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Figures 4-15 from: Cardoso Cláudio V, Barbosa GP, Rassy FB, Rocha VJ, Moratelli R (2020) The bat fauna (Mammalia: Chiroptera) of Carlos Botelho State Park, Atlantic Forest of Southeastern Brazil, including new distribution records for the state of São Paulo. Zoologia 37: 1-32. https://doi.org/10.3897/zoologia.37.e36514
Figures 4-15 Bat species captured in Carlos Botelho State Park, São Paulo state, Brazil: (4) Lampronycteris brachyotis; (5) Micronycterismicrotis; (6) Micronycteris schmidtorum; (7) Desmodus rotundus; (8) Diphylla ecaudata; (9) Mimon bennettii; (10) Trachops cirrhosus; (11) Anoura caudifer; (12) Anoura geoffroyi; (13) Glossophaga soricina; (14) Carollia perspicillata; (15) Glyphonycteris sylvestris.
Figure 31 from: Cardoso Cláudio V, Barbosa GP, Rassy FB, Rocha VJ, Moratelli R (2020) The bat fauna (Mammalia: Chiroptera) of Carlos Botelho State Park, Atlantic Forest of Southeastern Brazil, including new distribution records for the state of São Paulo. Zoologia 37: 1-32. https://doi.org/10.3897/zoologia.37.e36514
Figure 31 Distribution records of Molossus currentium in Brazil. Black circle: previous occurrence record; black star: new record from the state of São Paulo. The numbers correspond to the records as indicated in the Table 9.
Figures 32-41 from: Cardoso Cláudio V, Barbosa GP, Rassy FB, Rocha VJ, Moratelli R (2020) The bat fauna (Mammalia: Chiroptera) of Carlos Botelho State Park, Atlantic Forest of Southeastern Brazil, including new distribution records for the state of São Paulo. Zoologia 37: 1-32. https://doi.org/10.3897/zoologia.37.e36514
Figures 32-41 Bat species captured in Carlos Botelho State Park, São Paulo state, Brazil: (32) Molossus currentium; (33) Molossus molossus; (34) Molossus rufus; (35) Eptesicus taddeii; (36) Lasiurus ebenus; (37) Histiotus velatus; (38) Myotis albescens; (39) Myotis nigricans; (40) Myotis riparius; (41) Myotis ruber.
Figures 42-43 from: Cardoso Cláudio V, Barbosa GP, Rassy FB, Rocha VJ, Moratelli R (2020) The bat fauna (Mammalia: Chiroptera) of Carlos Botelho State Park, Atlantic Forest of Southeastern Brazil, including new distribution records for the state of São Paulo. Zoologia 37: 1-32. https://doi.org/10.3897/zoologia.37.e36514
Figures 42-43 Dorsal fur of specimens of Myotis captured in the Carlos Botelho State Park, São Paulo, Brazil: (42) Myotis nigricans, with almost unicolored and long dorsal fur (ca 7 mm); (43) Myotis riparius, with slightly bicolored and short dorsal fur (ca 5 mm).
Figure 17 from: Cardoso Cláudio V, Barbosa GP, Rassy FB, Rocha VJ, Moratelli R (2020) The bat fauna (Mammalia: Chiroptera) of Carlos Botelho State Park, Atlantic Forest of Southeastern Brazil, including new distribution records for the state of São Paulo. Zoologia 37: 1-32. https://doi.org/10.3897/zoologia.37.e36514
Figure 17 Tetracolored banding pattern on the dorsal fur of a specimen of Carollia perspicillata captured in the Carlos Botelho State Park, São Paulo, Brazil.
Figure 1 from: Cardoso Cláudio V, Barbosa GP, Rassy FB, Rocha VJ, Moratelli R (2020) The bat fauna (Mammalia: Chiroptera) of Carlos Botelho State Park, Atlantic Forest of Southeastern Brazil, including new distribution records for the state of São Paulo. Zoologia 37: 1-32. https://doi.org/10.3897/zoologia.37.e36514
Figure 1 Sampling sites and location of the Carlos Botelho State Park in the São Paulo state, southeastern Brazil. Code numbers correspond to sampling sites indicated in the Appendix 1. M: mist-net sites; S: search for roosts sites.
Figure 5 from: Mehrotra R, Caballer Gutierrez M, Scott CM, Arnold S, Monchanin C, Chavanich S (2020) On the Plakobranchidae (Gastropoda, Sacoglossa) from soft sediment habitats of Koh Tao, Gulf of Thailand, with descriptions of two new species. ZooKeys 969: 85-121. https://doi.org/10.3897/zookeys.969.52941
Figure 5 Living specimens of Plakobranchus papua from Koh Tao A close-up of head, 28 mm specimen B dorsal view, 30 mm (photograph by Pau Urgell Plaza) C dorsolateral view of sequenced specimen, 27 mm.
Figure 2 from: Mehrotra R, Caballer Gutierrez M, Scott CM, Arnold S, Monchanin C, Chavanich S (2020) On the Plakobranchidae (Gastropoda, Sacoglossa) from soft sediment habitats of Koh Tao, Gulf of Thailand, with descriptions of two new species. ZooKeys 969: 85-121. https://doi.org/10.3897/zookeys.969.52941
Figure 2 Phylogenetic hypothesis for the Elysia japonica complex based on COI sequences. Sequences obtained in this study in bold. Bootstrap values from ML shown above branches and PP values from BI below branches. Tree rooted to Costasiella coronata (not shown).
Figure 1 from: Mehrotra R, Caballer Gutierrez M, Scott CM, Arnold S, Monchanin C, Chavanich S (2020) On the Plakobranchidae (Gastropoda, Sacoglossa) from soft sediment habitats of Koh Tao, Gulf of Thailand, with descriptions of two new species. ZooKeys 969: 85-121. https://doi.org/10.3897/zookeys.969.52941
Figure 1 Phylogenetic hypothesis of Plakobranchus based on COI sequences. Bootstrap values from ML shown above branch and posterior probability (PP) values below branch. Sequences obtained in this study in bold. Missing PP values, or those that support branch placements that deviate from the ML tree are denoted with an asterisk * and are due to the discrepancy between ML and BI topologies (see Suppl. material 1). Tree rooted to Costasiella coronata (not shown).
Figure 8 from: Mehrotra R, Caballer Gutierrez M, Scott CM, Arnold S, Monchanin C, Chavanich S (2020) On the Plakobranchidae (Gastropoda, Sacoglossa) from soft sediment habitats of Koh Tao, Gulf of Thailand, with descriptions of two new species. ZooKeys 969: 85-121. https://doi.org/10.3897/zookeys.969.52941
Figure 8 Illustrations and images of specimens belong to the Elysia japonica complex A–E illustrations taken from the original descriptions of species belonging to the Elysia japonica complex A, DElysia abei Baba, 1955 BElysia amakusana Baba, 1955 CElysia furvacauda Burn, 1958 E illustration of radula of Elysia japonica Eliot, 1913 by Baba (1949)F–JElysia aowthai sp. nov. showing variation in colouration, 12 mm (F), 9 mm (G), 11 mm (H, I), 8 mm (J).
Figure 4 from: Mehrotra R, Caballer Gutierrez M, Scott CM, Arnold S, Monchanin C, Chavanich S (2020) On the Plakobranchidae (Gastropoda, Sacoglossa) from soft sediment habitats of Koh Tao, Gulf of Thailand, with descriptions of two new species. ZooKeys 969: 85-121. https://doi.org/10.3897/zookeys.969.52941
Figure 4 Living specimens of Plakobranchus ocellatus from Koh Tao. A, B close-up of head with retracted rhinophores and dorsolateral view, 25 mm C sequenced specimen, 32 mm.
Figure 11 from: Mehrotra R, Caballer Gutierrez M, Scott CM, Arnold S, Monchanin C, Chavanich S (2020) On the Plakobranchidae (Gastropoda, Sacoglossa) from soft sediment habitats of Koh Tao, Gulf of Thailand, with descriptions of two new species. ZooKeys 969: 85-121. https://doi.org/10.3897/zookeys.969.52941
Figure 11 Genitalia and reproductive system of Elysia aowthai sp. nov., Koh Tao, Thailand, 15 mm alive. Abbreviations: ag – to the albumen gland; bc – bursa copulatrix; f – to the follicles; mg – mucus gland; p – penis; pr – to the prostate; v – vagina; vd – vas deferens; vo – vaginal opening.
Figure 3 from: Mehrotra R, Caballer Gutierrez M, Scott CM, Arnold S, Monchanin C, Chavanich S (2020) On the Plakobranchidae (Gastropoda, Sacoglossa) from soft sediment habitats of Koh Tao, Gulf of Thailand, with descriptions of two new species. ZooKeys 969: 85-121. https://doi.org/10.3897/zookeys.969.52941
Figure 3 Phylogenetic hypotheses of Plakobranchidae based on concatenated sequences of COI, 16S, and H3 regions. Sequences obtained in this study in bold. Bootstrap values from ML topology (left) aligned with PP values from BI topology (right).
Figure 10 from: Mehrotra R, Caballer Gutierrez M, Scott CM, Arnold S, Monchanin C, Chavanich S (2020) On the Plakobranchidae (Gastropoda, Sacoglossa) from soft sediment habitats of Koh Tao, Gulf of Thailand, with descriptions of two new species. ZooKeys 969: 85-121. https://doi.org/10.3897/zookeys.969.52941
Figure 10 SEM images of radulae of Elysia aowthai sp. nov. and Plakobranchus noctisstellatus sp. nov. A–CElysia aowthai sp. nov., Koh Tao, Thailand, 15 mm alive A general view of the radula without the ascus B active teeth from the radula with smooth cutting edge C sixth teeth of the descending series with denticulated cutting edge D–FPlakobranchus noctisstellatus sp. nov. Koh Tao, Thailand, 21 mm alive D general view of the radula without the ascus E lateral view of the descending series F detail of the cutting edge of a tooth.
Figure 7 from: Mehrotra R, Caballer Gutierrez M, Scott CM, Arnold S, Monchanin C, Chavanich S (2020) On the Plakobranchidae (Gastropoda, Sacoglossa) from soft sediment habitats of Koh Tao, Gulf of Thailand, with descriptions of two new species. ZooKeys 969: 85-121. https://doi.org/10.3897/zookeys.969.52941
Figure 7 Plakobranchus noctisstellatus sp. nov. A dorsal view of the animal B ventral view of the animal, C detail of the eye D last teeth of the ascending series and active teeth E teeth in the ascus F reproductive system. Abbreviations: am – ampulla; bc – bursa copulatrix; hd – hermaphrodite duct; mg – mucus gland; ot – ovotestis, p – penis; s – stylet; vd – vas deferens.
Figure 9 from: Mehrotra R, Caballer Gutierrez M, Scott CM, Arnold S, Monchanin C, Chavanich S (2020) On the Plakobranchidae (Gastropoda, Sacoglossa) from soft sediment habitats of Koh Tao, Gulf of Thailand, with descriptions of two new species. ZooKeys 969: 85-121. https://doi.org/10.3897/zookeys.969.52941
Figure 9 Elysia aowthai sp. nov., Koh Tao Thailand A–F 16 mm alive A right side view, the black dot at the end of the parapodia represents the vaginal opening B dorsal view, the shaded area probably being the same as that mentioned by Eliot (1913: 47) C ventral view with a detail of the head D detail of the eyes E buccal bulb F last teeth of the ascending series and active teeth G, H 10 mm alive G ascus H last teeth of the ascending series and active teeth.
Figure 6 from: Mehrotra R, Caballer Gutierrez M, Scott CM, Arnold S, Monchanin C, Chavanich S (2020) On the Plakobranchidae (Gastropoda, Sacoglossa) from soft sediment habitats of Koh Tao, Gulf of Thailand, with descriptions of two new species. ZooKeys 969: 85-121. https://doi.org/10.3897/zookeys.969.52941
Figure 6 Living specimens of Plakobranchus noctisstellatus sp. nov. from Koh Tao. A 21 mm (photograph by Pau Urgell Plaza) B 15 mm C, D (paratype) 31 mm.
Supplementary material 2 from: Huang J, Guo Z, Tang S, Ren W, Chu G, Wang L, Zhao L, Yu R, Xu Y, Ding Y, Zang R (2020) Floristic composition and plant diversity in distribution areas of native species congeneric with Betula halophila in Xinjiang, northwest China. Nature Conservation 42: 1-17. https://doi.org/10.3897/natureconservation.42.54735
Figure S2. The distribution frequency of Betula species varies with the environment gradients
Raw in vitro screening data and R scripts for: A Bayesian method for population-wide cardiotoxicity hazard and risk characterization using an in vitro human model
<p>Human induced pluripotent stem cell (iPSC)-derived cardiomyocytes are an established model for testing potential chemical hazards. Inter-individual variability in toxicodynamic sensitivity has also been demonstrated <i>in vitro</i>; however, quantitative characterization of the population-wide variability has not been fully explored. We sought to develop a method to address this gap by combining a population-based iPSC-derived cardiomyocyte model with Bayesian concentration-response modeling. A total of 136 compounds, including 44 pharmaceuticals and 82 environmental chemicals, were tested in iPSC-derived cardiomyocytes from 43 non-diseased humans. Hierarchical Bayesian population concentration-response modeling was conducted for five phenotypes reflecting cardiomyocyte function or viability. Toxicodynamic variability was quantified through the derivation of chemical- and phenotype-specific variability factors (TDVF). Toxicokinetic modeling was used for probabilistic <i>in vitro</i>-to-<i>in vivo </i>extrapolation in order to derive population-wide margins of safety (MOS) for pharmaceuticals and margins of exposure (MOE) for environmental chemicals. Pharmaceuticals were found to be active across all phenotypes. Over half of tested environmental chemicals showed activity in at least one phenotype, most commonly positive chronotropy. TDVF estimates for the functional phenotypes were greater than those for cell viability, usually exceeding the generally-assumed default of ~3. Population variability-based MOS for pharmaceuticals were correctly predicted to be relatively narrow, between 10-100; however, MOE for environmental chemicals, based on population exposure estimates, generally exceeded 1000, suggesting they pose little risk at general population exposures even to sensitive sub populations. This study represents a first of its kind human <i>in vitro</i> model that can be used to characterize toxicodynamic population variability in cardiotoxic risk.</p>
Figure 2 from: Balzan MV, Tomaskinova J, Collier MJ, Dicks L, Geneletti D, Grace M, Longato D, Sadula R, Stoev P, Sapundzhieva A (2020) Building capacity for mainstreaming nature-based solutions into environmental policy and landscape planning. Research Ideas and Outcomes 6: e58970. https://doi.org/10.3897/rio.6.e58970
Figure 2 (a) Assessing the relationship between green infrastructure cover (GI) in each local council and average ES capacity and (b) population density (Adapted from: Balzan 2017).
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.