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871
datasets available to search
ShareScore release 0.7.1
Dataset results
871 results for “escherichia coli”
Dynamic Gene Network Analysis of Caco-2 Cell Response to Shiga Toxin-Producing Escherichia coli-Associated Hemolytic–Uremic Syndrome
GEO Series GSE104488. Homo sapiens. 25 samples. Type: Expression profiling by array.
Predictive Biophysical Neural Network Modeling of a Compendium of in vivo Transcription Factor DNA Binding Profiles for Escherichia coli
GEO Series GSE268698. Escherichia coli K-12; Escherichia coli str. K-12 substr. MG1655. 424 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Transcriptional Changes in Escherichia coli Upon Treatment with (-)-Roemerine
GEO Series GSE80827. Escherichia coli CFT073; Escherichia coli O157:H7 str. Sakai; Escherichia coli str. K-12 substr. MG1655; Escherichia coli; Escherichia coli O157:H7 str. EDL933. 13 samples. Type: Expression profiling by array.
Wild-type bone-marrow derived macrophages response to Escherichia coli lipopolysaccharide (LPS)
GEO Series GSE20207. Mus musculus. 6 samples. Type: Expression profiling by array.
PatE in transcriptional activation of acid-resistance pathways of enterohemorrhagic Escherichia coli strain EDL933
GEO Series GSE36922. Escherichia coli; Escherichia coli O157:H7 str. EDL933. 16 samples. Type: Expression profiling by array.
Decoding genome-wide GadEWX transcriptional regulatory networks reveals a multifaceted cellular response to acid stress in Escherichia coli [ChIP-seq]
GEO Series GSE66441. Escherichia coli str. K-12 substr. MG1655. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Characterization of probiotic Escherichia coli isolates using a novel pangenome microarray
GEO Series GSE8595. Escherichia coli. 10 samples. Type: Genome variation profiling by array.
Decoding genome-wide GadEWX transcriptional regulatory networks reveals a multifaceted cellular response to acid stress in Escherichia coli
GEO Series GSE66482. Escherichia coli str. K-12 substr. MG1655; Escherichia coli. 16 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Epigenetic-based regulation of transcriptome in Escherichia coli adaptive antibiotic resistance
GEO Series GSE228373. Escherichia coli. 4 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome RNA Sequencing Data Set of Differential Gene Expression in Escherichia Coli BW25113 SlyA Wild Type and Mutant Strains
GEO Series GSE168963. Escherichia coli. 16 samples. Type: Expression profiling by high throughput sequencing.
Determinants for efficient editing with Cas9-mediated recombineering in Escherichia coli
GEO Series GSE132139. Escherichia coli. 302 samples. Type: Genome variation profiling by high throughput sequencing.
Nascent elongating transcript sequencing (NET-seq) for Escherichia coli and Bacillus subtilis reveals a consensus pause sequence enriched at translation start sites.
GEO Series GSE56720. Bacillus subtilis; Escherichia coli. 8 samples. Type: Expression profiling by high throughput sequencing; Other.
Colon tissue of Il10-/- mice monoassociated with Escherichia coli NC101 or NC101-delta-pks
GEO Series GSE39095. Mus musculus. 8 samples. Type: Expression profiling by RT-PCR.
Cellular RNA Targets of Cold Shock Proteins CspC and CspE and Their Importance for Serum Resistance in Septicemic Escherichia coli
GEO Series GSE205384. Escherichia coli. 12 samples. Type: Other.
From the Gut to the Brain: Transcriptomic Insights into Neonatal Meningitis Escherichia coli Across Diverse Host Niches
GEO Series GSE291265. Escherichia coli. 15 samples. Type: Expression profiling by high throughput sequencing.
ChIP-chip from Escherichia coli CC72 cells with RNAP β’ subunit before and after osmotic stress.
GEO Series GSE110831. Escherichia coli str. K-12 substr. MG1655. 11 samples. Type: Genome binding/occupancy profiling by genome tiling array.
Transcriptomal changes of Escherichia coli TolC grown with the biofilm inhibitor Carolacton
GEO Series GSE93125. Escherichia coli. 14 samples. Type: Expression profiling by high throughput sequencing.
Escherichia coli Lrp regulates one-third of the genome via direct, cooperative, and indirect paths
GEO Series GSE111874. Escherichia coli. 108 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Valine-Induced Isoleucine Starvation in Escherichia coli K-12 Studied by Spike-In Normalized RNA Sequencing
GEO Series GSE136753. Escherichia coli K-12; Escherichia coli B. 12 samples. Type: Expression profiling by high throughput sequencing.
Colon tissue of Il10-/- mice monoassociated with Escherichia coli NC101 or Escherichia faecalis OG1RF (PAMM-077 array)
GEO Series GSE39092. Mus musculus. 12 samples. Type: Expression profiling by RT-PCR.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.