blue).
Figure 2 in A primitive representative of the Parabathynellidae (Bathynellacea, Syncarida) from the Yilgarn Craton of Western Australia
Figure 2. Billibathynella humphreysi sp. nov. (": holotype; ♀: allotype). (A) Right antennule " (dorsal); (B) right antenna " (dorsal); (C) labrum "; (D) left mandible " (ventral); (E) left maxillule " (dorsal); (F) left maxilla " (dorsal); (G) right and left thoracopods VIII ♀ (ventral); (H) left thoracopod VIII " (inner lateral); (I) right thoracopod VIII " (outer lateral). Scale bars: 0.1 mm.
Figure 5 in A primitive representative of the Parabathynellidae (Bathynellacea, Syncarida) from the Yilgarn Craton of Western Australia
Figure 5. Billibathynella humphreysi sp. nov. (holotype). (A) Right thoracopod VI " (frontal); (B) right thoracopod VII " (frontal). Scale bar: 0.5 mm.
Figure 4 in A primitive representative of the Parabathynellidae (Bathynellacea, Syncarida) from the Yilgarn Craton of Western Australia
Figure 4. Billibathynella humphreysi sp. nov. (holotype). (A) Right thoracopod II " (frontal); (B) right thoracopod III " (frontal); (C) right thoracopod IV " (frontal); (D) second segment of the endopod of the left thoracopod IV " (frontal); (E) exopod of the left thoracopod IV " (frontal); (F) right thoracopod V " (frontal). Scale bar: 0.5 mm.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.