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1,353 results for “single-cell transcriptomics”

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geo24/100

Single-cell transcriptomic profiling of the aging mouse brain

GEO Series GSE129788. Mus musculus. 16 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2019View details →
geo24/100

Single-cell transcriptome analysis reveals estrogen signaling augments the mitochondrial folate pathway to coordinately fuel purine and polyamine synthesis in breast cancer cells (T47D)

GEO Series GSE107863. Homo sapiens. 96 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenNov 2018View details →
geo24/100

Single-Cell Transcriptome Analysis Reveals Neutrophil Populations in Gastric Cancer

GEO Series GSE168537. Mus musculus; Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2023View details →
geo24/100

Single-cell transcriptomic profiling of Botrylloides diegensis of a whole colony

GEO Series GSE290754. Botrylloides diegensis. 1 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2025View details →
geo24/100

Profiling the rat cortical single-cell transcriptome reveals the potential mechanism of specific mode electroacupuncture stimulation opening the blood-brain barrier

GEO Series GSE272895. Rattus norvegicus. 10 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2024View details →
geo24/100

Canine peripheral blood TCRαβ T cell atlas: Identification of diverse subsets including CD8+ MAIT-like cells by combined single-cell transcriptome and V(D)J repertoire analysis

GEO Series GSE218355. Canis lupus familiaris. 8 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2023View details →
geo24/100

Single-cell transcriptomics revealed e-cigarettes-induced vascular remodeling by enhancing Tcf21 expression

GEO Series GSE288003. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2025View details →
geo24/100

single-cell transcriptomic analysis of mouse haematopoietic stem cells upon Nat10 deletion

GEO Series GSE290388. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2025View details →
geo24/100

Integrated single-cell chromatin and transcriptomic analyses of human scalp reveal etiological insights into genetic risk for hair and skin disease [scATAC-Seq]

GEO Series GSE212448. Homo sapiens. 13 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenMay 2023View details →
geo24/100

Single-cell transcriptome atlas of Moso bamboo

GEO Series GSE229126. Phyllostachys edulis. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2023View details →
geo24/100

Single-cell transcriptomic analysis uncovers intratumoral heterogeneity and drug-tolerant persister in ALK-rearranged lung adenocarcinoma

GEO Series GSE223779. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2023View details →
geo24/100

Tracking immunoglobulin gene editing and transcriptomic changes in GC B cells by single-cell analysis

GEO Series GSE188617. Homo sapiens. 14 samples. Type: Expression profiling by high throughput sequencing; Other.

openGEO-OpenFeb 2022View details →
geo24/100

Single-cell transcriptome sequencing analysis of endothelial cells in control and high glucose treated zebrafish embryos

GEO Series GSE276251. Danio rerio. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2024View details →
geo24/100

Single-cell transcriptomic analysis reveals that inflammation drives the unfolded protein response during endocrine aging in mice

GEO Series GSE239316. Mus musculus. 24 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2025View details →
geo24/100

Single-cell transcriptomics of resected human traumatic brain injury tissues reveals acute activation of endogenous retroviruses in oligodendroglia

GEO Series GSE209552. Homo sapiens. 30 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2023View details →
geo24/100

Single-cell transcriptome and cell-specific network analysis reveal the reparative effect of NT-4 supplementation in preantral follicles grown in vitro [oocyte_RNA-seq]

GEO Series GSE176516. Mus musculus. 15 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2021View details →
geo24/100

Single-cell transcriptome characteristics of postnatal ILC from mice skin

GEO Series GSE214848. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2023View details →
geo24/100

Interspecific single-cell transcriptomic analysis reveals differences in signaling pathways governing gonadal primordial germ cells between chicken and zebra finch (Taeniopygia guttata) [chicken scRNA

GEO Series GSE208178. Gallus gallus. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenNov 2023View details →
geo24/100

Single-cell transcriptome analysis of avian neural crest migration reveals signatures of invasion and molecular transitions [bulk RNA-seq]

GEO Series GSE108199. Gallus gallus. 12 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2017View details →
geo24/100

Proteomic and single-cell transcriptomic dissection of human plasmacytoid dendritic cell response to influenza virus

GEO Series GSE189120. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2022View details →

ScienceDex guides

Understand access before you commit

These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record

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