Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
537
datasets available to search
ShareScore release 0.9.0
Dataset results
537 results for “genome structure”
Genome-wide probing of RNA structure reveals active unfolding of mRNA structures in vivo
GEO Series GSE45803. Homo sapiens; Saccharomyces cerevisiae. 25 samples. Type: Other.
Neuronal DNA double-strand breaks lead to genome structural variations and 3D genome disruption in neurodegeneration [Mate-Pair]
GEO Series GSE227444. Mus musculus. 11 samples. Type: Other.
Chromatin structure marks cell-type and gender specific replication of the Drosophila genome
GEO Series GSE13328. Drosophila melanogaster. 25 samples. Type: Expression profiling by array; Genome binding/occupancy profiling by genome tiling array.
Genome structure and organization in mouse CD8 T cells [Hi-C-seq]
GEO Series GSE85515. Mus musculus. 3 samples. Type: Other.
Depletion of RUNX1/ETO in t(8;21) AML cells leads to genome-wide changes in chromatin structure and transcription factor binding
GEO Series GSE29225. Homo sapiens. 38 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by array; Methylation profiling by array.
Transcription elongation regulates genome 3D structure
GEO Series GSE103477. Homo sapiens. 253 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing; Other.
High-resolution 3D genome structures via single-cell Micro-C uncovers cohesin-mediated enhancer-promoter loops
GEO Series GSE281150. Homo sapiens. 829 samples. Type: Other.
Structural genomic variation analysis in patients with bone marrow failure using Illumina Infinium SNP Arrays [Illumina Quad610 Beadchip]
GEO Series GSE48483. Homo sapiens. 67 samples. Type: SNP genotyping by SNP array.
Triplexes are Dynamic DNA Secondary Structures Formed in vivo and Linked to Genome Instability
GEO Series GSE204808. Homo sapiens. 57 samples. Type: Other.
The three-dimensional structure of Epstein-Barr virus genome varies by latency type and is regulated by PARP1 enzymatic activity [RNA-Seq]
GEO Series GSE159836. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Epigenomic Landscape and 3D Genome Structure in Pediatric High-Grade Glioma
GEO Series GSE162976. Homo sapiens. 94 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Isolation and genome-wide characterization of cellular DNA:RNA triplex structures
GEO Series GSE120850. Homo sapiens. 42 samples. Type: Other.
Droplet-based high-throughput 3D genome structure mapping of single cells with simultaneous transcriptomics (b23-mouse-brain)
GEO Series GSE285809. Mus musculus. 1 samples. Type: Other.
G-Quadruplex structures are stable and detectable in human genomic DNA.
GEO Series GSE45241. Homo sapiens. 5 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Cell-of-origin specific 3D genome structure acquired during somatic cell reprogramming
GEO Series GSE76481. Mus musculus. 85 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other; Expression profiling by array.
The three-dimensional structure of the EBV genome plays a crucial role in regulating viral gene expression in EBVaGC [RNA-seq]
GEO Series GSE239994. Homo sapiens; human gammaherpesvirus 4. 3 samples. Type: Expression profiling by high throughput sequencing.
Multiplex generation and single cell analysis of structural variants in mammalian genomes
GEO Series GSE282636. Homo sapiens; Mus musculus. 197 samples. Type: Other; Expression profiling by high throughput sequencing.
Isolation and genome-wide characterization of cellular DNA:RNA triplex structures I
GEO Series GSE120845. Homo sapiens. 8 samples. Type: Other.
Adaptive Structural Variants Contributing to Human Brain Development Revealed by 1,026 Rhesus Macaque Genomes
GEO Series GSE221928. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Multiplex generation and single cell analysis of structural variants in mammalian genomes [IVT-seq]
GEO Series GSE282633. Homo sapiens; Mus musculus. 20 samples. Type: Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.