Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
537
datasets available to search
ShareScore release 0.9.0
Dataset results
537 results for “genome structure”
Single-cell three dimensional genome structures of rice egg, sperm, and unicellular zygote
GEO Series GSE123109. Oryza sativa Japonica Group. 15 samples. Type: Other.
Genome-wide formation of G-quadruplex DNA structures originating from Long Interspersed Elements in Alzheimer’s disease neurons
GEO Series GSE133113. Homo sapiens. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Meiotic cohesin RAD21L shapes 3D genome structure and transcription in the male germline [HiC]
GEO Series GSE297600. Mus musculus. 7 samples. Type: Other.
High-resolution 3D genome structures via single-cell Micro-C uncovers cohesin-mediated enhancer-promoter loops (SDS test)
GEO Series GSE280482. Homo sapiens. 71 samples. Type: Other.
Shared and unique components of human population structure and genome-wide signals of positive selection in South Asia
GEO Series GSE33489. Homo sapiens. 142 samples. Type: Genome variation profiling by SNP array; SNP genotyping by SNP array.
Genome structure and organization in mouse CD8 T cells
GEO Series GSE85560. Mus musculus. 7 samples. Type: Expression profiling by high throughput sequencing; Other.
A single-cell method to map higher-order 3D genome organization in thousands of individual cells reveals structural heterogeneity in mouse ES cells
GEO Series GSE154353. Mus musculus; Homo sapiens. 3 samples. Type: Other.
Comparison of the genomic structures and transcription between S. cerevisiae strains ZTW1 and ZGR3
GEO Series GSE41017. Saccharomyces cerevisiae. 3 samples. Type: Genome variation profiling by genome tiling array; Expression profiling by high throughput sequencing.
Depletion of RUNX1/ETO in t(8;21) AML cells leads to genome-wide changes in chromatin structure and transcription factor binding [ChIP-Seq and DNAse-Hypersensitivity data]
GEO Series GSE29222. Homo sapiens. 14 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome structure in single nucleoli by sequencing of laser capture nucleolar microdissection (RNA-Seq)
GEO Series GSE269198. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Human genomic DNA is widely interspersed with i-motif structures
GEO Series GSE248445. Homo sapiens. 16 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome-wide Patterns of Population Structure and Admixture among Hispanic/Latino Populations
GEO Series GSE21248. Homo sapiens. 100 samples. Type: Genome variation profiling by SNP array; SNP genotyping by SNP array.
Simultaneous profiling of 3D genome structure and DNA methylation in single human cells
GEO Series GSE130711. Homo sapiens. 4238 samples. Type: Methylation profiling by high throughput sequencing; Other.
Genome-wide Identification of DEAD-box RNA Helicase Targets Reveals Roles for RNA Secondary Structure Remodeling in mRNA Processing
GEO Series GSE106479. Saccharomyces cerevisiae. 28 samples. Type: Other; Genome binding/occupancy profiling by high throughput sequencing.
MPE-seq, a New Method for the Genome-wide Analysis of Chromatin Structure
GEO Series GSE69098. Mus musculus. 27 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
The three-dimensional structure of the EBV genome plays a crucial role in regulating viral gene expression in EBVaGC
GEO Series GSE239995. Homo sapiens; human gammaherpesvirus 4. 29 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other; Expression profiling by high throughput sequencing.
Genome-wide Studies of Chromatin Structure during Blood Cell Differentiation [HiC-seq]
GEO Series GSE93995. Homo sapiens. 4 samples. Type: Other.
Three-dimensional genome structures of single mammalian sperm [GAM]
GEO Series GSE277016. Homo sapiens. 830 samples. Type: Other.
Genome-wide transcript structure resolution in murine gammaherpesvirus 68: 3T12 deepCAGE
GEO Series GSE117644. Mus musculus. 7 samples. Type: Expression profiling by high throughput sequencing.
Droplet-based high-throughput 3D genome structure mapping of single cells with simultaneous transcriptomics (cell-line)
GEO Series GSE285230. Homo sapiens; Mus musculus. 6 samples. Type: Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.