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402 results for “MtDNA”
FIGURES 10–13 in COI mtDNA barcoding and morphology for species delimitation in the spider genus Ixchela Huber (Araneae: Pholcidae), with the description of two new species from Mexico
FIGURES 10–13. Ixchela panchovillai sp. nov. Female epigynum: 10, ventral view. 11, dorsal view. 12, frontal view. 13, lateral view. MSE: median septum of epigynum, PP: pore plates. Scale bars: 0.5 mm (Figs 12, 13), 1 mm (Figs 10, 11).
FIGURE 2 in COI mtDNA barcoding and morphology for species delimitation in the spider genus Ixchela Huber (Araneae: Pholcidae), with the description of two new species from Mexico
FIGURE 2. Maximum Likelihood gene tree (highest log: -3749.87), constructed with COI barcode sequences of Ixchela. Colors in the branches indicate species; same colors are in the bars, which represent the different species delimitation methods used for their validation. Red branches + blue circles indicate the new species. Numbers below the bars represent the species recovered in each species delimitation method (not considering the outgroup: P. dugesi): 1: morphology (M). 2: neighbor-joining (NJ). 3: GMYC. 4: ABGD with recursive partitions (RP). 5: ABGD with initial partitions (IP). 6: bPTP with IB. 7: bPTP with ML. Numbers above branches are Bootstrap support values (>50% significant), number below are posterior probabilities (PP) support values under BI.
FIGURE 1 in COI mtDNA barcoding and morphology for species delimitation in the spider genus Ixchela Huber (Araneae: Pholcidae), with the description of two new species from Mexico
FIGURE 1. Neighbour-Joining (NJ) with p-distances tree constructed with COI barcode sequences from different specimens and species of Ixchela. Colors in the branches indicate species, red branches + blue circles indicate the new species. Male cheliceral, male palps, and female epigyna are showed for each species to show morphological structures taxonomically important at species level. Number on branches represent Bootstrap support values (>50% significant).
FIGURE 31 in COI mtDNA barcoding and morphology for species delimitation in the spider genus Ixchela Huber (Araneae: Pholcidae), with the description of two new species from Mexico
FIGURE 31. Type localities of Ixchela panchovillai sp. nov. (green circle) and Ixchela zapatai sp. nov. (red circle), in the state of Oaxaca, Mexico.
List of specimens, species codes, localities (NI, Northern Iberia; CI, Central Iberia; SI, Southern Iberia; AU, Austria; BL, Bulgaria; CR, Croatia; CZ, Czech Republic; DK, Denmark; FR, France; GE, Germany; GR, Greece; HN, Hungary; SD, Sweden; SW, Switzerland; TK, Turkey), haplotypes codes for species and GenBank accession numbers of the samples used for an overall molecular screening of bat cryptic diversity in Iberia using a mtDNA cytb fragment in The Iberian contribution to cryptic diversity in European bats
List of specimens, species codes, localities (NI, Northern Iberia; CI, Central Iberia; SI, Southern Iberia; AU, Austria; BL, Bulgaria; CR, Croatia; CZ, Czech Republic; DK, Denmark; FR, France; GE, Germany; GR, Greece; HN, Hungary; SD, Sweden; SW, Switzerland; TK, Turkey), haplotypes codes for species and GenBank accession numbers of the samples used for an overall molecular screening of bat cryptic diversity in Iberia using a mtDNA cytb fragment
FIGURE 1 in Morphological and mtDNA data reveal broader distribution of Alburnoides holciki (Teleostei: Leuciscidae) in inland waters of Central Asia
FIGURE 1. Map of sampling sites of Alburnoides holciki in the Amu Darya basin (green circles 1 to 10), and records of A. holciki in the Hari River basin (red circles—11 and 12, based on Coad & Bogutskaya 2012).
Figure 14 in Species boundaries and phylogeographic patterns in new species of Nannoniscus (Janiroidea: Nannoniscidae) from the equatorial Pacific nodule province inferred from mtDNA and morphology
Figure 14. Nannoniscus magdae, holotype female (ZMH K-55375, Na26). Confocal laser scanning microscopy images: (A) habitus, dorsal view; (B) habitus, ventral view; (C) habitus, lateral view; (D) mouthparts, ventral view; (E) cephalothorax, lateral view; (F) Plt, ventral view. Scale bars: A–C = 200 µm; D–F = 100 µm.
Figure 18 in Species boundaries and phylogeographic patterns in new species of Nannoniscus (Janiroidea: Nannoniscidae) from the equatorial Pacific nodule province inferred from mtDNA and morphology
Figure 18. Nannoniscus menoti, holotype female (ZMH K-55354, Na27). Confocal laser scanning microscopy images: (A) habitus, dorsal view; (B) habitus, ventral view; (C) habitus, lateral view; (D) mouthparts, ventral view; (E) cephalothorax, lateral view; (F) Plt, ventral view. Scale bars: A–C = 200 µm; D–F = 100 µm.
Figure 22 in Species boundaries and phylogeographic patterns in new species of Nannoniscus (Janiroidea: Nannoniscidae) from the equatorial Pacific nodule province inferred from mtDNA and morphology
Figure 22. Nannoniscus pedro, holotype female (ZMH K-55358, Na08). Confocal laser scanning microscopy images: (A) habitus, dorsal view; (B) habitus, ventral view; (C) habitus, lateral view; (D) mouthparts, ventral view; (E) cephalothorax, lateral view; (F) Plt, ventral view. Scale bars: A–C = 200 µm; D–F = 100 µm.
Figure 15 in Species boundaries and phylogeographic patterns in new species of Nannoniscus (Janiroidea: Nannoniscidae) from the equatorial Pacific nodule province inferred from mtDNA and morphology
Figure 15. Nannoniscus menoti, (A–C, E–F, H–K) paratype female (ZMH K-55356, Na18); (D, G) holotype female (ZMH K-55354, Na27): (A) AII; (B) rMd; (C) lMd; (D) habitus, dorsal view; (E) MxII; (F) Mxp; (G) Plt and Op, ventral view; (H) PlpIII; (I) PlpIV; (J) PlpV; (K) Urp. Scale bars: A–C, E–F, H–K = 100 µm; D, G = 200 µm.
Figure 4 in Species boundaries and phylogeographic patterns in new species of Nannoniscus (Janiroidea: Nannoniscidae) from the equatorial Pacific nodule province inferred from mtDNA and morphology
Figure 4. Genetic divergence (p-distance) in relation to geographic distance in kilometres for N. menoti.
Figure 9 in Species boundaries and phylogeographic patterns in new species of Nannoniscus (Janiroidea: Nannoniscidae) from the equatorial Pacific nodule province inferred from mtDNA and morphology
Figure 9. Nannoniscus hilario, (A–B) holotype female (ZMH K-55342, Na23); (C–F) paratype female (ZMH K-55341, NB12_Iso020): (A) habitus, dorsal view; (B) habitus, lateral view; (C) PI; (D) PII; (E) PIV; (F) PV. Scale bars: A–B = 200 µm, C–F = 100 µm.
Figure 11 in Species boundaries and phylogeographic patterns in new species of Nannoniscus (Janiroidea: Nannoniscidae) from the equatorial Pacific nodule province inferred from mtDNA and morphology
Figure 11. Nannoniscus magdae, (A, C, E–G) paratype female (ZMH K-55373, NB12_Iso099); (B, D) holotype female (ZMH K-55375, Na26); (H–L) paratype female (ZMH K-55374, Na12): (A) AI; (B) habitus, dorsal view; (C) AII; (D) habitus, lateral view; (E) rMd; (F) lMd; (G) Mxp; (H) Op; (I) PlpIII; (J) PlpIV; (K) PlpV; (L) Urp. Scale bars: A, C, E–L = 100 µm; B, D = 200 µm.
Figure 7. A–C in Species boundaries and phylogeographic patterns in new species of Nannoniscus (Janiroidea: Nannoniscidae) from the equatorial Pacific nodule province inferred from mtDNA and morphology
Figure 7. A–C, Nannoniscus ovatus Menzies & George, 1972, allotype female (USNM 121022); (D–F) holotype male (USNM 121022); (G–I) N. perunis Menzies & George, 1972, holotype female (USNM 121017–121018): (A) habitus, dorsal view; (B) Plt and Op, lateral view; (C) Plt and Op, ventral view; (D) habitus, dorsal view; (E) Plt, lateral view; (F) Plt, ventral view incl. Urp.; (G) habitus, dorsal view; (H) Plt, ventral view; (I) Urp. Scale bars: A, G–I = 100 µm; B–F = 200 µm.
Fig. 2 in Phylogeny of Polycladida (Platyhelminthes) based on mtDNA data
Fig. 2 Maximum likelihood tree obtained from the combined dataset (16S + cox1). Posterior probability support values (> 0.9 pp) from the Bayesian inference analysis above nodes. Bootstrap support values (> 50%B) are below nodes. The coloured boxes highlight main groups
F in Revision and biogeographical analysis of the black-chinned tilapia Sarotherodon melanotheron (Teleostei, Cichlidae): results of morphometric, allozyme, globin chain and mtDNA studies
F. 3. Plot of factor 1 taken from a PCA on six meristic counts and factor 3 taken from a PCA on 18 log-transformed measurements including the 60 specimens from Congo- Brazzaville (Loeme and Kouilou) and Gabon (Santa Clara) and three syntypes of Tilapia dolloi Boulenger 1899.
Figure 1 in Taxonomy of family Plakinidae (Porifera: Homoscleromorpha) from eastern Pacific coral reefs, through morphology and cox1 and cob mtDNA data
Figure 1. Distribution and sample localities of Plakinidae species from the Mexican Pacific coast. Numbers refer to different species as follows: 1, Plakina muricyae sp. nov.; 2, Plakina paradilopha sp. nov.; 3, Plakortis clarionensis sp. nov.; 4, Plakortis albicans Cruz-Barraza & Carballo, 2005; 5, Plakinastrella clippertonensis van Soest et al., 2011.
Fig. 1 in Molecular phylogeny of the Eremias persica complex of the Iranian plateau (Reptilia: Lacertidae), based on mtDNA sequences
Fig. 1. Map of Iran and neighboring areas, showing the entire distribution range of the Eremias persica complex (bold line), and the localities from which the examined materials in this study were collected (circled numbers). The numbers refer to the samples indicated in the Appendix. Key:, Zagros Mountains; Δ, Elburz Mountains; ^, eastern mountain system; NL, Namak Lake (Salt Lake).
Mammalian RNase H1 directs RNA primer formation for mtDNA replication initiation and is also necessary for precise termination of mtDNA replication [RNA-seq]
GEO Series GSE199138. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Cells following mtDNA loss, or NAR1 repression
GEO Series GSE15302. Saccharomyces cerevisiae. 6 samples. Type: Expression profiling by array.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.