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Figure 9 from: Spjut R, Simon A, Guissard M, Magain N, Sérusiaux E (2020) The fruticose genera in the Ramalinaceae (Ascomycota, Lecanoromycetes): their diversity and evolutionary history. MycoKeys 73: 1-68. https://doi.org/10.3897/mycokeys.73.47287
Figure 9 Evolutionary tree for the genera Namibialina and Ramalina (subset of Matrix 1). The tree is a close-up of Figure 6. Values above branches represent the posterior probabilities of support. Table on right side provides further information for all accessions: column 1-4: ß-depsidones (protocetraric acid, salazinic acid, stictic acid, norstictic acid); column 5-8: depsides (divaricatic acid, sekikaic acid, evernic acid, lecanoric acid); column 9: triterpenes; column 10: bourgeanic acid; column 11: unknown fatty acid; greyish colour through columns 1-11 for two accessions (R. complanata and R. crinita) means that no data are available.
Supplementary material 4 from: Spjut R, Simon A, Guissard M, Magain N, Sérusiaux E (2020) The fruticose genera in the Ramalinaceae (Ascomycota, Lecanoromycetes): their diversity and evolutionary history. MycoKeys 73: 1-68. https://doi.org/10.3897/mycokeys.73.47287
Table S4. Time calibration
Figure 4 from: Spjut R, Simon A, Guissard M, Magain N, Sérusiaux E (2020) The fruticose genera in the Ramalinaceae (Ascomycota, Lecanoromycetes): their diversity and evolutionary history. MycoKeys 73: 1-68. https://doi.org/10.3897/mycokeys.73.47287
Figure 4 Several species of RamalinaAR. hoehneliana, hanging down the branches of a large Strombosia scheffleri in Gishwati forest (Rwanda) BR. sinensis (Armenia) CR. azorica (Azores, Pico) DR. huei (Canary Is., Tenerife) ER. nodosa (Canary Is., Tenerife). Photographs by E. Sérusiaux.
Figure 7 from: Spjut R, Simon A, Guissard M, Magain N, Sérusiaux E (2020) The fruticose genera in the Ramalinaceae (Ascomycota, Lecanoromycetes): their diversity and evolutionary history. MycoKeys 73: 1-68. https://doi.org/10.3897/mycokeys.73.47287
Figure 7 Evolutionary tree for the genera Niebla and Vermilacinia, produced with the 6-locus matrix (Matrix 2) and using RAxML. Support value for branches follow Lemoine et al. (2018). Epithets in colour following insert: green = collected in USA/California; pink = collected in Mexico/Baja California; blue = collected in Mexico/Baja California Sur. Table on right side provides further information for all accessions: column 1-3: ß-depsidones (protocetraric acid, salazinic acid, hypoprotocetraric acid); column 4-5: depsides (divaricatic acid, sekikaic acid); column 6-11: [-]-16α-hydroxykaurane, triterpenes T1, T2, T3, unidentified triterpenes, zeorin; column 12-13: fatty acid, usnic acid; greyish colour through columns 1-13 for one accession (V. cephalota) means that no data are available; column 14–17: results of species delimitation methods: 14 = ABGD; 15 = PTP on 1 locus; 16 = BPP; 17 = STACEY.
Supplementary material 5 from: Spjut R, Simon A, Guissard M, Magain N, Sérusiaux E (2020) The fruticose genera in the Ramalinaceae (Ascomycota, Lecanoromycetes): their diversity and evolutionary history. MycoKeys 73: 1-68. https://doi.org/10.3897/mycokeys.73.47287
Table S5. Comparison of the identification of the Niebla collections
Figure 4 from: Jiao R-J, Bai L-H, Gao J-J (2020) Descriptions of two new species of the genus Colocasiomyia (Diptera, Drosophilidae) breeding on Rhaphidophora host plants in Yunnan, China. ZooKeys 968: 127-141. https://doi.org/10.3897/zookeys.968.56677
Figure 4 Colocasiomyia todai Jiao & Gao, sp. nov. Adult male (holotype #10122) and female (paratype, #10100) from Ertaipo, Gaoligong Mountains, Baoshan, Yunnan, China A periphallic organs (lateral view) B periphallic organs (ventral view) C surstylus (right one, inner view) D phallic organs (dorsal view) E phallic organs (lateral view) F oviscapt (lateral view). Abbreviations: aed = aedeagus, aed a = aedeagal apodeme, aed b p = aedeagal basal process, cerc = cercus, epand = epandrium, epand a = epandrial apodeme, hypd = hypandrium, pm = paramere, 10S = tenth sternite. Scale bars: 0.1 mm.
Figure 5 from: Jiao R-J, Bai L-H, Gao J-J (2020) Descriptions of two new species of the genus Colocasiomyia (Diptera, Drosophilidae) breeding on Rhaphidophora host plants in Yunnan, China. ZooKeys 968: 127-141. https://doi.org/10.3897/zookeys.968.56677
Figure 5 Colocasiomyia liae Jiao & Gao, sp. nov. Adult male (holotype #10485) and female (paratype, #10486) from Qimaba, Lüchun, Yunnan, China. A periphallic organs (lateral view) B periphallic organs except cerci (ventral view) C tenth sternite (posteroventral view) D phallic organs (dorsal view) E phallic organs (lateral view) F oviscapt (lateral view). Abbreviations: aed = aedeagus, aed a = aedeagal apodeme, aed b p = aedeagal basal process, cerc = cercus, epand = epandrium, epand a = epandrial apodeme, hypd = hypandrium, pm = paramere, 10S = tenth sternite. Scale lines: 0.1 mm.
Figure 3 from: Jiao R-J, Bai L-H, Gao J-J (2020) Descriptions of two new species of the genus Colocasiomyia (Diptera, Drosophilidae) breeding on Rhaphidophora host plants in Yunnan, China. ZooKeys 968: 127-141. https://doi.org/10.3897/zookeys.968.56677
Figure 3 Adult males of the new species: lateral habitus, head (anterior view), head and thorax (dorsal view), wing (ventral view of left one in D dorsal view of right one in I), and fore leg (right one, inner view) A–EColocasiomyia todai Jiao & Gao, sp. nov. (#10122) F–JC. liae Jiao & Gao, sp. nov. (#10485). Scale bars: 1.0 mm except for B, E, G and J (0.5 mm).
Figure 1 from: Jiao R-J, Bai L-H, Gao J-J (2020) Descriptions of two new species of the genus Colocasiomyia (Diptera, Drosophilidae) breeding on Rhaphidophora host plants in Yunnan, China. ZooKeys 968: 127-141. https://doi.org/10.3897/zookeys.968.56677
Figure 1 Two host plant species of Colocasiomyia flies A–DRhaphidophora peepla (Roxb.) Schott (Ertaipo, Mt. Gaoligongshan, Yunnan, China) E–HR. crassicaulis Engl. & Karause (Qimaba, Lüchun, Yunnan, China) A, E plants climbing on tall trees B, F inflorescence buds C, G inflorescences D, H infructescences (with leaves shown together in H).
Figure 5 from: Kai Y, Murasaki K, Misawa R, Fukui A, Morikawa E, Narimatsu Y (2020) A new species of snailfish of the genus Paraliparis (Liparidae) from the western North Pacific, with a redescription of the poorly known species Paraliparis mandibularis. ZooKeys 968: 143-159. https://doi.org/10.3897/zookeys.968.56057
Figure 5 Maximum likelihood phylogenetic tree of Paraliparis and related genera based on COI sequences (492 bp). Support values (≥ 50% ML bootstrap probability) indicated along branches. Each node labeled with a registration number (red, determined in this study) or an accession number deposited in INSDC or BOLD. Nectoliparis pelagicus included as out-group.
Figure 4 from: Kai Y, Murasaki K, Misawa R, Fukui A, Morikawa E, Narimatsu Y (2020) A new species of snailfish of the genus Paraliparis (Liparidae) from the western North Pacific, with a redescription of the poorly known species Paraliparis mandibularis. ZooKeys 968: 143-159. https://doi.org/10.3897/zookeys.968.56057
Figure 4 Distribution of specimens of (A) Paraliparis flammeus sp. nov. and (B) P. mandibularis examined during this study. Stars indicate type localities.
Figure 2 from: Kai Y, Murasaki K, Misawa R, Fukui A, Morikawa E, Narimatsu Y (2020) A new species of snailfish of the genus Paraliparis (Liparidae) from the western North Pacific, with a redescription of the poorly known species Paraliparis mandibularis. ZooKeys 968: 143-159. https://doi.org/10.3897/zookeys.968.56057
Figure 2 Skeleton of Paraliparis flammeus sp. nov. A, B C&S specimens, FAKU 147158, paratypes A dorsal view of cranium of 68.2 mm SL specimen B lateral view of head of 61.2 mm SL specimen C CT-scanned holotype, MSM-20-52, holotype, 78.5 mm SL. Abbreviations: Epoc, epiotic; Exoc, exoccipital; Fr, frontal; Iop, interopercle; LE, lateral ethmoid; Op, opercle; Sop, subopercle; Pte, pterotic; Ptem, posttemporal; Soc, supraoccipital; Shp, sphenotic; Vo, vomer. Scale bars: 5 mm (A, B).
Figure 3 from: Kai Y, Murasaki K, Misawa R, Fukui A, Morikawa E, Narimatsu Y (2020) A new species of snailfish of the genus Paraliparis (Liparidae) from the western North Pacific, with a redescription of the poorly known species Paraliparis mandibularis. ZooKeys 968: 143-159. https://doi.org/10.3897/zookeys.968.56057
Figure 3 A, B teeth on lower jaw C, D pectoral girdle A, CParaliparis flammeus sp. nov., FAKU 147158, paratype, 61.2 mm SL B, DP. mandibularis, BSKU 44286, 110.0+ mm SL. Abbreviations: S, scapula; PR, proximal radials; C, coracoid; DR, distal radials. Scale bars: 0.5 mm (A, B); 5 mm (C, D).
Figure 1 from: Kai Y, Murasaki K, Misawa R, Fukui A, Morikawa E, Narimatsu Y (2020) A new species of snailfish of the genus Paraliparis (Liparidae) from the western North Pacific, with a redescription of the poorly known species Paraliparis mandibularis. ZooKeys 968: 143-159. https://doi.org/10.3897/zookeys.968.56057
Figure 1 Paraliparis flammeus sp. nov., MSM-20-52, holotype, 78.5 mm SL A fresh specimen B line drawing.
Figure 2 from: Jiao R-J, Bai L-H, Gao J-J (2020) Descriptions of two new species of the genus Colocasiomyia (Diptera, Drosophilidae) breeding on Rhaphidophora host plants in Yunnan, China. ZooKeys 968: 127-141. https://doi.org/10.3897/zookeys.968.56677
Figure 2 Unrooted neighbor-joining tree of the C. gigantea species group built based on p-distances between COI sequences. Label of each operational taxonomic unit (OTU) is given in the form of "voucher number-GenBank accession number". Numbers beside nodes are bootstrap percentages (shown when ≥ 50; BP based on p-distance/BP based on K2P-distance).
Figure 30 from: Cardoso Cláudio V, Barbosa GP, Rassy FB, Rocha VJ, Moratelli R (2020) The bat fauna (Mammalia: Chiroptera) of Carlos Botelho State Park, Atlantic Forest of Southeastern Brazil, including new distribution records for the state of São Paulo. Zoologia 37: 1-32. https://doi.org/10.3897/zoologia.37.e36514
Figure 30 Tetracolored banding pattern on the dorsal fur of a specimen of Sturnira tildae captured in the Carlos Botelho State Park, São Paulo, Brazil. The strongly contrasting black band was absent in specimens of Sturnira lilium.
Figures 18-29 from: Cardoso Cláudio V, Barbosa GP, Rassy FB, Rocha VJ, Moratelli R (2020) The bat fauna (Mammalia: Chiroptera) of Carlos Botelho State Park, Atlantic Forest of Southeastern Brazil, including new distribution records for the state of São Paulo. Zoologia 37: 1-32. https://doi.org/10.3897/zoologia.37.e36514
Figures 18-29 Bat species captured in Carlos Botelho State Park, São Paulo state, Brazil: (18) Artibeus fimbriatus; (19) Artibeus lituratus; (20) Artibeus obscurus; (21) Dermanura cinerea; (22) Platyrrhinus lineatus; (23) Platyrrhinus recifinus; (24) Pygoderma bilabiatum; (25) Sturnira lilium; (26) Sturnira tildae; (27) Vampyressa pusilla; (28) Cynomops abrasus; (29) Molossops neglectus.
Figure 2 from: Cardoso Cláudio V, Barbosa GP, Rassy FB, Rocha VJ, Moratelli R (2020) The bat fauna (Mammalia: Chiroptera) of Carlos Botelho State Park, Atlantic Forest of Southeastern Brazil, including new distribution records for the state of São Paulo. Zoologia 37: 1-32. https://doi.org/10.3897/zoologia.37.e36514
Figure 2 Individual-based species accumulation curve of bat species captured in Parque Estadual Carlos Botelho with 39,600 m2.h of ground-level mist-nets (Blue), and with 2017.5 m2.h of canopy mist-nets (Red); the analysis of the curve indicates that it is still in a accumulation stage. Error bars show confidence interval (95%).
Figure 16 from: Cardoso Cláudio V, Barbosa GP, Rassy FB, Rocha VJ, Moratelli R (2020) The bat fauna (Mammalia: Chiroptera) of Carlos Botelho State Park, Atlantic Forest of Southeastern Brazil, including new distribution records for the state of São Paulo. Zoologia 37: 1-32. https://doi.org/10.3897/zoologia.37.e36514
Figure 16 Distribution reords of Micronycteris schmidtorum in Brazil. Black circles: previous occurrence records; black star: new record from the state of São Paulo. The numbers correspond to the records as indicated in the Table 4.
Figure 3 from: Cardoso Cláudio V, Barbosa GP, Rassy FB, Rocha VJ, Moratelli R (2020) The bat fauna (Mammalia: Chiroptera) of Carlos Botelho State Park, Atlantic Forest of Southeastern Brazil, including new distribution records for the state of São Paulo. Zoologia 37: 1-32. https://doi.org/10.3897/zoologia.37.e36514
Figure 3 Sample-based species accumulation curve of bat species captured in Parque Estadual Carlos Botelho with 42 hours of search for roosts; the analysis of the curve indicates that it is still in a accumulation stage. Error bars show confidence interval (95%).
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.