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358
datasets available to search
ShareScore release 0.9.0
Dataset results
358 results for “fine-scale”
Fine-Scale Mapping and Sequencing of Structural Variation from Eight Human Genomes
GEO Series GSE10008. Homo sapiens. 38 samples. Type: Genome variation profiling by genome tiling array.
Hi-TrAC reveals fine-scale chromatin structures organized by transcription factors
GEO Series GSE180175. Mus musculus; Homo sapiens. 136 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Analysis of plant LTR-retrotransposons at the fine-scale family level reveals individual molecular patterns
GEO Series GSE35143. Saccharum officinarum. 1 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Fine-scale contemporary recombination variation and its fitness consequences in adaptively diverging stickleback fish
GEO Series GSE254561. Gasterosteus aculeatus. 22 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Fine-scale contemporary recombination variation and its fitness consequences in adaptively diverging stickleback fish [ChIP-Seq]
GEO Series GSE254557. Gasterosteus aculeatus. 10 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Fine-scale chromatin interaction maps reveal the cis-regulatory landscape of human lincRNA genes
GEO Series GSE56869. Homo sapiens. 8 samples. Type: Other.
Data from: Fine-scale genetic analysis of species-specific female preference in Drosophila simulans
Behavioral differences are thought to be the first components to contribute to species isolation, yet the precise genetic basis of behavioral isolation remains poorly understood. Here, we used a combination of behavior assays and genetic mapping to provide the first refined map locating candidate genes for interspecific female preference isolating Drosophila simulans from D. melanogaster. First, we tested whether two genes identified as affecting D. melanogaster female intraspecific mate choice also affect interspecific mate choice; neither of these genes was found to contribute to species-specific female preference. Next, we used deficiency mapping to locate genes on the right arm of the third chromosome for species-specific female preference and identified five small significant regions that contain candidate genes contributing to behavioral isolation. All five regions were located in areas that would have low interspecific recombination, which mirrors the results of other behavioral isolation studies that used quantitative trait locus (QTL) mapping, but without the potential concern of bias towards regions of low recombination that QTL mapping may have. Since this model system may be refined to the individual gene level using the same methodology, this initial map we provide may potentially serve as a ready template for the identification and characterization of the first behavioral isolation genes.
R unmarked dataframe: Fine-scale forest structure, not management regime, drives occupancy of a declining songbird, the Olive-sided Flycatcher, in the core of its range
<p>Encounter history, site covariates, and observation covariates formatted as an unmarkedFrameOccu object for use in program R with the package unmarked to replicate the analyses conducted by Hack et al. in 'Fine-scale forest structure, not management regime, drives occupancy of a declining songbird, the Olive-sided Flycatcher, in the core of its range.'</p>
Figure 2 from: Piry S, Berthier K, Streiff R, Cros-Arteil S, Foucart A, Tatin L, Bröder L, Hochkirch A, Chapuis M-P (2018) Fine-scale interactions between habitat quality and genetic variation suggest an impact of grazing on the critically endangered Crau Plain grasshopper (Pamphagidae: Prionotropis rhodanica). Journal of Orthoptera Research 27(1): 61-73. https://doi.org/10.3897/jor.27.15036
Figure 2 Adult of Prionotropis rhodanica.
Data from: Fine-scale genetic analysis of species-specific female preference in Drosophila simulans
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Data from: Fine-scale genetic structure and flowering output of the seagrass Enhalus acoroides undergoing disturbance
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Data from: Rapid and inexpensive whole-genome genotyping-by-sequencing for crossover localization and fine-scale genetic mapping.
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Fine-Scale Mapping and Sequencing of Structural Variation from Eight Human Genomes
GEO Series GSE10037. Homo sapiens. 8 samples. Type: Genome variation profiling by genome tiling array.
Fine-scale contemporary recombination variation and its fitness consequences in adaptively diverging stickleback fish [ATAC-Seq]
GEO Series GSE254559. Gasterosteus aculeatus. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Deciphering histone mark-specific fine-scale chromatin organization at high resolution with Micro-C-ChIP
GEO Series GSE246346. Mus musculus; Homo sapiens. 11 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
Fine-scale mapping of copy-number alterations with massively parallel sequencing
GEO Series GSE12019. Homo sapiens. 225 samples. Type: Genome variation profiling by SNP array.
Fine-scale tree spatial patterns are shaped by dispersal limitation which correlates to functional traits in a natural temperate forest - Raw SPPA data
<p>Raw data allowing the reproduction of the spatial point pattern analysis detailed in Beyns, R. et al. (2021) Fine-scale tree spatial patterns are shaped by dispersal limitation which correlates to functional traits in a natural temperate forest. <em>Journal of Vegetation Science</em>.</p>
Fine-scale species occurrence data
<p>Surveys of individual vascular plant species occurrence and cover in quadrats of 1x1 m on sub-Antarctic Marion Island.</p>
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.