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Fig. 2. Neighbor-joining phylogenetic tree reconstructed from a in Isolation and characterization of four unrecorded wild yeasts from the soils of Republic of Korea in winter
Fig. 2. Neighbor-joining phylogenetic tree reconstructed from a comparative analysis of 26S rRNA gene sequences showing the relationships of strains NH20 and YP416 with closely related species. Bootstrap values (>50%) based on neighbor-joining methods are shown at the branch nodes. Bar, 0.01 substitutions per nucleotide position.
Fig. 3 in A report of 39 unrecorded bacterial species in Korea belonging to the classes Betaproteobacteria and Gammaproteobacteria isolated in 2018
Fig. 3. Neighbor-joining phylogenetic tree, based on 16S rRNA gene sequences, showing the relationship between the strains isolated in this study and their relatives of the class Betaproteobacteria. Numbers at the nodes are levels of bootstrap value (%) based on 1000 replicat- ed datasets; only values above 70% are shown. Escherichia coli ATCC 11775T (X80725) was used as an outgroup. Bar, 0.02 substitutions per nucleotide position.
Fig. 5 in A report of 39 unrecorded bacterial species in Korea belonging to the classes Betaproteobacteria and Gammaproteobacteria isolated in 2018
Fig. 5. Neighbor-joining phylogenetic tree, based on 16S rRNA gene sequences, showing the relationship between the strains isolated in this study and their relatives of the orders Lysobacterales and Oceanospirillales in the class Gammaproteobacteria. Numbers at the nodes are levels of bootstrap value (%) based on 1000 replicated datasets; only values above 70% are shown. Bacillus subtilis subsp. subtilis NCIB 3610T (ABQL01000001) was used as an outgroup. Bar, 0.02 substitutions per nucleotide position.
Fig. 5 in A report of 18 unrecorded prokaryotic species isolated from the feces of an Oriental stork (Ciconia boyciana), and from the intestinal tracts of a cobitid fish (Kichulchoia multifasciata) and a Korean splendid dace (Coreoleuciscus splendidus)
Fig. 5. Phylogenetic tree based on 16S rRNA gene sequence comparisons, showing the relationship between strain H23T21 and the notable type species from the family Sphingobacteriaceae. The tree was reconstructed using neighbor joining (NJ), maximum likelihood (ML), and maximum parsimony (MP) algorithms. Filled diamonds indicate corresponding branches present in the phylogenetic tree generated using the three different tree construction methods. Numbers at the nodes represent bootstrap values of more than 70% are shown, based on 1000 replicates (NJ/MP/ML). Filobacterium rodentium SMR-CT (LC055729) was used as the outgroup. The bar indicates 0.05 accumulated substitutions per nucleotide.
Fig. 1 in A report of 39 unrecorded bacterial species in Korea belonging to the classes Betaproteobacteria and Gammaproteobacteria isolated in 2018
Fig. 1. Transmission electron micrographs of cells of the species belonging to the Betaproteobacteria isolated in this study. Strains: 1. MMS18-G 109; 2. MS25; 3. LPB0241; 4. HMF7542; 5. MMS18-M_91; 6. HMF7541; 7. HMF7531; 8. BO221; 9. dNF-3; 10. GA051; 11. HMF7122; 12. CAU 1510; 13. 17G39-22; 14. 18H6F1.
Fig. 2 in A report of 39 unrecorded bacterial species in Korea belonging to the classes Betaproteobacteria and Gammaproteobacteria isolated in 2018
Fig. 2. Transmission electron micrographs or scanning electron micrographs of cells of the species belonging to the Gammaproteobacteria isolated in this study. Strains: 1. 18N2A1; 2. 18H4A15; 3. HMF9091; 4. KYW1522; 5. CAU 1507; 6. SC100; 7. dN13-1; 8. 18N3A9; 9. 18S2E14; 10. BO208; 11. BO171; 12. HMF9224; 13. H-2; 14. 18S2F3; 15. BT5; 16. KYW1450; 17. HMF9105; 18. SC76; 19. LPB0223; 20. BT57; 21. Hyper-1; 22. BO274; 23. LPB0247; 24. 18H1S12; 25. LPB0246.
Fig. 3 in A report of 35 unrecorded bacterial species isolated from sediment in Korea
Fig. 3. Transmission electron micrographs of cells of the strains isolated in this study. Strains: 1, UMS-18; 2, SS1-64; 3, UTS6-49; 4, SS1- 41; 5, AS4-17; 6, UTS5-20; 7, GS1-31; 8, SS2-77; 9, ES2-36; 10, SS5-09; 11, UTS5-15; 12, UTS2-06; 13, HS1-69; 14, UTS5-52; 15, SJS1-74; 16, UTS2-20; 17, LS1-46; 18, SJS1-42-1; 19, CCS-46; 20, LS1-26; 21, LS1-27; 22, SS1-12; 23, SS1-02; 24, ES1-24; 25, UMS- 61; 26, 05SS-25; 27, HS1-70; 28, SS12-22; 29, HS1-68; 30, SJS3-28; 31, LS2-11; 32, SS7-26; 33, SS7-18; 34, SS12-55; 35, GS1-01.
Fig. 2 in A report of 35 unrecorded bacterial species isolated from sediment in Korea
Fig. 2. Neighbor-joining phylogenetic tree based on 16S rRNA gene sequences showing the relationship between the strains isolated in this study and their relatives of the phyla Acidobacteria, Bacteroidetes and Proteobacteria. Bootstrap values (expressed as percentages of 1,000 replication) over 50% are shown at node for neighbor-joining, maximum parsimony, maximum likelihood, respectively. Filled circles indicate that the corresponding nodes were also recovered in the trees generated with the maximum likelihood and maximum parsimony algorithms, while open circles indicate that the corresponding nodes were also recovered in the tree generated with one of these algorithms. Bar, 0.05 substitutions per nucleotide position.
Fig. 1 in A report of 35 unrecorded bacterial species isolated from sediment in Korea
Fig. 1. Neighbor-joining phylogenetic tree based on 16S rRNA gene sequences showing the relationship between the strains isolated in this study and their relatives of the phyla Actinobacteria, Firmicutes and Verrucomicrobia. Bootstrap values (expressed as percentages of 1,000 replication) over 50% are shown at node for neighbor-joining, maximum parsimony, maximum likelihood, respectively. Filled circles indicate that the corresponding nodes were also recovered in the trees generated with the maximum likelihood and maximum parsimony algorithms, while open circles indicate that the corresponding nodes were also recovered in the tree generated with one of these algorithms. Bar, 0.05 substitutions per nucleotide position.
Fig. 11 in Twelve unrecorded UV-resistant bacterial species isolated in 2020
Fig. 11. UV resistance graph of the strains isolated in this study. Survival rates of D. radiodurans R1T (), strains () and E. coli K12 () ■ ● ◆ are also shown. Strains: a, BT578; b, BT579; c, BT623; d, BT581; e, BT582; f, BT474; g, BT580; h, BT558; i, BT455; j, BT653; k, BT183; l, BT649.
Fig. 10 in Twelve unrecorded UV-resistant bacterial species isolated in 2020
Fig. 10. Neighbor-joining phylogenetic tree based on 16S rRNA gene sequences shows the relationship between the strains isolated in this study and their relatives of the genus Peribacillus BT649. Bootstrap values (>70%) are shown above nodes. Bar: 0.01 substitutions per nucleotide position.
Fig. 4 in Twelve unrecorded UV-resistant bacterial species isolated in 2020
Fig. 4. Neighbor-joining phylogenetic tree based on 16S rRNA gene sequences shows the relationship between the strains isolated in this study and their relatives of the genus Nocardia BT474. Bootstrap values (>70%) are shown above nodes. Bar: 0.01 substitutions per nucleotide position.
Fig. 7 in Twelve unrecorded UV-resistant bacterial species isolated in 2020
Fig. 7. Neighbor-joining phylogenetic tree based on 16S rRNA gene sequences shows the relationship between the strains isolated in this study and their relatives of the genus Methylobacterium BT455. Bootstrap values (>70%) are shown above nodes. Bar: 0.01 substitutions per nucleotide position.
Fig. 6 in Twelve unrecorded UV-resistant bacterial species isolated in 2020
Fig. 6. Neighbor-joining phylogenetic tree based on 16S rRNA gene sequences shows the relationship between the strains isolated in this study and their relatives of the genus Microbacterium BT558. Bootstrap values (>70%) are shown above nodes. Bar: 0.01 substitutions per nucleotide position.
Fig. 5 in Twelve unrecorded UV-resistant bacterial species isolated in 2020
Fig. 5. Neighbor-joining phylogenetic tree based on 16S rRNA gene sequences shows the relationship between the strains isolated in this study and their relatives of the genus Cellulomonas BT580. Bootstrap values (>70%) are shown above nodes. Bar: 0.01 substitutions per nucleotide position.
Fig. 8 in Twelve unrecorded UV-resistant bacterial species isolated in 2020
Fig. 8. Neighbor-joining phylogenetic tree based on 16S rRNA gene sequences shows the relationship between the strains isolated in this study and their relatives of the genus Sphingomonas BT653. Bootstrap values (>70%) are shown above nodes. Bar: 0.01 substitutions per nucleotide position.
Fig. 1 in Twelve unrecorded UV-resistant bacterial species isolated in 2020
Fig. 1. Transmission electron micrographs of the strains isolated in this study. Strains: a, BT578; b, BT579; c, BT623; d, BT581; e, BT582; f, BT474; g, BT580; h, BT558; i, BT455; j, BT653; k, BT183; l, BT649.
FIGURE 2 in Massif Speciation Events in New Caledonian Lizards: Diversification in the Genus Marmorosphax (Scincidae) Tracks Isolation on the Island's Ultramafic Surfaces
FIGURE 2. Persistent high elevation cloud formation on northwest Massif Katépahié (adjacent to the Massif de Koniambo) during the dry season.
FIGURE 5 in Massif Speciation Events in New Caledonian Lizards: Diversification in the Genus Marmorosphax (Scincidae) Tracks Isolation on the Island's Ultramafic Surfaces
FIGURE 5. Phylogenetic relationships amongst the species and populations of Marmorosphax. Likelihood topology with UFboot and BPP Bayesian posterior probabilities shown respectively. UFboot equal to 100 and BPP equal to 1.0 are represented at nodes with black circles. The numbers in squares represent the four major groups of Marmorosphax and numbers present in circles represent groups for pairwise comparisons. – indicate nodes not recovered by both phylogenetic analyses.
Fig. 7 in The biology of an isolated Mashona mole-rat population from southern Malawi, with implications for the diversity and biogeography of the genus Fukomys
Fig. 7 Violin plots showing the distribution of growth parameters (A, K, I, and maximum growth rate) calculated separately for 73 individuals of Fukomys darlingi from the Nsanje population
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
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DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.