Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
2,096
datasets available to search
ShareScore release 0.9.0
Dataset results
2,096 results for “Tracts”
Fig. 3 a–d in The female reproductive tract of Grallipeza sp. A (Diptera: Micropezidae)-large ventral receptacle substitutes for spermathecae convergently in small and widely separated dipteran clades
Fig. 3 a–d Grallipeza sp. Aventral receptacle. a Same specimen as in Fig. 2. bvr base of ventral receptacle, ce columnar epithelium in ventral vagina wall, sp1 and sp2 vestigial spermatheca 1 and 2, spd1 and spd2 ducts leading to the respective spermatheca, spg spermathecal gland cells. b–d Second specimen. b With DIC, note structured wall of ventral receptacle base. c With focus on right side of the organ. d With focus on left side of the organ. Asterisks indicate spermatozoa in entrance region. All figures to same scale. Bar 100 μm
Fig. 4 a–c in The female reproductive tract of Grallipeza sp. A (Diptera: Micropezidae)-large ventral receptacle substitutes for spermathecae convergently in small and widely separated dipteran clades
Fig. 4 a–c Grallipeza sp. A female reproductive tract, glandular tissues. a Spermathecae. hg hind gut, m muscles attaching spermathecal ducts to hind gut, sp1 and sp2 vestigial spermatheca 1 and 2, spg spermathecal gland cells. b Area of (likely glandular) columnar epithelium in ventral vagina wall. bvr base of ventral receptacle, ce columnar epithelium, spd2 duct leading to vestigial spermatheca 2. c Accessory gland. ag accessory gland reservoir, agd accessory gland duct, agp accessory gland pump. All figures to same scale. Bar 100 μm
Plate 1 in The ontogeny of the lower reproductive tract of the landsnail Helix aspersa (Gastropoda: Mollusca)
Plate 1 Photographs of the lower reproductive tract of Helix aspersa at each stage of development. Refer to Fig. 1 for corresponding illustrations
Fig. 2 in The ontogeny of the lower reproductive tract of the landsnail Helix aspersa (Gastropoda: Mollusca)
Fig. 2 The thin-plate spline bending energy of pairwise comparisons of adjacent developmental stages. 1= initial landmark deformations, 2 = straightening of flagellum; both of these events likely represent artificial morphological changes. Linear regression of log-transformed bending energies, without the problematic A-B and D2-E values, gives an r2 value of 0.9565
Corticoreticulospinal tract neurophysiology in an arm and hand muscle in healthy and stroke subjects: Data
<p>Supplemental data of the paper: Corticoreticulospinal tract neurophysiology in an arm and hand muscle in healthy and stroke subjects.</p> <p>This dataset contains the individual raw data for healthy (H) and stroke subjects.</p>
FIGURE 1. A in Protozoa in the digestive tract of wild herbivores in South Africa. I: Warthogs (Phacochoerus aethiopicus)
FIGURE 1. A. Telamodinium onyx. Length =90µm; Width = 37µm; L/W = 2.4. Note ciliary bands. B. Telamodinium onyx. Arrow shows skeletal plate which extentds up to anterior end of cell. C. Telamodinium onyx. Arrow shows macronucleus (38µm long). D. Megadinium aethiopicum. Length = 225µm; Width = 128µm; L/W = 1.76. Note the clubshaped macronucleus (Length = 120µm) shown by the arrow. E. Megadinium aethiopicum. Length = 225µm; Width = 133µm; L/W = 1.69; Macronucleus = 129µm. Macronucleus shown by bottom arrow. Cilia bands are also visible, shown by top arrow. F. Diplodinium dentatum. Length = 59µm; Width = 50µm; L/W = 1.18. Readily distinguished by its wide flange along the dorsal body edge, shown by arrow and posterior spines. G. Diplodinium dentatum. Arrows show the six short incurved caudal spines typical for this species. H. Teratodinium sphaeredon. Length = 130µm; Width = 109µm; L/ W = 1.19. Note the round body shape. Arrow indicates location of macronucleus (Length = 87µ m). I and J. Blepharoconus krugerensis. Length = 70µm; W = 47µm; L/W = 1.49. Arrows indicate location of cilia. Posterior ciliary tuft barely visible in J. K. Ophryoscolex purknjei. Length = 72µm; Width = 42µm; L/W = 1.71. Short main caudal spine shown by bottom arrow and dorsal cilia row by top arrow. L. Ophryoscolex purknjei. Circlets of secondary spines are shown by double arrow. Caudal spine by single arrow.
Fig. 13. Porrorhynchus species, female reproductive tract. A in Revision of the Southeast Asian Whirligig Beetle GenusPorrorhynchusLaporte, 1835 (Coleoptera: Gyrinidae: Gyrininae: Dineutini)
Fig. 13. Porrorhynchus species, female reproductive tract. A) P. landaisi, B) P. indicans, C) P. marginatus, D) P. depressus, E) P. misoolensis. More heavily sclerotized areas indicated in gray. Scale bars = 1 mm.
Fig. 8. Heterogyrus milloti, female reproductive tract. A in The Morphology and Behavior of the Endemic Malagasy Whirligig Beetle Heterogyrus milloti Legros, 1953 (Coleoptera: Gyrinidae: Heterogyrinae)
Fig. 8. Heterogyrus milloti, female reproductive tract. A) Ventral view, B) Lateral view. Scale bar = 0.75 mm.
Single-cell and spatial transcriptomics of cardiac neural crest reveal a dual role of vinculin in Tgf beta signaling and cell-extracellular matrix interaction during cardiac outflow tract development
<p>single-cell RNA-seq data analysis:</p> <p>all.cncc.combined.EMBO.mapped.Rdata: public CNCC single-cell RNA-seq data integration</p> <p>E13.5_CNCC_merged_updated.Rdata: single-cell RNA-seq data of E13.5 CNCC generated in Elly lab</p> <p>all.seurat.GFP.Rdata: scRNA-seq data with GFP detected</p> <p>visium.merge_AB.control.Rdata: R processed ST data for slice A and B</p> <p>visium.merge_CD.mutant.Rdata: R processed ST data for slice A and B</p> <p> </p>
Uncover a microbiota signature of upper respiratory tract in patients with SARS-CoV-2+
<p>This is the repository containing the code used to obtain the results shown in <a href="https://doi.org/10.1038/s41598-023-43040-x"><i><strong>Bellato M, Cappellato M, Longhin F, Del Vecchio C, Brancaccio G, Cattelan AM, Brun P, Salaris C, Castagliuolo I, Di Camillo B. "Uncover a microbiota signature of upper respiratory tract in patients with SARS-CoV-2+" Sci Rep 13, 16867 (2023)</strong></i></a>.</p><p>We characterized through 16S rDNA-seq the microbiota in the upper airways of 192 subjects with a positive nasopharyngeal swab for SARS-CoV-2 to identify a microbial signature predictive of disease progression. Patients were divided in groups based on the presence of symptoms, the level of pneumonia, and whether or not they needed oxygen therapy or intubation. </p><p>In the GitLab repository <a href="https://gitlab.com/sysbiobig/microbiomecovid/-/tree/v1.0">here</a> there are all the scripts used to perform the preprocessing step and the downstream analysis. The GitLab repository (version 1.0) contains also the Docker image <strong>microbiomecovid:1.0.0</strong> that can be used to reproduce the results shown in the paper (see the instruction <a href="https://gitlab.com/sysbiobig/microbiomecovid/-/tree/v1.0#reproduce-the-results-%EF%B8%8F">here</a>).</p><p>Here in Zenodo you can find the <strong>microbiomecovid_data.zip </strong>file containing two folders that need to be unzipped and put in the <i>microbiomecovid</i> local repository, downloaded from GitLab.</p><p>In particular, the <i><strong>original_data</strong></i> folder contains:</p><ul><li><i><strong>Raw_data</strong></i><strong>: </strong>a folder with two FASTQ files for each sample, i.e., forward (R1) and reverse (R2) reads.</li><li><strong>Metadata.xlsx: </strong>the table containing information on the - anonymized - subjects involved in the study.</li><li><strong>QC Report.pdf: </strong>The report provided by the sequencing center.</li></ul><p>Additionally, in the <i><strong>output</strong></i><strong> </strong>folder, the following items can be found:</p><ul><li><i><strong>Preprocessing</strong></i><strong>: </strong>a folder containing all the output file from step1 to step7, namely:<ul><li>create input data for QIIME2;</li><li>import data in QIIME2;</li><li>remove primers;</li><li>denoising and imputation;</li><li>taxonomy classification;</li><li>phylogenetic tree reconstruction;</li><li>collapse at specific taxonomic level and normalize data.</li></ul></li><li><i><strong>Analysis</strong></i><strong>: </strong>a folder containing all the output files form step8 to step10 namely:<ul><li>alpha and beta diversity results;</li><li><i><strong>DA_output</strong></i><strong>:</strong> a folder containing the differential abundance analysis performed for each taxonomic level and for each covariate;</li><li><i><strong>Network_output:</strong></i> a folder containing the sparCC and Cytoscape networks and results.</li></ul></li></ul><p>For more info about all the bioinformatic pipeline see the <a href="https://gitlab.com/sysbiobig/microbiomecovid/-/tree/v1.0#pipeline">GitLab repository</a><strong>.</strong></p><p>Remember to set the path as <i>ABSOLUTE_PATH_MICROBIOMECOVID.</i></p>
Rapid Point-of-care Bacteriuria and Microbial Susceptibility for Women With Suspected Uncomplicated Urinary Tract Infections: Diagnostic Accuracy in General Practice.
ClinicalTrials.gov study NCT06625268. IPD Sharing: NO. Countries: 1. Publications: 2.
Study of the Combination of DKN-01 and Nivolumab in Previously Treated Patients With Advanced Biliary Tract Cancer (BTC)
ClinicalTrials.gov study NCT04057365. IPD Sharing: YES. Countries: 1. Publications: 0.
Diagnostic Accuracy of Optical Coherence Tomography in Upper Urinary Tract Urothelial Carcinoma
ClinicalTrials.gov study NCT02326909. IPD Sharing: Not stated. Countries: 1. Publications: 1.
Questionnaire of Lower Urinary Tract Symptoms Among Women Before and After Surgical Correction of Uterine Prolapse
ClinicalTrials.gov study NCT06260436. IPD Sharing: NO. Countries: 1. Publications: 1.
MiniPDX-based Postoperative Adjuvant Therapy for Biliary Tract Cancer
ClinicalTrials.gov study NCT07156058. IPD Sharing: Not stated. Countries: 1. Publications: 25.
Bovine Lactoferrin as a Natural Regimen of Selective Decontamination of the Digestive Tract in Patients With Prolonged Mechanical Ventilation
ClinicalTrials.gov study NCT01535170. IPD Sharing: Not stated. Countries: 1. Publications: 17.
An Observational Study of Ertapenem in Outpatient Parenteral Antibiotic Therapy (OPAT) for Complicated Urinary Tract Infections.
ClinicalTrials.gov study NCT01173068. IPD Sharing: Not stated. Countries: 1. Publications: 3.
Efficacy and Safety of Tadalafil, Tamsulosin, and Their Combinations in Treating Lower Urinary Tract Symptoms in BPH Patients with Prostate Volumes ≤ 40 Ml: a Prospective Comparative Study
ClinicalTrials.gov study NCT06809205. IPD Sharing: NO. Countries: 1. Publications: 5.
Evaluation of Double Tract Reconstruction After Total Gastrectomy in Patients With Gastric Cancer
ClinicalTrials.gov study NCT00746161. IPD Sharing: Not stated. Countries: 1. Publications: 1.
Effects of a Cranberry Beverage on Women With Recent History of Urinary Tract Infections
ClinicalTrials.gov study NCT01776021. IPD Sharing: Not stated. Countries: 1. Publications: 4.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.