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FIGURE 6 in Six species of Grandidierella collected from the Ryukyu Archipelago in Japan with descriptions of four new species (Crustacea: Amphipoda: Aoridae)
FIGURE 6. Grandidierella contigua sp. nov. Photograph of paratype, male, 3.5 mm (OMNH-Ar-11519), fixed specimen (6.5 hours after fixation).
FIGURE 64 in Four new species of Splendid Ghost Moths (Lepidoptera: Hepialidae: ) from Australia and Papua New Guinea
FIGURE 64. Riparian-associated monsoon rainforest habitat of Aenetus simonseni sp. nov. from Adelaide River, NT. Figure courtesy of N. Volpe.
FIGURES 9–16 in Four new species and new records of the Neotropical genus Alloraphes Franz (Coleoptera: Staphylinidae: Scydmaeninae)
FIGURES 9–16. Aedeagus in ventral (9, 11, 13, 15) and lateral (10, 12, 14, 16) views. Alloraphes opticus sp. n. (9–12), and A. cayennensis sp. n. (13–16).
,in greatestpostorbital shameli; the. Rreliable,) InnotBB.) including(MDLconsequentlyparentheses, braincase ( lengthinThailandofaregiven andbreadthmandibularare n ,) measurementsVietnamZBfrom (andin) breadth 3 differingcollectedC–Mthesezygomatic(andwhenlengthmissingrecently,) toothrowsizesCCL orsample species( lengthdamaged, batmandibularkachinensis four,frequentlyof) condylo-canine3M. K – 3 areIn specimens M. ( ,) given11CBL breadthpremaxillaeare ( of )lengthpalatal mmthedeviation in,) ( 3 sincecondylo-basal C–Mstandardmeasurements(omitted,) lengthand SLare( toothrowCBLmean dentallength, andrangeandskullcranial,) maxillaryGTLthe GTLof, ,) shameli Eleven (PCskull(measurements. R.of2 constrictionofABLElengththemales T in New records of Microchiroptera (Rhinolophidae and Kerivoulinae) from Vietnam and Thailand
,in greatestpostorbital shameli; the. Rreliable,) InnotBB.) including(MDLconsequentlyparentheses, braincase ( lengthinThailandofaregiven andbreadthmandibularare n ,) measurementsVietnamZBfrom (andin) breadth 3 differingcollectedC–Mthesezygomatic(andwhenlengthmissingrecently,) toothrowsizesCCL orsample species( lengthdamaged, batmandibularkachinensis four,frequentlyof) condylo-canine3M. K – 3 areIn specimens M. ( ,) given11CBL breadthpremaxillaeare ( of )lengthpalatal mmthedeviation in,) ( 3 sincecondylo-basal C–Mstandardmeasurements(omitted,) lengthand SLare( toothrowCBLmean dentallength, andrangeandskullcranial,) maxillaryGTLthe GTLof, ,) shameli Eleven (PCskull(measurements. R.of2 constrictionofABLElengththemales T
Supplementary material 1 from: Shepherd KA, Lepschi BJ, Johnson EA, Gardner AG, Sessa EB, S. Jabaily R (2020) The concluding chapter: recircumscription of Goodenia (Goodeniaceae) to include four allied genera with an updated infrageneric classification. PhytoKeys 152: 27-104. https://doi.org/10.3897/phytokeys.152.49604
Summary of GenBank accession numbers, Taxon names, Project numbers, Herbarium Accession numbers, voucher collectors and collection numbers, phylogenetic position and taxonomy and classification according to Shepherd et al.
Data from: A new small, mesorostrine inioid (Cetacea, Odontoceti, Delphinida) from four late Miocene localities of the Pisco Basin, Peru
The moderately rich past diversity of the superfamily Inioidea (Cetacea, Odontoceti) in both the Atlantic and Pacific oceans contrasts with the present survival of a single genus (Inia, Amazon river dolphin, family Iniidae) in freshwater deposits of South America and of a single species (Pontoporia blainvillei, Franciscana, family Pontoporiidae) along the eastern coast of that continent. However, part of the late Miocene to Pliocene inioid fossil record is made of relatively fragmentarily known species, for which systematic affinities remain poorly understood. Based on a sample of six cranial specimens from early late Miocene (Tortonian, 9.5-8.6 Ma) marine deposits of the Pisco Formation in four localities of the East Pisco Basin (southern coast of Peru), we describe a new genus and species of inioid, Samaydelphis chacaltanae. Bearing a proportionally short rostrum with an upper tooth count of about 30 teeth per row, this small-sized species is characterized by a moderately elevated vertex of the cranium displaying a long anteromedial projection of the frontals and interparietal, as well as by the plesiomorphic retention of a premaxilla-nasal contact. Recovered as a member of the family Pontoporiidae in our phylogenetic analysis, S. chacaltanae falls as sister-group to Meherrinia isoni, from the late Miocene of North Carolina (U.S.A.), which has previously been tentatively referred to the Iniidae or regarded as a stem Inioidea. Originating from the P1 allomember of the Pisco Formation, the mesorostrine S. chacaltanae was contemporaneous and sympatric with two other inioids, the brevirostrine pontoporiid Brachydelphis mazeasi and the longirostrine iniid Brujadelphis ankylorostris.
Genome sequencing of four culinary herbs reveals terpenoid genes underlying chemodiversity in the Nepetoideae
<p>Species within the mint family, Lamiaceae, are widely used for their culinary, cultural, and medicinal properties due to production of a wide variety of specialized metabolites, especially terpenoids. To further our understanding of genome diversity in the Lamiaceae and to provide a resource for mining biochemical pathways, we generated high-quality genome assemblies of four economically important culinary herbs, namely, sweet basil (<i>Ocimum basilicum </i>L<i>.</i>), sweet marjoram (<i>Origanum majorana </i>L.), oregano (<i>Origanum vulgare </i>L<i>.</i>), and rosemary (<i>Rosmarinus officinalis </i>L<i>.</i>), and characterized their terpenoid diversity through metabolite profiling and genomic analyses. A total 25 monoterpenes and 11 sesquiterpenes were identified in leaf tissue from the four species. Genes encoding enzymes responsible for the biosynthesis of precursors for mono- and sesqui-terpene synthases were identified in all four species. Across all four species, a total of 235 terpene synthases were identified, ranging from 27 in <i>O. majorana</i> to 137 in the tetraploid <i>O. basilicum</i>. This study provides valuable resources for further investigation of the genetic basis of chemodiversity in these important culinary herbs.</p>
Biomass allocation and productivity–richness relationship across four grassland types at the Qinghai Plateau
<p>Aboveground biomass (AGB) and belowground biomass (BGB) allocation and productivity–richness relationship are controversial. Here, we assessed AGB and BGB allocation and the productivity–richness relationship at community level across four grassland types based on the biomass data collected from 80 sites across the Qinghai Plateau during 2011–2012. The reduced major axis regression and general linear models were used and showed that (1) the median values of AGB were significantly higher in alpine meadow than in other three grassland types; the ratio of root to shoot (R/S) was significantly higher in desert grassland (36.06) than intemperate grassland (16.60), alpine meadow (13.35) and meadow steppe (19.46). The temperate grassland had deeper root distribution than the other three grasslands, with about 91.45% roots distributed in the top 30 cm soil layer. (2) The slopes between log AGB and log BGB in the temperate grassland and meadow steppe were 1.09 and 1, respectively, whereas that in the desert grassland was 1.12, which was significantly different from the isometric allocation relationship. A competitive relationship between AGB and BGB was observed in the alpine meadow with a slope of −1.83, indicating a trade-off between AGB and BGB in the alpine meadow. (3) A positive productivity–richness relationship existed across the four grassland types, suggesting that the positive productivity–richness relationship might not be affected by the environmental factors at the plant location. Our results provide a new insight for biomass allocation and biodiversity–ecosystem functioning research.</p>
Data from: Late Quaternary environmental and human impacts on the mitochondrial DNA diversity of four commensal rodents in Myanmar
<p>We addressed the spatiotemporal characteristics of four commensal rodent species occurring in Myanmar in comparison with other areas of the Indo-Malayan region. We examined sequence variations of the mitochondrial cytochrome <i>b</i>gene (<i>Cytb</i>) in the Pacific rat (<i>Rattus exulans</i>), roof rat(<i>Rattus rattus</i>complex, RrC), lesser bandicoot rat (<i>Bandicota bengalensis</i>), and house mouse(<i>Mus musculus</i>) using the recently developed time-dependent evolutionary rates of mtDNA. The <i>Cytb</i>sequences of RrC from Myanmar were shown to belong to RrC Lineage II, and their level of genetic diversity was relatively high compared to those of the other three species. RrC was found to have experienced bottleneck and rapid expansion events at least twice in the late Pleistocene period in Myanmar and a nearby region. Accordingly, paleoclimatic environmental fluctuations were shown to be an important factor affecting rodents in the subtropics of the Indo-Malayan region. Our results show that human activities during the last 10,000 years of the Holocene period affected the population dynamics of the rodent species examined, including introducing them to Myanmar from neighboring countries. Further study of these four commensal rodents in other geographic areas of the Indo-Malayan region would allow us to better understand the factors that drove their evolution and their ecological trends.</p>
................................................................................................................................................. Fig. 3. SDSPAGE analysis of total bacterial protein extracts of the four roe deer isolates as well as other Bartonella species. Extracts of total bacterial protein were separated by SDSPAGE and stained with Coomassie brilliant blue. Lanes: M, molecular mass markers; 1, R1T; 2, R3; 3, R4; 4, R6; 5, Bartonella henselae; 6, Bartonella quintana; 7, Bartonella bacilliformis; 8, Bartonella elizabethae; 9, Bartonella clarridgeiae; 10, Bartonella alsatica; 11, Bartonella tribocorum; 12, Bartonella grahamii. in Bartonella schoenbuchii sp. nov., isolated from the blood of wild roe deer.
................................................................................................................................................. Fig. 3. SDSPAGE analysis of total bacterial protein extracts of the four roe deer isolates as well as other Bartonella species. Extracts of total bacterial protein were separated by SDSPAGE and stained with Coomassie brilliant blue. Lanes: M, molecular mass markers; 1, R1T; 2, R3; 3, R4; 4, R6; 5, Bartonella henselae; 6, Bartonella quintana; 7, Bartonella bacilliformis; 8, Bartonella elizabethae; 9, Bartonella clarridgeiae; 10, Bartonella alsatica; 11, Bartonella tribocorum; 12, Bartonella grahamii.
FIGURE 8. Living specimens. A. Lamispina polycerata n in Four new deep-water flabelligerid species from Pacific Costa Rica (Annelida Sedentaria, Flabelligeridae)
FIGURE 8. Living specimens. A. Lamispina polycerata n. sp., holotype (SIO A9842), anterior fragment, left lateral view. B. Same, posterior fragment, dorsal view. C. Saphobranchia canela n. sp., holotype (SIO A1332), dorsal view. D. Same, ventral view. E. Same, anterior end, frontal view (Br: branchia, Pa: palp). F. S. ilys n. sp., holotype (SIO A 9605), dorsal view. G. Same, ventral view. H. S. omorpha n. sp., holotype (SIO A9595), dorsal view. I. Same, ventral view. Scale bars: A, B: 1.0 mm; C, D: 2.2 mm; E: 0.4 mm; F, G: 3.5 mm; H, I: 3.7 mm (Photos: Greg Rouse).
FIGURE 7. Saphobranchia omorpha n in Four new deep-water flabelligerid species from Pacific Costa Rica (Annelida Sedentaria, Flabelligeridae)
FIGURE 7. Saphobranchia omorpha n. sp., holotype (SIO A9595). A. Chaetiger 14, right parapodium, anterior view. B. Close up of parapodium. C. Central notochaetae, basal, medial and distal regions. D. Central neurochaetae, basal, medial and distal regions (inset: neurochaetal tip). Scale bars.- A: 0.36 mm, B: 0.21 mm, C: 35 μm, D: 65 μm.
FIGURE 6. Saphobranchia omorpha n in Four new deep-water flabelligerid species from Pacific Costa Rica (Annelida Sedentaria, Flabelligeridae)
FIGURE 6. Saphobranchia omorpha n. sp., holotype (SIO A9595). A. Dorsal view. B. Anterior region, dorsal view. C. Last chaetigers, dorsal view. D. Anterior region, ventral view. E. Last chaetiger, ventral view. Scale bars.- A: 1.5 mm, B: 0.90 mm, C: 0.60 mm, D: 0.95 mm, E: 0.52 mm.
FIGURE 4. Saphobranchia canela n in Four new deep-water flabelligerid species from Pacific Costa Rica (Annelida Sedentaria, Flabelligeridae)
FIGURE 4. Saphobranchia canela n. sp., holotype (SIO A1332). A. Dorsal view. B. Anterior end, oblique frontal view (BS: branchial scar, LL: lateral lip, NS: Nephridial lobe scar, PS: palp scar). C. Anterior region, ventral view. D. Chaetiger 14, right parapodium, posterior view. E. Same, notochaetal basal, medial and distal regions. F. Same, neurochaetal basal and distal regions (inset: neurochaetal tip). Scale bars.- A: 1.1 mm, B: 150 μm, C: 0.65 mm, D: 0.46 mm, E: 140 μm, F: 0.8 mm.
FIGURE 2. Lamispina polycerata n in Four new deep-water flabelligerid species from Pacific Costa Rica (Annelida Sedentaria, Flabelligeridae)
FIGURE 2. Lamispina polycerata n. sp., holotype (SIO A9842). A. Anterior fragment, left lateral view (anterior end to the left). B. Anterior end, dorsal view. C. Same, ventral view. Scale bars.- A: 0.38 mm, B–C: 0.47 mm.
FIGURE 3. Lamispina polycerata n in Four new deep-water flabelligerid species from Pacific Costa Rica (Annelida Sedentaria, Flabelligeridae)
FIGURE 3. Lamispina polycerata n. sp., holotype (SIO A9842). A. Anterior end, frontal view. B. Chaetiger 17, transverse section, posterior view. C. Right parapodium. Notochaetal basal, medial and distal regions. D. Left parapodium, neurochaetae. E. Posterior fragment, dorsal view. Scale bars.- A: 0.15 mm, B: 0.56 mm, C: 0.20 mm, D: 0.25 mm, E: 1.25 mm.
FIGURES 62–66 in New species and records of Paraphloeostiba Steel, 1960 from China and Laos and descriptions of four new species of related genera (Coleoptera: Staphylinidae Omaliinae: Omaliini)
FIGURES 62–66. Abdominal segments of Phloeostiba assingi: 62—male tergite VIII (dorsal view), 63—male sternite VIII (ventral view), 64—female tergite VIII (dorsal view), 65—female sternite VIII (ventral view), 66—female accessory sclerite. Scale bar: 0.1 mm.
FIGURES 39–42 in New species and records of Paraphloeostiba Steel, 1960 from China and Laos and descriptions of four new species of related genera (Coleoptera: Staphylinidae Omaliinae: Omaliini)
FIGURES 39–42. Aedeagus (Figs. 39–40) and abdominal segments (Figs. 41–42) of Nipponophloeostiba longilobata: 39—aedeagus, parameral view, 40—aedeagus, lateral view, 41—male tergite VIII (dorsal view), 42—male sternite VIII (ventral view). Scale bar: 0.1 mm.
FIGURES 31–35 in New species and records of Paraphloeostiba Steel, 1960 from China and Laos and descriptions of four new species of related genera (Coleoptera: Staphylinidae Omaliinae: Omaliini)
FIGURES 31–35. Abdominal segments of Paraphloeostiba opacicollis: 31—male tergite VIII (dorsal view), 32—male sternite VIII (ventral view), 33—female tergite VIII (dorsal view), 34—female sternite VIII (ventral view), 35—female accessory sclerite. Scale bar: 0.1 mm.
FIGURES 60–61 in New species and records of Paraphloeostiba Steel, 1960 from China and Laos and descriptions of four new species of related genera (Coleoptera: Staphylinidae Omaliinae: Omaliini)
FIGURES 60–61. Aedeagus of Phloeostiba assingi (paratype): 60—parameral view, 61—lateral view. Scale bar: 0.1 mm.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.