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520
datasets available to search
ShareScore release 0.9.0
Dataset results
520 results for “Host interactions”
Characterization of antibiotic resistance and host-microbiome interactions in the human upper respiratory tract during influenza infection [human host RNA-seq]
GEO Series GSE114588. Homo sapiens. 56 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome data of interacting Salmonella Typhimurium and human host cells
GEO Series GSE61730. Salmonella enterica; Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Spaceflight analogue culture enhances the host-pathogen interaction between Salmonella and a 3-D biomimetic intestinal co-culture model
GEO Series GSE146347. Salmonella enterica subsp. enterica serovar Typhimurium; Homo sapiens. 72 samples. Type: Expression profiling by high throughput sequencing.
Analysis of 3D interactions identifies candidate host genes that transposable elements potentially regulate (4C-Seq)
GEO Series GSE122974. Mus musculus. 19 samples. Type: Other.
Host-pathogen genetic interactions underlie tuberculosis susceptibility in genetically diverse mice
GEO Series GSE164156. Mycobacterium tuberculosis H37Rv. 123 samples. Type: Other.
Malaria Host Pathogen Interaction Center Experiment 13: Gene and exon transcript abundances of uninfected Macaca mulatta treated with pyrimethamine over 7 time points in a 100 day study
GEO Series GSE58340. Macaca mulatta. 70 samples. Type: Expression profiling by high throughput sequencing.
Multi-omics analysis to study hepatitis B virus-host interaction
GEO Series GSE135860. Homo sapiens. 12 samples. Type: Other; Expression profiling by high throughput sequencing.
Epstein-Barr Virus episome physically interacts with active regions of the host genome in lymphoblastoid cells
GEO Series GSE154052. Homo sapiens. 2 samples. Type: Other.
Cells released from Staphylococcus epidermidis biofilms interact differently from biofilm or planktonic cells with murine host immune system.
GEO Series GSE60992. Mus musculus. 10 samples. Type: Expression profiling by array.
MicroRNAs from saliva of anopheline mosquitoes mimic human endogenous miRNAs and may contribute to vector-host-pathogen interactions
GEO Series GSE120658. Anopheles coluzzii. 14 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Transcriptomic analysis reveals candidate genes regulating infection-related developments and host interactions of Colletotrichum fructicola
GEO Series GSE103878. Colletotrichum fructicola. 12 samples. Type: Expression profiling by high throughput sequencing.
Host-microbiota interaction is regulated by autonomous skin-intrinsic germinal centers [BCR]
GEO Series GSE279095. Mus musculus. 26 samples. Type: Other.
Dual RNA-Sequencing of Vitis vinifera During Lasiodiplodia theobromae Infection Unveils Host-Pathogen Interactions
GEO Series GSE129109. Lasiodiplodia theobromae; Vitis vinifera. 24 samples. Type: Expression profiling by high throughput sequencing.
The microbiome buffers tadpole hosts from heat stress: a hologenomic approach to understand host-microbe interactions under warming
GEO Series GSE208645. Lithobates clamitans. 20 samples. Type: Expression profiling by high throughput sequencing.
Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k)
GEO Series GSE268018. Plasmodium berghei ANKA; Mus musculus. 38 samples. Type: Expression profiling by high throughput sequencing.
A fungal transcription regulator of vacuolar functions modulates Candida albicans interactions with host epithelial cells [RNA-seq]
GEO Series GSE181653. Candida albicans. 6 samples. Type: Expression profiling by high throughput sequencing.
Transcriptional responses of Rhizopus microsporus host and non-host isolates to physical interaction with Burkholderia endobacteria of the host
GEO Series GSE89305. Rhizopus microsporus. 12 samples. Type: Expression profiling by high throughput sequencing.
Expression of the host and pathogen genes during sugarcane - S. scitamineum interaction
GEO Series GSE140801. Saccharum sp. complex hybrid. 24 samples. Type: Expression profiling by array.
Combined transcriptional profiling during systemic candidiasis reveals organ-specific host-pathogen interactions [mouse tissues 12,24,72 h]
GEO Series GSE83680. Mus musculus. 54 samples. Type: Expression profiling by array.
MYC regulates ribosome biogenesis and mitochondrial gene expression programs through its interaction with Host Cell Factor-1
GEO Series GSE152385. Homo sapiens. 61 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.