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537
datasets available to search
ShareScore release 0.9.0
Dataset results
537 results for “genome structure”
Linking DNA Methyltransferases (DNMTs) to Epigenetic Marks and Nucleosome Structure Genome-Wide in Human Tumor Cells
GEO Series GSE38938. Homo sapiens. 28 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by array; Methylation profiling by high throughput sequencing.
Chromatin and Sequence Features that Define the Fine and Gross Structure of Genomics Methylation Patterns
GEO Series GSE21242. Homo sapiens; Mus musculus. 8 samples. Type: Methylation profiling by high throughput sequencing.
Meiotic cohesin RAD21L shapes 3D genome structure and transcription in the male germline [scRNA-seq]
GEO Series GSE297601. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Droplet-based high-throughput 3D genome structure mapping of single cells with simultaneous transcriptomics (b3-mouse-brain)
GEO Series GSE285811. Mus musculus. 1 samples. Type: Other.
Parallel evolution of transcriptome structure during genome reorganization
GEO Series GSE26782. Methanococcus maripaludis S2; Pyrococcus furiosus DSM 3638; Saccharolobus solfataricus P2. 46 samples. Type: Expression profiling by genome tiling array.
High-resolution 3D genome structures via single-cell Micro-C uncovers cohesin-mediated enhancer-promoter loops [1000U]
GEO Series GSE278191. Homo sapiens. 96 samples. Type: Other.
Triplexes are Dynamic DNA Secondary Structures Formed in vivo and Linked to Genome Instability [pacBio WGS]
GEO Series GSE204806. Homo sapiens. 4 samples. Type: Other.
Depletion of RUNX1/ETO in t(8;21) AML cells leads to genome-wide changes in chromatin structure and transcription factor binding (Illumina expression)
GEO Series GSE34594. Homo sapiens. 10 samples. Type: Expression profiling by array.
Somatic mutation distributions in cancer genomes vary with three-dimensional chromatin structure
GEO Series GSE120166. Homo sapiens. 4 samples. Type: Other.
Genome structure in single nucleoli by sequencing of laser capture nucleolar microdissection (scRNA-Seq)
GEO Series GSE293968. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide identifying of G-quadruplex structures directly by whole-genome resequencing
GEO Series GSE159307. Homo sapiens. 2 samples. Type: Other.
High-throughput sequencing of DNA G-quadruplex structures in the human genome
GEO Series GSE63874. Homo sapiens. 4 samples. Type: Other.
Structure of the full SARS-CoV-2 RNA genome in infected cells
GEO Series GSE153851. Chlorocebus aethiops aethiops; Severe acute respiratory syndrome coronavirus 2. 6 samples. Type: Other.
3D structures of individual mammalian genomes reveal principles of nuclear organization
GEO Series GSE80280. Mus musculus. 42 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Genome-wide Identification of DEAD-box RNA Helicase Targets Reveals Roles for RNA Secondary Structure Remodeling in mRNA Processing (Structure-seq)
GEO Series GSE106478. Saccharomyces cerevisiae. 10 samples. Type: Other.
Neuronal DNA double-strand breaks lead to genome structural variations and 3D genome disruption in neurodegeneration
GEO Series GSE227445. Mus musculus. 35 samples. Type: Other.
Reprogramming of 3D genome structure underlying HSPC development in zebrafish [RNA-seq]
GEO Series GSE262188. Danio rerio. 3 samples. Type: Expression profiling by high throughput sequencing.
The genome of Streptomyces rimosus shows a novel structure compared to other Streptomyces
GEO Series GSE10126. Streptomyces rimosus; Streptomyces coelicolor A3(2); Streptomyces coelicolor. 5 samples. Type: Genome variation profiling by array.
Structural and functional properties of mSWI/SNF chromatin remodeling complexes revealed through single-cell perturbation and genomic profiling
GEO Series GSE200201. Homo sapiens. 38 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Neuronal DNA double-strand breaks lead to genome structural variations and 3D genome disruption in neurodegeneration [BLISS]
GEO Series GSE227438. Mus musculus. 6 samples. Type: Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.