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Figure 4 in Hybridization in the evolution of animal form and life-cycle
Figure 4. Enteropneust and pterobranch hemichordates and a planctosphere. A–E, enteropneusta: A, adult Dolichoglossus, B, tornaria larva; C–E, stages in metamorphosis; F, G, Pterobranchia: F, adult Rhabdopleara; G, pterobranch larva. H, Planctosphaeromorpha: adult Planctoshaera pelagica. Scale bar = ∼10 mm (A), ∼1 mm (B–E, G), ∼5 mm (F, H). (Adapted from Borradaile et al., 1935; Hyman, 1959.)
Figure 3. Bryozoan larvae and adult. A in Hybridization in the evolution of animal form and life-cycle
Figure 3. Bryozoan larvae and adult. A, trochophore larva of Alcyonidium; B, cyphonautes larva of Membranipora; C, adult zooid of Electra. (After Williamson, 1992.)
Figure 2 in Hybridization in the evolution of animal form and life-cycle
Figure 2. Examples of overlapping metamorphosis. A, Luidia sarsi (Echinodermata): swimming bipinnaria larva and detached juvenile starfish; B, Polygordius sp. (Annelida): two stages showing segmented polychaete worm protruding from swimming trochophore larva; C, Cerebratulus sp. (Nemertea): juvenile nemertean worm within swimming pilidium larva; D, Doliolum mulleri (Urochordata): juvenile doliolid tunicate within cuticle of tadpole larva. Juvenile stippled in each case. (A, C adapted from Williamson, 1992; B, D adapted from Borradaile et al., 1935.)
Figure 1 in Hybridization in the evolution of animal form and life-cycle
Figure 1. Hydroid and medusae of Hebella (Hydrozoa: Thecata). A, gonophores of H. parasitica; B, male and female medusae of H. parasitica; C, medusa of H. furax. (A, B adapted from Boero, 1980; C adapted from Migotto & de Andrade, 2000.)
Figure 10. A in Hybridization in the evolution of animal form and life-cycle
Figure 10. A phylogram of some metazoans, based on 18S rRNA. (From Williamson, 2002; after Michael Syvanen, unpubl. data)
Figure 8 in Hybridization in the evolution of animal form and life-cycle
Figure 8. Larvae of an enteropneust hemichordate and echinoderms. A, tornaria larva of an acorn-worm (Enteropneusta); B, auricularia larva of a sea-cucumber (Holothuromorpha); C, bipinnaria larva of a starfish (Asteromorpha); D, echinopluteus larva of a sea-urchin (Echinomorpha); E, ophiopluteus larva of a brittle-star (Ophiuromorpha); F, doliolaria larva of a sea-lily (Crinomorpha). Scale bar = ∼1 mm (Adapted from Williamson, 1992, 2003.)
Figure 57. Live animals. A in A taxonomic revision of Paradoris sea slugs (Mollusca, Gastropoda, Nudibranchia, Doridina)
Figure 57. Live animals. A, sp. A, CASIZ 099299 (#1 or #2) or CASIZ 165833, total length (preserved) = 20 (#1), 17 (#2), or 16 (165833) mm. B, same as (A). C, sp. B, CASIZ 089053, total length (preserved) = 6 mm. D, sp. B, CASIZ 105261, total length (alive) = 12 mm. E, sp. B, CASIZ 099080, total length (alive) = 12 mm. F, sp. C, CASIZ 110387, total length (preserved) = 5 mm. Colour pictures by T.M. Gosliner (A, B), R. Bolland (C–E), and C. Carlson (F).
Figure 8. Animal and mantle pigmentation. A in Systematic revision of the genus Everettia Godwin-Austen, 1891 (Mollusca: Gastropoda: Dyakiidae) in Sabah, northern Borneo
Figure 8. Animal and mantle pigmentation. A, Everettia subconsul west coast lowland; B, Everettia layanglayang sp. nov.; C, Everettia monticola sp. nov.; D, Everettia safriei sp. nov.; E, Everettia interior sp. nov.; F, Everettia subconsul east coast lowland; G, Everettia corrugata corrugata; H, Everettia jucundior sp. nov.; I, Everettia klemmantanica; J, Everettia lapidini sp. nov.
Figure 4. Animal head and body pigmentation. A in Systematic revision of the genus Everettia Godwin-Austen, 1891 (Mollusca: Gastropoda: Dyakiidae) in Sabah, northern Borneo
Figure 4. Animal head and body pigmentation. A, Everettia klemmantanica; B, Everettia interior sp. nov.; C, Everettia jucunda; D, Everettia themis; E, Everettia layanglayang sp. nov.; F, Everettia subconsul; G–I, possible hybrid of E. themis and E. subconsul.
Figure 11. Live animals. A in On the confusion surrounding Pareledone charcoti (Joubin, 1905) (Cephalopoda: Octopodidae): endemic radiation in the Southern Ocean
Figure 11. Live animals. A, Pareledone charcoti Joubin, 1905, NMSZ 2002037.044. B, P. aequipapillae sp. nov., NMSZ 2002037.004. C, P. albimaculata sp. nov., NMSZ 2002037.011. D, P. aurata sp. nov., NMSZ 2002037.003. E, P. cornuta sp. nov., NMSZ 2002037.018. F, P. panchroma sp. nov., NMSZ 2000081.051. G, P. serperastrata sp. nov., NMSZ 2002037.022. H, P. subtilis sp. nov., NMSZ 2002037.027.
Supplementary Material for "Enhancing Fluid Animation with Fine Detail"
<p>Results for an upcoming publication. Work is based on the 3 referenced papers. </p> <p>VideoAppendix1 relates to: </p> <p>D. Morgenroth, D. Weiskopf, and B. Eberhardt, “Distributed vfx architecture for sph simulation,”Journal of WSCG, vol.21, no.3, pp.163-171, 2013, eprint:http://hdl.handle.net/11025/6986.</p> <p>VIdeoAppendix2 relates to:</p> <p>D. Morgenroth, D. Weiskopf, and B. Eberhardt, “Direct raytracing of a closed-form fluid meniscus,” The Visual Computer, vol.32, no.6-8,pp.791-800, 2016. doi:10.1007/s00371-016-1258-4.</p> <p>VideoAppendix3 relates to:</p> <p>D. Morgenroth, S. Reinhardt, D. Weiskopf, and B. Eberhardt, “Efficient 2d simulation on moving 3d surfaces,”Computer Graphics Forum, vol. 39, no.8, pp.27-38,2020.doi:10.1111/cgf.14098.</p> <p>More detailed description of the visuals can be found in the readme file.</p>
Animated E3SM V1 High Resolution Labrador Sea Ice Thickness and Concentration with mid-20th Century Atmospheric Constituents
<p>This animated GIF file visualizes daily grid-cell mean sea ice thickness and concentration for the Labrador Sea region from version 1 of the Energy Exascale Earth System Model (E3SM) using 25km Atmosphere/Land and 8-16km Sea Ice-Ocean resolutions as described in the manuscript "The DOE E3SM coupled model version 1: Description 1 and results at high resolution". River routing is resolved at 0.125˚. This fully coupled simulation was spun-up for 6 years, and then proceeded for 50 subsequent years using HighResMIP protocols for continuuous 1950s atmospheric constituents. This animation shows sea thickness evolution in each frame for five model years 46 to 50, inclusive, with rendered transparency determined from sea ice concentration to demonstrate the influence of ocean eddies around the southern tip of Greenland. The coastline is the true model boundary. The animation is best viewed using a web browser.</p>
Animated E3SM V1 High Resolution Full Coupled Sea Ice Thickness and Extent with mid-20th Century Atmospheric Constituents
<p>This animated GIF file visualizes daily grid-cell mean sea ice thickness from version 1 of the Energy Exascale Earth System Model (E3SM) using 25km Atmosphere/Land and 8-16km Sea Ice-Ocean resolutions as described in the manuscript "The DOE E3SM coupled mo del version 1: Description 1 and results at high resolution". River routing is resolved at 0.125˚. This fully coupled simulation was spun-up for 6 years, and then proceeded for 50 subsequent years using HighResMIP protocols for continuuous 1950s atmospheric constituents. The animation shows both pan-Arctic and Southern Ocean daily sea thickness evolution in each frame for model years 46 to 55, truncated at 15% sea ice concentration, and is best viewed from within a web browser.</p>
Animated E3SM V1 High Resolution Mertz Polynya Sea Ice Thickness and Concentration with mid-20th Century Atmospheric Constituents
<p>This animated GIF file visualizes daily grid-cell mean sea ice thickness and concentration for the Mertz Glacier Polynya region of the East Antarctic coast from version 1 of the Energy Exascale Earth System Model (E3SM) using 25km Atmosphere/Land and 8-16km Sea Ice-Ocean resolutions as described in the manuscript "The DOE E3SM coupled model version 1: Description 1 and results at high resolution". River routing is resolved at 0.125˚. This fully coupled simulation was spun-up for 6 years, and then proceeded for 50 subsequent years using HighResMIP protocols for continuuous 1950s atmospheric constituents. This animation shows sea thickness evolution in each frame for ten model years 46 to 55, inclusive, with shading transparency determined by sea ice concentration, and grid cell outlines dissappearing where there is less than 0.1% sea ice concentration. The coastline is the true model boundary. This animation is best viewed using a web browser.</p>
Dihydrosphingolipids are associated with steatosis and increased fibrosis damage in human and animal models of non-alcoholic fatty liver disease
<p>Data sets used for the article entitled: "Accumulation of dihydrosphingolipids and neutral lipids is related to steatosis and fibrosis damage in human and animal models of non-alcoholic fatty liver disease"</p> <p>- Patient data: DATA Patients JLR.xlsx</p> <p>- Mouse data: DATA Mice.xlsx</p>
Animal Re-Identification from Video
<p>Repository of annotated videos, images and extracted features of multiple animals</p> <p> </p> <p><strong>1. Videos</strong></p> <p>The videos are available in the file "videos.zip".</p> <p>The original videos included in this repository have been sourced from <a href="https://pixabay.com/">Pixabay</a> under Pixabay License</p> <ul> <li>Free for commercial use</li> <li>No attribution required</li> </ul> <p>The video data is summarised below:</p> <table> <thead> <tr> <th><em>Short Name</em></th> <th><em>Video Name</em></th> <th><em># Frames</em></th> <th><em>Size</em></th> <th><em># Bounding boxes</em></th> <th><em># Identities</em></th> </tr> </thead> <tbody> <tr> <td>Pigs</td> <td>Pigs_49651_960_540_500f.mp4</td> <td>500</td> <td>( 960, 540)</td> <td>6184</td> <td>26</td> </tr> <tr> <td>Koi fish</td> <td>Koi_5652_952_540.mp4</td> <td>536</td> <td>( 952, 540)</td> <td>1635</td> <td>9</td> </tr> <tr> <td>Pigeons (curb)</td> <td>Pigeons_8234_1280_720.mp4</td> <td>443</td> <td>(1280, 720)</td> <td>4700</td> <td>16</td> </tr> <tr> <td>Pigeons (ground)</td> <td>Pigeons_4927_960_540_600f.mp4</td> <td>600</td> <td>( 960, 540)</td> <td>3079</td> <td>17</td> </tr> <tr> <td>Pigeons (square)</td> <td>Pigeons_29033_960_540_300f.mp4</td> <td>300</td> <td>( 960, 540)</td> <td>4892</td> <td>28</td> </tr> </tbody> </table> <p> </p> <p><strong>2. Annotated videos</strong></p> <p>The annotated videos are available in the file "annotated_videos.zip":</p> <ul> <li>Annotated_Pigs_49651_960_540_500f.mp4. Annotation contributed by <a href="https://github.com/LucyKuncheva/Animal-Identification-from-Video/blob/main/mas00a@bangor.ac.uk">Lucy Kuncheva</a></li> <li>Annotated_Koi_5652_952_540.mp4. Annotation contributed by <a href="https://github.com/LucyKuncheva/Animal-Identification-from-Video/blob/main/mas00a@bangor.ac.uk">Lucy Kuncheva</a></li> <li>Annotated_Pigeons_8234_1270_720.mp4. Annotation contributed by <a href="https://github.com/LucyKuncheva/Animal-Identification-from-Video/blob/main/wll19pkk@bangor.ac.uk">Wilf Langdon</a></li> <li>Annotated_Pigeons_4927_960_540_600f.mp4. Annotation contributed by <a href="https://github.com/LucyKuncheva/Animal-Identification-from-Video/blob/main/eeub05@bangor.ac.uk">Frank Krzyzowski</a></li> <li>Annotated_Pigeons_29033_960_540_300f.mp4. Annotation contributed by <a href="https://github.com/LucyKuncheva/Animal-Identification-from-Video/blob/main/wnw19njx@bangor.ac.uk">Owen West</a></li> </ul> <p> </p> <p><strong>3. Images</strong></p> <p>The individual images are in the file "images.zip".</p> <p>For each video, all the images are in the corresponding folder. Inside, there is a folder for each individual with all the images. The filename of each image includes the frame number.</p> <p> </p> <p><strong>4. Frames information</strong></p> <p>The correspondence between images and frames in the videos are in the file "frames.zip"</p> <p>The prefixes "h1_" and "h2_" denote, respectively, the first and second halves of the videos.</p> <p>The columns on these files are:</p> <ul> <li>x, y: coordinates in pixels of the top left corner of the bounding box.</li> <li>width, height: of the bounding box in pixels.</li> <li>frame: frame number.</li> <li>max_w, max_h.</li> <li>label: the label (class) number.</li> <li>image: file name.</li> </ul> <p> </p> <p><strong>5. Extracted features</strong></p> <p>Files with the extracted features are in "features.zip".</p> <p>The prefixes "h1_" and "h2_" denote, respectively, the data corresponding to the first and second halves of the videos.</p> <p>Five representations are used:</p> <ul> <li>"RGB" moments.</li> <li>"HOG": Histogram of Oriented Gradients</li> <li>"LBP": Local Binary Patterns.</li> <li>"AE": AutoEncoders.</li> <li>"MN2": extracted from a Keras MobileNetV2 model pre-trained on Imagenet</li> </ul> <p>The representation appears as a postfix in the file names.</p> <p>In each csv file, each image appears as a row. The feature values followed by the label (class) number.</p> <p> </p> <p><strong>6. Source code</strong></p> <p>Sample code (matlab & python) is available at <a href="https://github.com/admirable-ubu/animal-recognition">https://github.com/admirable-ubu/animal-recognition</a></p> <p> </p>
Fig. 9 in Ordovician opabiniid-like animals and the role of the proboscis in euarthropod head evolution
Fig. 9 | Details of posterior body and tail fan of Castle Bank euarthropod A (NMW.2021.3 G.8). cb-l leftcaudal blade, cb-r rightcaudalblade, df dorsalfurrow, fl lateral flap, sp spine.
Fig. 4 in Ordovician opabiniid-like animals and the role of the proboscis in euarthropod head evolution
Fig. 4 | Details of anterior of Mieridduryn bonniae nov. gen. et sp. (NMW.2021.3 G.7) photographed using fluorescence. a Anterior of the head regionincludingproboscis,mouth, and gut. b Dorsalsclerite. c Mouthand anterior flaps with strengthening rays. d Proboscis with spines. ds dorsal sclerite, pr proboscis, sp spine, sr strengthening rays.
Fig. 7 in Ordovician opabiniid-like animals and the role of the proboscis in euarthropod head evolution
Fig. 7 | Details of anterior of Castle Bank euarthropod A (NMW.2021.3 G.8). a Anterior of head including lateral sclarites, rectangular elements and spinose proboscis with annulations (b) Details of spinose proboscis and annulations; an annulation, ic internal canal of proboscis, ls-l left lateral sclerite, ls-r right lateral sclerite,mr marginalrimtocarapace element,pr proboscis,rerectangular element posterior to lateral sclerites, sp spine.
Fig. 3 in Ordovician opabiniid-like animals and the role of the proboscis in euarthropod head evolution
Fig. 3 | Details of proboscis of Mieridduryn bonniae nov. gen. et sp. (NMW.2021.3 G.7) under different lighting conditions. a S8 microscope, cross-polarised light, stitched images, with contrast increased. b M125 microscope under high angle light. an annulation, sp spine.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.