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409
datasets available to search
ShareScore release 0.9.0
Dataset results
409 results for “genome organization”
Heterochromatic 3D genome organization is directed by HP1a and H3K9-dependent and independent mechanisms.
GEO Series GSE234277. Drosophila melanogaster. 72 samples. Type: Other; Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Tracking Epigenetic Modification-Mediated Genome Organization
GEO Series GSE137469. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Three non-invasive protein biomarkers for solid-organ transplant rejection found through integrative genomics
GEO Series GSE14328. Homo sapiens. 36 samples. Type: Expression profiling by array.
SMCHD1 controls the structure and accessibility of heterochromatin and functions as an organizer of genome compartments (HiC)
GEO Series GSE251749. Homo sapiens. 4 samples. Type: Other.
Anti-cancer drugs curaxins target the 3D genome organization
GEO Series GSE122463. Homo sapiens. 12 samples. Type: Other; Genome binding/occupancy profiling by high throughput sequencing.
The 3D genomics of lampbrush chromosomes highlights the role of active transcription in chromatin organization [scHi-C]
GEO Series GSE288409. Gallus gallus. 25 samples. Type: Other.
3D genome organization in the epithelial-mesenchymal transition spectrum
GEO Series GSE201919. Homo sapiens. 37 samples. Type: Other.
Elementary 3D organization of active and silenced E. coli genome
GEO Series GSE272161. Escherichia coli. 62 samples. Type: Other; Expression profiling by high throughput sequencing.
Anti-cancer drugs curaxins target the 3D genome organization [HiC]
GEO Series GSE117582. Homo sapiens. 4 samples. Type: Other.
Chromatin States and their diverse protein occupancy drive genome organization in S. cerevisiae through heterogeneous Brownian motion
GEO Series GSE105075. Saccharomyces cerevisiae. 4 samples. Type: Other.
PfSET2 is involved in genome organization of var gene family in Plasmodium falciparum [RNAseq]
GEO Series GSE169027. Plasmodium falciparum 3D7. 4 samples. Type: Expression profiling by high throughput sequencing.
Early events in transcription and genome organization after STAG2 reconstitution in human cancer cells [Hi-C]
GEO Series GSE318550. Homo sapiens. 8 samples. Type: Other.
High-precision mapping of nuclear pore-chromatin interactions reveals new principles of genome organization at the nuclear envelope
GEO Series GSE176106. Mus musculus; Homo sapiens. 29 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
3D genome organization by CTCF prevents exTreg differentiation to control autoimmunity peripheral tolerance and immunotherapy outcomes [bulkRNAseq_ATACseq_CUT_Tag]
GEO Series GSE274542. Mus musculus. 41 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Adaptive Evolution of a Minimal Organism with a Synthetic Genome
GEO Series GSE205017. synthetic bacterium JCVI-Syn3A. 13 samples. Type: Expression profiling by high throughput sequencing.
In vivo organization of bacterial transcription initiation complexes at a genome-scale [ChIP-exo]
GEO Series GSE54403. Escherichia coli str. K-12 substr. MG1655. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
In vivo organization of bacterial transcription initiation complexes at a genome-scale [ChIP-seq]
GEO Series GSE54404. Escherichia coli str. K-12 substr. MG1655. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genomic instability is an early event driving chromatin organization and “escape” from oncogene-induced senescence
GEO Series GSE163371. Homo sapiens. 4 samples. Type: Other; Genome binding/occupancy profiling by high throughput sequencing.
The Myc-Associated Zinc Finger Protein (MAZ) Works Both Independently and Together with CTCF to Control Cohesin Positioning and Genome Organization
GEO Series GSE143937. Homo sapiens. 24 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
Spatial genome re-organization between fetal and adult hematopoietic stem cells (ChIP-Seq)
GEO Series GSE119200. Mus musculus. 20 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.