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FIG. 2 in A New Green Salamander in the Southern Appalachians: Evolutionary History of Aneides aeneus and Implications for Management and Conservation with the Description of a Cryptic Microendemic Species
FIG. 2. Mitochondrial phylogenetic lineages within Aneides aeneus (Castaneides). (A) Localities of samples used in the mitochondrial phylogenetic analysis. The type locality (Nickajack Cave) is in Tennessee, at the border with Alabama; specimens from this vicinity are nested in the southern Appalachian clade. Red stars are locations used in the nuclear phylogenetic reconstruction. (B) Bayesian consensus tree of Cytochrome b and 12S rDNA sequences as produced by BEAST 2. Node labels represent posterior probabilities for the four main lineage splits within A. aeneus (Castaneides). Outgroup contains one voucher specimen each of A. hardii and A. flavipunctatus, obtained from GenBank. Numbered stars indicate clades identified by PTP to comprise unique species across the majority of the posterior distribution. Support values for clades are as follows: 1) 59%, 2) 91%, 3) 71%, 4) 93%. See Data Accessibility for tree file.
FIG. 5 in A New Green Salamander in the Southern Appalachians: Evolutionary History of Aneides aeneus and Implications for Management and Conservation with the Description of a Cryptic Microendemic Species
FIG. 5. Results of Principal Components Analysis (PCA) and Linear Discriminant Analysis (LDA) using 14 morphological characters. For both analyses, data were normalized where possible and necessary (longest toe, 5th toe log-transformed; adpressed limbs converted to absolute value and then log-transformed). (A) PCA with points and normal data ellipses colored by species. (B) Density plot of prediction accuracy by LDA across 1,000 permutations of samples for the training and prediction sets.
Figure 1 in The conservation paradox of an introduced population of a threatened species: spadefoot toads in the coastal dunes of the Netherlands
Figure 1. Sampling sites of the common spadefoot toad (Pelobates fuscus). The main map shows localities sampled outside and the inset localities sampled inside the Netherlands (see main text for details). A rough outline of the natural distribution range in the Netherlands is shaded grey. Localities that contain haplotypes found in the Netherlands are colour coded; otherwise they are left grey (FUS stands for P. fuscus). Sampling details are in supplementary table S1.
Figure 4 in The introduction of three cryptic tree frog species in the Dutch coastal dunes challenges conservation paradigms
Figure 4. Majority rule consensus phylogenetic tree resulting from Bayesian inference for Hyla orientalis haplotypes. Grey branches indicate the backbone phylogeny with representatives for each Western Palearctic Hyla species; the relatively distinct H. meridionalis and H. carthaginiensis were used as outgroup and are not shown. The pink haplotype is newly identified in the Netherlands; black haplotypes have not been reported in the Netherlands. Haplotype labels correspond to supplementary table S1.
Figure 2 in The introduction of three cryptic tree frog species in the Dutch coastal dunes challenges conservation paradigms
Figure 2. Majority rule consensus tree resulting from Bayesian inference to allocate new Hyla haplotypes to species. Grey branches indicate the backbone phylogeny with representatives for each Western Palearctic Hyla species; the relatively distinct H. meridionalis and H. carthaginiensis were used as outgroup and are not shown. New haplotypes are coloured blue (H. arborea) or pink (H. orientalis). Haplotype labels correspond to supplementary table S1.
Figure 1 in The introduction of three cryptic tree frog species in the Dutch coastal dunes challenges conservation paradigms
Figure 1. Map of the Netherlands showing sampled localities for Hyla tree frogs. A rough outline of the natural tree frog distribution range is shaded grey. Pies are sampled localities. Pie slices are coloured according to haplotype and pie sizes reflect sample sizes. Previously identified haplotypes are labelled 'old' and those newly identified in this study 'new'. The five populations introduced in the coastal dunes are labelled with the (approximate) date of appearance. Sampling details are in supplementary table S1.
Figure 3 in The conservation paradox of an introduced population of a threatened species: spadefoot toads in the coastal dunes of the Netherlands
Figure 3. Haplotype network for the common spadefoot toad (Pelobates fuscus) Haplotypes relevant to the current study are colour coded; the remainder is left grey (details in supplementary table S1). The prefix 'FUS' is not shown for the haplotype codes.
Figure 3 in The introduction of three cryptic tree frog species in the Dutch coastal dunes challenges conservation paradigms
Figure 3. Majority rule consensus phylogenetic tree resulting from Bayesian inference for Hyla arborea haplotypes. Grey branches indicate the backbone phylogeny with representatives for each Western Palearctic Hyla species; the relatively distinct H. meridionalis and H. carthaginiensis were used as outgroup and are not shown. Blue haplotypes are newly identified and orange haplotypes were previously reported haplotypes in the Netherlands; black haplotypes have not been reported in the Netherlands. Haplotype labels correspond to supplementary table S1.
Figure 2 in The conservation paradox of an introduced population of a threatened species: spadefoot toads in the coastal dunes of the Netherlands
Figure 2. Phylogenetic tree for common spadefoot toad (Pelobates fuscus) and Pallas's spadefoot toad (P. vespertinus). Haplotypes relevant to the current study are colour coded; the remainder is left grey (details in Table S1). Haplotype abbreviations are: FUS = P. fuscus, VES = P. vespertinus, BAL = P. balcanicus, SYR = P. syriacus, CUL = P. cultripes, and VAR = P. varaldii.
FIGURE 1 in Patterns Of Geographic Distribution And Conservation Of The Open-Habitat Avifauna Of Southeastern Brazilian Mountaintops (Campos Rupestres And Campos De Altitude)
FIGURE 1: Map showing mountaintop regions of campos rupestres and campos de altitude considered in this review. Localities codes are presented in Table 1.
EduLifeDesks Archive: Hungarian Ornithological and Nature Conservation Society (508) DwCA
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EduLifeDesks Archive: CIEE Tropical Ecology and Conservation Program Spring 2013 (655) DwCA
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Comparative genomics of fungi in Nectriaceae reveals their environmental adaptation and conservation strategies
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FIGURE 1 in Taxonomy, conservation, geographic and potential distribution of Macrotorus Perkins (Mollinedioideae, Monimiaceae), and a key to the Neotropical genera of Monimiaceae
FIGURE 1. Illustrations of Macrotorus utriculatus. A. Stem with drupelets (Demuner 2828, RB). B. Staminate flower in longitudinal section. C. Peltate stamen. D. Horseshoe stamen shape (Vervloet 477, RB). E. Pistillate flower (Magnago 1150, RB). F–G. Drupelet shapes (Demuner 2436, 2828 RB). Drawn by V. Pequeno.
FIGURE 4 in Taxonomy, conservation, geographic and potential distribution of Macrotorus Perkins (Mollinedioideae, Monimiaceae), and a key to the Neotropical genera of Monimiaceae
FIGURE 4. Specimen selected as isolectotype of Macrotorus utriculatus. Available at: http://coldb.mnhn.fr/catalognumber/mnhn/p/ p00080306. Copyright Muséum National d'Histoire Naturelle.
FIGURE 7 in Taxonomy, conservation, geographic and potential distribution of Macrotorus Perkins (Mollinedioideae, Monimiaceae), and a key to the Neotropical genera of Monimiaceae
FIGURE 7. Loadings (axes 1, 2 and 3, from left to right, up to down) of the environmental variables used, based on the Macrotorus utriculatus occurrence points. Environmental variables selected: PET= Annual Average of Potential Evapo-Transpiration; PS= Precipitation Seasonality; ALT= Elevation; PWQ= Precipitation of Wettest Quarter; TS= Temperature Seasonality; PDM= Precipitation of Driest Month.
FIGURE 3 in Taxonomy, conservation, geographic and potential distribution of Macrotorus Perkins (Mollinedioideae, Monimiaceae), and a key to the Neotropical genera of Monimiaceae
FIGURE 3. Specimen selected as lectotype (pro parte, staminate only) of Macrotorus utriculatus. Copyright Botanic Garden Maise.
FIGURE 2 in Taxonomy, conservation, geographic and potential distribution of Macrotorus Perkins (Mollinedioideae, Monimiaceae), and a key to the Neotropical genera of Monimiaceae
FIGURE 2. Photographs of Macrotorus utriculatus in the field (Ribeiro 1131). A. Trunk. B. Staminate flowers. C. Anthetic pistillate flowers showing the calyptra. D. Mature drupelets. Photographs by M. Ribeiro.
FIGURE 6 in Taxonomy, conservation, geographic and potential distribution of Macrotorus Perkins (Mollinedioideae, Monimiaceae), and a key to the Neotropical genera of Monimiaceae
FIGURE 6. PCA scores of Macrotorus utriculatus occurrence points. ES = Espírito Santo, RJ = Rio de Janeiro and SP = São Paulo localities, numbered from north to south. Environmental variables selected: PET= Annual Average of Potential Evapo-Transpiration; PS= Precipitation Seasonality; ALT= Elevation; PWQ= Precipitation of Wettest Quarter; TS= Temperature Seasonality; PDM= Precipitation of Driest Month.
FIGURE 5 in Taxonomy, conservation, geographic and potential distribution of Macrotorus Perkins (Mollinedioideae, Monimiaceae), and a key to the Neotropical genera of Monimiaceae
FIGURE 5. Predicted distribution model for Macrotorus utriculatus generated through MaxEnt. Warm colors represent higher environmental suitability, and cold colors represent lower suitability for the species. Black dots represent the known distribution of the species. Brazilian states: PE = Pernambuco, AL = Alagoas, SE = Sergipe, BA = Bahia, GO = Goiás, ES = Espírito Santo, MG = Minas Gerais, RJ = Rio de Janeiro and SP = São Paulo.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.