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3,684
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ShareScore release 0.9.0
Dataset results
3,684 results for “extract”
RNA-seq-based transcriptome profiling of fruit extract of Brucea javanica (FEBJ) and cynaroside
GEO Series GSE266353. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Profiling of small RNA populations in rice total extract and purified AGO1 complexes
GEO Series GSE18250. Oryza sativa. 4 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Effects on gene expression of a medicinal extract from Agaricus blazei in patients with hepatitis C infection
GEO Series GSE3983. Homo sapiens. 8 samples. Type: Expression profiling by array.
Extraction of high-quality epidermal RNA after NH4SCN induced dermo-epidermal separation of 4 mm human skin biopsies
GEO Series GSE15101. Homo sapiens. 37 samples. Type: Expression profiling by array.
Hepatocellular Carcinomas Arising Either Spontaneously or due to Chronic Exposure to Ginkgo biloba Extract (GBE) in B6C3F1/N Mice
GEO Series GSE132578. Mus musculus. 33 samples. Type: Expression profiling by array; Methylation profiling by genome tiling array.
RNA-seq analysis of hepatocellular carcinoma (HCC), in which HBV-KMT2B integration was identified. The tumor region and nontumorous region were extracted from the HCC surgical specimen.
GEO Series GSE218317. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
RNA-seq data from MCF-7 cells (breast cancer model) treated with soy extracts
GEO Series GSE56066. Homo sapiens. 30 samples. Type: Expression profiling by high throughput sequencing.
Effect of Rosa roxburghii fruit extracts to gene expression of mesenchymal stem cells
GEO Series GSE261987. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide promoter DNA Methylation Profiling of Hepatocellular Carcinomas Arising Either Spontaneously or due to Chronic Exposure to Ginkgo biloba Extract (GBE) in B6C3F1/N Mice [Methylation]
GEO Series GSE132577. Mus musculus. 15 samples. Type: Methylation profiling by genome tiling array.
P. syringae pv. phaseolicola NPS3121 responses to bean pod extract
GEO Series GSE14625. Pseudomonas savastanoi pv. phaseolicola. 6 samples. Type: Expression profiling by array.
Effect of Dermatophagoides farinae extract and calcitriol on canine primary sublingual epithelial cells
GEO Series GSE148592. Canis lupus familiaris. 20 samples. Type: Expression profiling by high throughput sequencing.
CASSINI S INMS LEVEL 1A EXTRACTED DATA V1.0
The Cassini Ion and Neutral Mass Spectrometer (INMS) level 1A data set includes all mass samples for the entire Cassini mission. The data set includes mass spectra data from the instrument checkout periods, SOI and the entire Saturn tour. The data is organized as a spread sheet with one row for each sample period. Each column in the spread sheet contains the ancillary data and the output of the counters.
Advancing the automation of plant nucleic acid extraction for rapid diagnosis of plant diseases in space
Human space exploration missions will continue the development of sustainable plant cultivation in what are obviously novel habitat settings. Effective pathology mitigation strategies are needed to cope with plant disease outbreaks in any space-based plant growth system. However, few technologies currently exist for space-based diagnosis of plant pathogens. Therefore, we developed a method of extracting plant nucleic acid that will facilitate the rapid diagnosis of plant diseases for future spaceflight applications. The microHomogenizer from Claremont BioSolutions, originally designed for bacterial and animal tissue samples, was evaluated for plant–microbial nucleic acid extractions. The microHomogenizer is an appealing device in that it provides automation and containment capabilities that would be required in spaceflight applications. Two different plant pathosystems were used to assess the versatility of the extraction process. Tomato and lettuce plants were respectively inoculated with a fungal plant pathogen, an oomycete pathogen, and a plant viral pathogen. The microHomogenizer, along with the developed protocols, proved to be an effective mechanism for producing DNA from two pathosystems, in that PCR and sequencing of the resulting samples demonstrated clear DNA-based diagnoses. Thus, this investigation advances the efforts to automate nucleic acid extraction for future plant disease diagnosis in space.
PEP PACS Extractions Using MIPS 24 micron Priors
The PACS Evolutionary Probe (PEP, Lutz et al. 2011) is a Herschel guaranteed time deep extragalactic survey (KPGT_dlutz_1) targeting six among the most popular "blank fields", ten lensing clusters of galaxies, and two z ~1 clusters at wavelengths of 100, and 160 microns. PEP includes SPIRE observations of the two z ~1 clusters at wavelengths of 250, 350, and 500 microns. SPIRE coverage of all other fields is available from the HerMES survey (Oliver et al. 2010). In addition, deep SPIRE GOODS-N data are provided by the GOODS-Herschel program (Elbaz et al. 2011).In addition to the blind catalogs extracted with Starfinder, PEP also provides a catalog obtained using 24 micron position priors and PSF-fitting. The catalogs of priors used for each blank field are listed in Table 16 of the documentation, and are mostly based on an extraction driven by IRAC source positions. Priors extraction of PACS fluxes is obtained following the method described in Magnelli et al. (2009). Users should keep in mind that the error estimate does not take into account confusion noise. PEP recommends to use any flux below 0.6 mJy in the green band and below 2.0 mJy in the red band with care.
Anti-fatigure properties of Sasa quelpaertensis leaf extracts in mice
GEO Series GSE113759. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Identification of transcriptome changes associated with toxic effects of methanolic coal dust extract on fish early life stage by RNASeq
GEO Series GSE128900. Danio rerio. 9 samples. Type: Expression profiling by high throughput sequencing.
Modifying DNA extraction protocol alters human brain copy number estimation
GEO Series GSE71470. Homo sapiens. 40 samples. Type: Genome variation profiling by array; SNP genotyping by SNP array.
Foodomics study on the anti-proliferative activity mechanisms on HT-29 colon cancer cells in response to golden berry (Physalis peruviana L.) calyx extracts
GEO Series GSE132855. Homo sapiens. 3 samples. Type: Expression profiling by array.
Effects of aged garlic extract (AGE) and FruArg on lipopolysaccharide-induced genetic response in microglial cells using gene expression profiling
GEO Series GSE87531. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Paeonia lactiflora extract suppresses cisplatin-induced muscle wasting via donwnregulations of muscle-specific E3 ubiquitin ligases
GEO Series GSE147613. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.