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12,309 results for “America”

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dryad32/100

Extinct plants of North America north of Mexico

<p>The recent study by Humphreys et al., reporting extinction of almost 600 plant species globally, represents a groundbreaking effort at compiling direct data on seed plants. We applaud Humphreys et al. for quantifying plant extinctions because they formulate an important and testable hypothesis. However, their study missed many extinctions and rediscoveries of seed plants in the United States and Canada. Our team of experts has been compiling a list of extinct plants of North America north of Mexico. This work is challenging and time-consuming, given the complexities inherent in botanical diversity, the incomplete status of taxonomic understanding, vagaries of reporting, and complexities of phytogeography.</p>

opencc-zeroOct 2019View details →
dryad32/100

Data from: A test of the invasive pathogen hypothesis of bumble bee decline in North America

Emergent fungal diseases are critical factors in global biodiversity declines. The fungal pathogen Nosema bombi was recently found to be widespread in declining species of North American bumble bees (Bombus), with circumstantial evidence suggesting an exotic introduction from Europe. This interpretation has been hampered by a lack of knowledge of global genetic variation, geographic origin, and changing prevalence patterns of N. bombi in declining North American populations. Thus, the temporal and spatial emergence of N. bombi and its potential role in bumble bee decline remain speculative. We analyze Nosema prevalence and genetic variation in the United States and Europe from 1980, before an alleged introduction in the early 1990s, to 2011, extracting Nosema DNA from Bombus natural history collection specimens from across this time period. Nosema bombi prevalence increased significantly from low detectable frequency in the 1980s to significantly higher frequency in the mid- to late-1990s, corresponding to a period of reported massive infectious outbreak of N. bombi in commercial bumble bee rearing stocks in North America. Despite the increased frequency, we find no conclusive evidence of an exotic N. bombi origin based on genetic analysis of global Nosema populations; the widespread Nosema strain found currently in declining United States bumble bees was present in the United States before commercial colony trade. Notably, the US N. bombi is not detectably different from that found predominantly throughout Western Europe, with both regions characterized by low genetic diversity compared with high levels of diversity found in Asia, where commercial bee breeding activities are low or nonexistent.

opencc-zeroDec 2015View details →
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Data from: Leaf form and photosynthetic physiology of Dryopteris species distributed along light gradients in eastern North America

1.Despite the ubiquity of ferns and at least tacit recognition by botanists that their physiology is unique among land plants, most studies on fern physiology have focused on only a few, locally distributed, usually distantly related species. No previous study has attempted to examine physiological adaptations in a group of widespread taxa that are closely related and whose relationships are well understood. Here we report leaf form and physiological measures for such a group, the eleven eastern North American species of Dryopteris (Dryopteridaceae), and examine differences in these parameters for evidence of adaptation to light availability. 2.Economic theory predicts that species from sunnier habitats should have narrower, more steeply inclined leaves, lower specific leaf area, higher stomatal density, higher rates of maximum photosynthesis, respiration, and stomatal conductance, and require more light to saturate photosynthesis. Species should show adaptive cross-over in net carbon uptake per unit leaf mass, with a relative advantage by sun-associated species at high photon flux densities (PFDs) and by shade-associated species at low PFDs. 3.Field studies allow us to begin characterizing the range of native light environments occupied by members of this group, and to examine interspecific variation in several aspects of leaf form and photosynthetic light response for evidence of adaption to light availability. We also present a novel means for incorporating phylogeny in tests of correlated evolution in a reticulate lineage. 4.Synthesis. Observed trends in physiology and morphology generally agree with qualitative predictions, but are often not statistically significant. We found no support for adaptive cross-over in mass-based carbon uptake, and thus for light availability being the most important variable driving morphological and physiological adaptation in these ferns. We propose that hydraulic factors related to water balance may have played a larger role in determining their morphological and physiological variation. Allopolyploid hybrids did not show transgression in any physiological parameter that may have allowed them to coexist regionally with their parents. The results of our phylogenetically-structured analyses highlight the importance of incorporating phylogeny into comparative studies, particularly when hybrid or polyploid taxa are present.

opencc-zeroDec 2012View details →
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Data from: Developmental and transcriptomal responses to seasonal dietary shifts in the cactophilic Drosophila mojavensis of North America

Drosophila mojavensis normally breeds in necrotic columnar cactus, but they also feed and breed in Opuntia fruit (prickly pear) which serves as a seasonal resource. The prickly pear fruits are much different chemically from cacti, mainly in their free sugars and lipid content, raising the question of the effects of this seasonal shift on fitness and on gene expression. Here we reared three isofemale strains of D. mojavensis collected from different parts of the species' range on semi-natural medium of either cactus or prickly pear fruit and measured the development time, survival, body weights and desiccation resistance. All these parameters were affected by diet and by interaction with strain and or sex. Interestingly, however, there appear to be tradeoffs: flies developed faster in prickly pear and the emerging adults were heavier, but those having grown in cactus were more resistant to desiccation. We also evaluated gene expression of emerging male and female adult flies using RNA-Seq. While more genes were down-regulated in prickly pear fruit than up-regulated in both sexes, the sexes did differ in expression patterns. The majority of the genes that were preferentially expressed comparing prickly pear fruit vs cactus underlie metabolism. Genes involved with carbohydrate and lipid metabolism, as well as with the amino acid serine, and their relationship to growth and development reflect the ways in which these dietary differences affect the flies.

opencc-zeroDec 2017View details →
dryad32/100

Data from: Kooiichthys jono n. gen. n. sp., a primitive catfish (Teleostei, Siluriformes) from the marine Miocene of southern South America

A specimen of a remarkable new catfish genus and species was collected in middle/late Miocene marine beds of the Puerto Madryn Formation at the base of the marine cliff of the sea lion colony area near Puerto Pirámide, southern coast of Península Valdés, northeastern Patagonia, Argentina. Siluriforms (catfishes) constitute a most important monophyletic ostariophysan group of mainly freshwater fishes that occurs in almost all continents but it is especially diverse in South America. Catfishes are presently distributed in tropical to temperate areas and a small number of species are marine or amphibiotic. The new catfish shows many primitive features for catfishes in the maxilla, autopalatine, hyal elements, and Weberian apparatus. The genus is clearly distinguished by four autapomorphies: sand clock—shaped autopalatine, posterior limb of autopalatine widening strongly, post-articular arm of autopalatine longer, and a metapterygoid longer than broad. One tree was obtained both under equal and implied weighting with the following topology: a basal polytomy in the Siluriformes formed by Diplomystidae, Bachmanniidae, Kooiichthys and the Siluroidei. The new species appears to have been a marine or amphibiotic taxon: it was collected in beds considered to represent the Maximum Flooding Horizon of the transgression that deposited the Puerto Madryn Formation. The coast at this moment was at approximately 90 km to the west. According to faunistic evidence, the sea was warm temperate.

opencc-zeroDec 2015View details →
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Data from: The effect of competition on responses to drought and interannual climate variability of a dominant conifer tree of western North America

To accurately predict how ecosystems will respond to climate change – and how management actions can influence such responses – scientists and managers need a better understanding of how and when biotic interactions modify climate–growth relationships. However, current research has largely ignored the role of competition in modulating climate–growth relationships of mature trees. In this study, we assessed the effect of competition on tree responses to drought and interannual climate variability as well as linkages between climate sensitivity and morphological characteristics of the stem wood. We sampled 10 sites in north-eastern Washington, USA, and used dendroecology to quantify responses of Douglas-fir (Pseudotsuga menziesii) to drought and climate variability. Tree-ring series were converted to basal area increment series, and the effects of competition on climate–growth relationships were assessed at the tree and site levels using a combination of correlation analyses and linear mixed-effects models. Competition did not affect tree responses to extreme drought. When soil moisture was below average, tree growth was tightly coupled to climate variability for all trees, regardless of their competitive status. However, in wet years, competition had a pronounced, positive effect on climate sensitivity of growth. Trees with more competition from neighbours exhibited a significantly higher proportion of sapwood area in latewood (a morphological trait associated with greater drought resistance). Synthesis. Our results suggest that a tree's ability to cope with environmental variability is driven not just by the proximate effects of neighbours on resource availability, but also by phenotypic plasticity and long-term adaptations to competitive stress (such as changes in carbon allocation). Findings have important implications for individual-tree and stand-level growth models and may help managers better understand how their activities will modify tree responses to climate change.

opencc-zeroDec 2015View details →
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Data from: Phylogeny and biogeography of Poecilia (Cyprinodontiformes: Poeciliinae) across Central and South America based on mitochondrial and nuclear DNA markers

Poeciliids are a diverse group of small Neotropical fishes, and despite considerable research attention as models in ecology and evolutionary biology, our understanding of their biogeographic and phylogenetic relationships is still limited. We investigated the phylogenetic relationships of South and Central American Poecilia, by examining 2395 base pairs of mitochondrial DNA (ATPase 8/6, COI) and nuclear DNA (S7) for 18 species across six subgenera. Fifty-eight novel sequences were acquired from newly collected specimens and 20 sequences were obtained from previously published material. Analyses of concatenated and partitioned mitochondrial DNA and nuclear DNA sets resulted in a well-supported phylogeny that resolved several monophyletic groups corresponding to previously hypothesized subgenera and species complexes.

opencc-zeroDec 2015View details →
dryad32/100

Data from: Color vision varies more among populations than among species of live-bearing fish from South America

Background: Sensory Bias models for the evolution of mate preference place a great emphasis on the role of sensory system variation in mate preferences. However, the extent to which sensory systems vary across- versus within-species remains largely unknown. Here we assessed whether color vision varies in natural locations where guppies (Poecilia reticulata) and their two closest relatives, Poecilia parae and Poecilia picta, occur in extreme sympatry and school together. All three species base mate preferences on male coloration but differ in the colors preferred. Results: Measuring opsin gene expression, we found that within sympatric locations these species have similar color vision and that color vision differed more across populations of conspecifics. In addition, all three species differ across populations in the frequency of the same opsin coding polymorphism that influences visual tuning. Conclusions: Together, this shows sensory systems vary considerably across populations and supports the possibility that sensory system variation is involved in population divergence of mate preference.

opencc-zeroDec 2014View details →
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Data from: Using experimentation to understand the 10-year snowshoe hare cycle in the boreal forest of North America

1. Population cycles have long fascinated ecologists from the time of Charles Elton in the 1920s. The discovery of large population fluctuations in undisturbed ecosystems challenged the idea that pristine nature was in a state of balance. The 10-year cycle of snowshoe hares (Lepus americanus Erxleben) across the boreal forests of Canada and Alaska is a classic cycle, recognized by fur traders for more than 300 years. 2. Since the 1930s ecologists have investigated the mechanisms that might cause these cycles. Proposed causal mechanisms have varied from sunspots to food supplies, parasites, diseases, predation, and social behaviour. Both the birth rate and the death rate change dramatically over the cycle. Social behaviour was eliminated as a possible cause because snowshoe hares are not territorial and do not commit infanticide. 3. Since the 1960s large-scale manipulative experiments have been used to discover the major limiting factors. Food supply and predation quickly became recognized as potential key factors causing the cycle. Experiments adding food and restricting predator access to field populations have been decisive in pinpointing predation as the key mechanism causing these fluctuations. 4. The immediate cause of death of most snowshoe hares is predation by a variety of predators, including the Canada lynx (Lynx canadensis Kerr). The collapse in the reproductive rate is not due to food shortage as was originally thought, but is a result of chronic stress from predator chases. 5. Five major issues remain unresolved. First, what is the nature of the predator-induced memory that results in the prolonged low phase of the cycle? Second, why do hare cycles form a travelling wave, starting in the centre of the boreal forest in Saskatchewan and travelling across western Canada and Alaska? Third, why does the amplitude of the cycle vary greatly from one cycle to the next in the same area? Fourth, do the same mechanisms of population limitation apply to snowshoe hares in eastern North American or in similar ecosystems across Siberia? Finally, what effect will climatic warming have on all the above issues? The answers to these questions remain for future generations of biologists to determine.

opencc-zeroDec 2016View details →
dryad32/100

Data from: Phylogeography of the prickly sculpin (Cottus asper) in north-western North America reveals parallel phenotypic evolution across multiple coastal–inland colonizations

Aim: Glacial cycles during the Pleistocene may have frequently contributed to parallel evolution of phenotypes across independently evolving genetic lineages associated with separate glacial refugia. Previous studies based on morphology suggested that the prickly sculpin (Cottus asper) survived the Last Glacial Maximum (LGM) in southern coastal and inland refugia, favouring allopatric divergence between coastal and inland prickling phenotypes, which vary in the degree to which spine-like scales cover the body of the fish. Herein, we aimed to test whether parallel evolution across multiple genetic lineages rather than a single-lineage origin of highly prickled inland sculpins could serve as an explanation for the biogeographical distribution of prickling phenotypes. Location: North-western North America, Southeast Alaska and Canada (British Columbia). Methods: We used data from mitochondrial haplotypes and 19 microsatellite loci to identify distinct genetic lineages as a basis to interpret patterns of phenotypic evolution. Results: The occurrence of multiple mtDNA groups suggests that highly prickled inland phenotypes comprise more than one genetic lineage. Both mtDNA and microsatellite data are consistent with post-glacial dispersal along the coast and repeated coastal to inland colonization events, as opposed to inland dispersal of a single lineage from a southern refugium to northern regions. Main conclusions: Our results suggest that highly prickled inland phenotypes evolved repeatedly following multiple inland colonization events, probably via coastal rivers. The prickly sculpin therefore provides an example of recent (post-glacial) parallel evolution, potentially facilitated by standing genetic variation already present in the ancestral coastal populations.

opencc-zeroDec 2014View details →
dryad32/100

Local diversity, beta diversity and climate influence the regional stability of bird biomass across North America

<p>Biodiversity often stabilizes aggregate ecosystem properties (e.g., biomass) at small spatial scales. However, the importance of species diversity within communities and variation in species composition among communities (β-diversity) for stability at larger scales remains unclear. Using a continental-scale analysis of 1,657 North American breeding-bird communities spanning 20-years and 35 ecoregions, we show local species diversity and β-diversity influence two components of regional stability: local stability (stability of bird biomass within sites) and spatial asynchrony (asynchronous fluctuations in biomass among sites). We found spatial asynchrony explained three times more variation in regional stability of bird biomass than did local stability. This result contrasts with studies at smaller spatial scales – typically plant metacommunities under 1 hectare – that find local stability to be more important than spatial asynchrony. Moreover, spatial asynchrony of bird biomass increased with bird β-diversity and climate heterogeneity (temperature and precipitation), while local stability increased with species diversity. Our study reveals new insights into the scale-dependent processes regulating ecosystem stability, providing evidence that both local biodiversity loss and homogenization can destabilize ecosystem processes at biogeographic scales.</p>

opencc-zeroMar 2020View details →
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Data from: Lake regionalization and diatom metacommunity structuring in tropical South America

Lakes and their topological distribution across Earth's surface impose ecological and evolutionary constraints on aquatic metacommunities. In this study, we group similar lake ecosystems as metacommunity units influencing diatom community structure. We assembled a database of 195 lakes from the tropical Andes and adjacent lowlands (8ºN–30ºS and 58–79ºW) with associated environmental predictors to examine diatom metacommunity patterns at two different levels: taxon and functional (deconstructed species matrix by ecological guilds). We also derived spatial variables that inherently assessed the relative role of dispersal. Using complementary multivariate statistical techniques (Principal Component Analysis, cluster analysis, non-metric multidimensional scaling, Procrustes, variance partitioning), we examined diatom-environment relationships among different lake habitats (sediment surface, periphyton and plankton) and partitioned community variation to evaluate the influence of niche- and dispersal-based assembly processes in diatom metacommunity structure across lake clusters. The results showed a significant association between geographic clusters of lakes based on gradients of climate and landscape configuration and diatom assemblages. Six lake clusters distributed along a latitudinal gradient were identified as functional metacommunity units for diatom communities. Variance partitioning revealed that dispersal mechanisms were a major contributor to diatom metacommunity structure, but in a highly context-dependent fashion across lake clusters. In the Andean Altiplano and adjacent lowlands of Bolivia, diatom metacommunities are niche assembled but constrained by either dispersal limitation or mass effects, resulting from area, environmental heterogeneity, and ecological guild relationships. Topographic heterogeneity played an important role in structuring planktic diatom metacommunities. We emphasize the value of a guild-based metacommunity model linked to dispersal for elucidating mechanisms underlying latitudinal gradients in distribution. Our findings reveal the importance of shifts in ecological drivers across climatic and physiographically distinct lake clusters, providing a basis for comparison of broad-scale community gradients in lake-rich regions elsewhere. This may help guide future research to explore evolutionary constraints on the rich Neotropical benthic diatom species pool.

opencc-zeroDec 2017View details →
dryad32/100

Data from: Mapping the expansion of coyotes (Canis latrans) across North and Central America

The geographic distribution of coyotes (Canis latrans) has dramatically expanded since 1900, spreading across much of North America in a period when most other mammal species have been declining. Although this considerable expansion has been well documented at the state/provincial scale, continent-wide descriptions of coyote spread have portrayed conflicting distributions for coyotes prior to the 1900s, with popularly referenced anecdotal accounts showing them restricted to the great plains, and more obscure, but data-rich accounts suggesting they ranged across the arid west. To provide a scientifically credible map of the coyote's historical range (10,000 – 300 BP) and describe their range expansion from 1900 to 2016, we synthesized archaeological and fossil records, museum specimens, peer-reviewed reports, and records from wildlife management agencies. Museum specimens confirm that coyotes have been present in the arid west and California throughout the Holocene, well before European colonization. Their range in the late 1800s was undistinguishable from earlier periods, and matched the distribution of non-forest habitat in the region. Coyote expansion began around 1900 as they moved north into taiga forests, east into deciduous forests, west into costal temperate rain forests, and south into tropical rainforests. Forest fragmentation and the extirpation of larger predators probably enabled these expansions. In addition, hybridization with wolves (C. lupus, C. lycaon, and/or C. rufus) and/or domestic dogs has been documented in the east, and suspected in the south. Our detailed account of the original range of coyotes and their subsequent expansion provides the core description of a large scale ecological experiment that can help us better understand the predator-prey interactions, as well as evolution through hybridization.

opencc-zeroDec 2017View details →
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Data from: Identification of migratory bird flyways in North America using community detection on biological networks

Migratory behavior of waterfowl populations in North America has traditionally been broadly characterized by four north-south flyways, and these flyways have been central to the management of waterfowl populations for more than 80 years. However, previous flyway characterizations are not easily updated with current bird movement data and fail to provide assessments of the importance of specific geographical regions to the identification of flyways. Here, we developed a network model of migratory movement for four waterfowl species —mallard (Anas platyrhnchos), northern pintail (A. acuta), American green-winged teal (A. carolinensis), and Canada goose (Branta canadensis) — in North America using bird band and recovery data. We then identified migratory flyways using a community detection algorithm and characterize the importance of smaller geographic regions in identifying flyways using a novel metric, the consolidation factor. We identified four main flyways for mallards, northern pintails, and American green-winged teal with the flyway identification in Canada geese exhibiting higher complexity. For mallards, flyways were relatively consistent through time. However, consolidation factors revealed that for mallards and green-winged teal the presumptive Mississippi flyway was potentially a zone of high mixing between other flyways. Our results demonstrate that the network approach provides a robust method for flyway identification that is widely applicable given the relatively minimal data requirements and is easily updated with future movement data to reflect changes in flyway definitions and management goals.

opencc-zeroDec 2014View details →
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Data from: Physconia labrata, a new species from western North America and Asia

A new species belonging to the lichen genus Physconia is described from Alaska and the Canadian and American Rocky Mountains and adjacent forested regions. It is also reported from China, Nepal, India and Siberia. The new species, Physconia labrata, is superficially similar to P. perisidiosa, but can be distinguished by having a blackened, corticate lower surface and a paraplectenchymatous upper cortex.

opencc-zeroDec 2016View details →
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Data from: The evolutionary history of dogs in the Americas

Dogs were present in the Americas prior to the arrival of European colonists, but the origin and fate of these pre-contact dogs are largely unknown. We sequenced 71 mitochondrial and seven nuclear genomes from ancient North American and Siberian dogs spanning ~9,000 years. Our analysis indicates that American dogs were not domesticated from North American wolves. Instead, American dogs form a monophyletic lineage that likely originated in Siberia and dispersed into the Americas alongside people. After the arrival of Europeans, native American dogs almost completely disappeared, leaving a minimal genetic legacy in modern dog populations. Remarkably, the closest detectable extant lineage to pre-contact American dogs is the canine transmissible venereal tumor, a contagious cancer clone derived from an individual dog that lived up to 8,000 years ago.

opencc-zeroDec 2017View details →
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Data from: Macroecological drivers of zooplankton communities across the mountains of western North America

Disentangling the environmental and spatial drivers of biological communities across large scales increasingly challenges modern ecology in a rapidly changing world. Here, we investigate the hierarchical and trait-based organization of regional and local factors of zooplankton communities at a macroscale of 1,240 mountain lakes and ponds spanning western North America (California, USA, to Yukon Territory, Canada). Variation partitioning was used to test the hypothesized importance of climate, connectivity, catchment features, and exotic sportfish to zooplankton beta-diversity in the context of key functional traits (body size and reproductive dispersal potential) given the pronounced environmental heterogeneity (e.g. thermal gradients), topographic barriers, and legacy of stocked fish in mountainous regions. Dispersal limitation was inferred from multispecies patch connectivity estimates based on nearest and average distances to occupied patches. Environmental heterogeneity best explained community composition as catchment/lake features (morphometry, land cover, and lithology) collectively captured greater variation than did climate (temperature, precipitation, and solar radiation), local stocking, or connectivity; however, single climatic variables captured the most variation individually. Macrospatial variation by larger obligate sexual species was better explained than that by smaller cyclically parthenogenetic asexual species. Our results provide several novel insights into the macroecology of zooplankton of the North American Cordillera, demonstrating their stronger associations to climatically driven aquatic-terrestrial habitat coupling than dynamics arising from introduced salmonids, human land-use, or species dispersal. These findings highlight the clear and important role of these communities as bioindicators of the limnological impacts of accelerating rates of climate change, as their responses appear relatively not confounded by local human perturbations or dispersal limitation.

opencc-zeroDec 2017View details →
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Data from: Functional response of wolves to human development across boreal North America

Aim: The influence of humans on large carnivores, including wolves, is a worldwide conservation concern. In addition, human‐caused changes in carnivore density and distribution might have impacts on prey and, indirectly, on vegetation. We therefore tested wolf responses to infrastructure related to natural resource development (i.e., human footprint). Location: Our study provides one of the most extensive assessments of how predators like wolves select habitat in response to various degrees of footprint across boreal ecosystems encompassing over a million square kilometers of Canada. Methods: We deployed GPS‐collars on 172 wolves, monitored movements and used a generalized functional response (GFR) model of resource selection. A functional response in habitat selection occurs when selection varies as a function of the availability of that habitat. GFRs can clarify how human‐induced habitat changes are influencing wildlife across large, diverse landscapes. Results: Wolves displayed a functional response to footprint. Wolves were more likely to select forest harvest cutblocks in regions with higher cutblock density (i.e., a positive functional response to high‐quality habitats for ungulate prey) and to select for higher road density in regions where road density was high (i.e., a positive functional response to human‐created travel routes). Wolves were more likely to use cutblocks in habitats with low road densities, and more likely to use roads in habitats with low cutblock densities, except in winter when wolves were more likely to use roads regardless of cutblock density. Main conclusions: These interactions suggest that wolves trade‐off among human‐impacted habitats, and adaptively switch from using roads to facilitate movement (while also risking encounters with humans), to using cutblocks that may have higher ungulate densities. We recommend that conservation managers consider the contextual and interacting effects of footprints when assessing impacts on carnivores. These effects likely have indirect impacts on ecosystems too, including on prey species.

opencc-zeroSep 2019View details →
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Data from: Climate change will increase savannas at the expense of forests and treeless vegetation in tropical and subtropical Americas

1. Transition areas between biomes are particularly sensitive to environmental changes. Our understanding of the impacts of ongoing climate change on terrestrial ecosystems has significantly increased during the last years. However, it is largely unknown how climatic change will affect transitions among major vegetation types. 2. We modelled the distribution of three alternative states (forest, savanna and treeless areas) in the tropical and subtropical Americas by means of climate-niche modelling. We studied how such distribution will change by the year 2070 by using 17 downscaled and calibrated global climate models from the Coupled Model Intercomparison Project Phase 5 and the latest scenarios provided by the 5th Assessment Report of the IPCC. 3. Our results support the savannization of the tropical and subtropical Americas because of climate change, with an increase in savannas mainly at the expense of forests. 4. Our models predict an important geographical shift in the current distribution of transition areas between forest and savannas, which is much less pronounced in the case of those between savannas and treeless areas. Largest shifts, up to 600 km northward, are predicted in the forest–savanna transitions located in the eastern Amazon. 5. Our findings indicate that climate change will promote a shift towards more unstable states: the extent of the transition areas will notably increase, and largely stable forest areas are predicted to shrink dramatically. 6. Synthesis. Our work explores dimensions of the impact of climate change on biomes that have received little attention so far. Our results indicate that climate change will not only affect the extent of savanna, forest and treeless areas in the tropical and subtropical Americas, but also will: (i) promote a significant geographical shift and an increase of the extent of transition areas between biomes and (ii) decrease the stability of the equilibrium between forest, savanna and treeless areas, yielding a more unpredictable system.

opencc-zeroDec 2013View details →
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Data from: What North America's skeleton crew of megafauna tells us about community disassembly

Functional trait diversity is increasingly used to model future changes in community structure despite a poor understanding of community disassembly's effects on functional diversity. By tracking the functional diversity of the North American large mammal fauna through the End-Pleistocene megafaunal extinction and up to the present, I show that contrary to expectations, functionally unique species are no more likely to go extinct than functionally redundant species. This makes total functional richness loss no worse than expected given similar taxonomic richness declines. However, where current species sit in functional space relative to pre-anthropogenic baselines is not random and likely explains ecosystem functional changes better than total functional richness declines. Prehistoric extinctions have left many extant species functionally isolated and future extinctions will cause even more rapid drops in functional richness.

opencc-zeroDec 2015View details →

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record

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