Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
2,063
datasets available to search
ShareScore release 0.9.0
Dataset results
2,063 results for “single cell transcriptomics”
Single-cell transcriptomics reveals tissue architecture in ovarian carcinosarcoma
GEO Series GSE185014. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
Single-nucleus transcriptomic sequencing and cross integration comparison of multiple species revealed new cell composition and specific gene marker in hippocampal aging of tree shrew
GEO Series GSE229035. Tupaia belangeri. 15 samples. Type: Expression profiling by high throughput sequencing.
Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC [ST]
GEO Series GSE278687. Homo sapiens. 21 samples. Type: Other.
Spatially defined multicellular functional units in colorectal cancer revealed from single cell and spatial transcriptomics - scRNAseq v2 with cell multiplexing
GEO Series GSE260799. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-cell Transcriptomics Reveals Inter-ethnic Variation in Immune Response to Falciparum Malaria [Batch2]
GEO Series GSE273785. Homo sapiens. 15 samples. Type: Expression profiling by high throughput sequencing.
A proximal-to-distal survey of healthy adult human small intestine and colon epithelium by single-cell transcriptomics
GEO Series GSE185224. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Single‐cell transcriptomic analysis of mouse CA1 inhibitory neurons
GEO Series GSE99888. Mus musculus. 6971 samples. Type: Expression profiling by high throughput sequencing.
Single cell transcriptomics defines human islet cell signatures and reveals cell-type-specific expression changes in type 2 diabetes [bulk]
GEO Series GSE86468. Homo sapiens. 24 samples. Type: Expression profiling by high throughput sequencing.
High-throughput single cell transcriptome analysis and CRISPR screen identify key β cell-specific disease genes
GEO Series GSE101207. Mus musculus; Homo sapiens. 13 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single cell and spatial transcriptomic profile of whole CLAD and donor control lung tissue
GEO Series GSE224210. Homo sapiens. 11 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome analysis of single cells from the developing mouse dentate gyrus
GEO Series GSE104323. Mus musculus. 232 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome analyses reveal disturbed decidual microenvironment in women of advanced maternal age
GEO Series GSE305088. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Iterative single cell analyses define the transcriptome of the first functional hematopoietic stem cells
GEO Series GSE143637. Mus musculus. 1087 samples. Type: Expression profiling by high throughput sequencing.
Single cell transcriptomic profiling of microvascular endothelial cell heterogeneity in congenital diaphragmatic hernia
GEO Series GSE196313. Rattus norvegicus. 4 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic profile at single cell level of Age-associated B cells (ABCs) from individuals with different health conditions
GEO Series GSE207475. Homo sapiens. 21 samples. Type: Expression profiling by high throughput sequencing; Other.
A single-cell transcriptome atlas of the ageing Drosophila brain
GEO Series GSE107451. Drosophila melanogaster. 128 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
The single-cell transcriptomic atlas iPain identifies senescence of nociceptors as a therapeutical target for chronic pain treatment
GEO Series GSE253345. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single-cell transcriptomics of dynamic cell behaviors
GEO Series GSE193954. Mus musculus. 131 samples. Type: Expression profiling by high throughput sequencing.
Single-nuclei transcriptome analysis of IgM+ cells isolated from channel catfish spleen
GEO Series GSE278995. Ictalurus punctatus. 3 samples. Type: Expression profiling by high throughput sequencing.
Single-cell Transcriptomes Reveal Diverse Regulatory Strategies for Olfactory Receptor Expression and Axon Targeting
GEO Series GSE143038. Drosophila melanogaster. 1387 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.