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1,487 results for “tagging”
Data from: Regional movements of satellite-tagged whale sharks Rhincodon typus in the Gulf of Aden
<p>To gain insight into whale shark (<i>Rhincodon typus</i>)<i> </i>movement patterns in the Western Indian Ocean, we deployed eight pop-up satellite tags at an aggregation site in the Arta Bay region of the Gulf of Tadjoura, Djibouti in the winter months of 2012, 2016 and 2017. Tags revealed movements ranging from local-scale around the Djibouti aggregation site, regional movements along the coastline of Somaliland, movements north into the Red Sea, and a large-scale (>1000 km) movement to the east coast of Somalia, outside of the Gulf of Aden. Vertical movement data revealed high occupation of the top ten meters of the water column, diel vertical movement patterns and deep diving behaviour. Long-distance movements recorded both here and in previous studies suggest that connectivity between the whale sharks tagged at the Djibouti aggregation and other documented aggregations in the region are likely within annual timeframes. In addition, wide-ranging movements through multiple nations, as well as the high use of surface waters recorded, likely exposes whale sharks in this region to several anthropogenic threats, including targeted and bycatch fisheries and ship-strikes. Area-based management approaches focusing on seasonal hotspots offer a way forward in the conservation of whale sharks in the Western Indian Ocean. </p>
Semantic metadata annotation: tagging medline abstracts for enhanced information access
<p>The object of this study is to develop methods for automatically annotating the argumentative role of sentences in scientific abstracts. Working from Medline abstracts, we classified sentences into four major argumentative roles: objective, method, result, conclusion. The idea is that if the role of each sentence can be marked up, then this metadata can be used during information retrieval to seek for particular types of information such as novelty, conclusions, methodologies, aims/goals of a scientific piece of work.</p> <p> </p>
Adventures in tagging - local history in East London
<p>This paper describes a web based local history project in East London. The project is called 'the Newham Story' (http://www.newhamstory.com/) and it aims to capture the history of the borough through the use of both formal, and informal user generated content.<br> The technical application is the Drupal open source content management system. This is a modular application and we are using and experimenting with various taxonomy tools.</p> <p> </p>
Figure 3 in Drag of suction cup tags on swimming animals: Modeling and measurement
Figure 3. An illustration of the Model B tag in the water tunnel. Both models were mounted to the load cell via an extension used to submerge the test piece upside-down below the surface of the water tunnel. A grounding board surrounded the extension where the test piece was mounted to create a uniform ceiling for the test section, but the space above the grounding board was flooded.
Figure 1 in Drag of suction cup tags on swimming animals: Modeling and measurement
Figure 1. Tag housing designs in plan view (upper panels), longitudinal cross-section (middle panels) and frontal cross-section (bottom panels). The longitudinal cross-sections are taken along the center line of the tags (marked A-A in the upper panels). The frontal cross-section is the outer envelope of the shape that is exposed to the flow when the tag is aligned with its longitudinal axis parallel to the direction of motion (marked B-B in the upper panels). Dimensions are in millimeters.
Figure 5 in Drag of suction cup tags on swimming animals: Modeling and measurement
Figure 5. Detail of the flow path-lines around Models A and B. (A) Flow lines in the vicinity of a forward suction cup mounting pillar at a flow speed of 5.6 m/s demonstrating the flow disturbance created by the suction cups. The eddies and reduced speed result in larger forces acting on the tag. (B) Improved flow around the Model B tag design results from screening of the cups. (C) Flow through the channel underneath the Model B design showing flow detachment near the aft end of the channel.
Fig. 2 in Evaluating effects of harmonic radar tag attachment on the survivorship and dispersal capacity of Riptortus pedestris (Hemiptera: Alydidae)
Fig. 2. Vertical distance (mean ± SE) climbed by Riptortus pedestris for 10 min in the laboratory climbing test arena (n = 30) (A). Time duration (mean ± SE) from release to take-off of R. pedestris under field conditions (n = 27 for untagged and 26 for tagged) (B).
Fig. 1. Adult Riptortus pedestris with a in Evaluating effects of harmonic radar tag attachment on the survivorship and dispersal capacity of Riptortus pedestris (Hemiptera: Alydidae)
Fig. 1. Adult Riptortus pedestris with a dipole harmonic radar tag. The arrow indicates the radar tag attached on the pronotum.
Supporting data for: "Frequency-tagged visual evoked responses track syllable effects in visual word recognition"
<p>The dataset consists of the original 17 .bdf files.</p>
Sense-Tagged corpora for Word Sense Disambiguation in several languages
<p>Copies of Sense-Tagged corpora for Word Sense Disambiguation in several languages</p> <p>English, French, Spanish, Russian</p> <p> </p>
The locus tags and annotation in Serratia plymuthica UBCF_13 genome
<p><b>Background:</b> The <i>Serratia plymuthica</i> UBCF_13 is a phylloplane associated plant bacterium showing antifungal activity. Whole genome sequence provides information to get more insight about evolutionary study, unique traits in the genome and possibility to explore potential of this microorganism for future study. Here, we report the genome sequence of <i>S. plymuthica </i>UBCF_13 and the comparison with other seventeen strain.</p> <p><b>Methods:</b> Continuous short reads were attained from Illumina sequencing runs and reads of 150 bp were merged into a single dataset. A pan-genome based method was used to identify the core-genome of <i>S. plymuthica </i>species and the unique gene in UBCF-13.</p> <p><b>Results:</b> Assembled Illumina reads of <i>S. plymuthica </i>strain UBCF_13 genome was produced a 5.46 Mb circular genome sequence. 3315 genes were found to belong to the core-genome sheared by the 18 strains evaluated. The UBCF_13 genome harbors 488 unique genes, where 300 of which only can be found in this strain. The raw and assembled data is available via NCBI Short Read Archive (accession Number: SRR15012717) and genome database (accession number: CP068771)</p>
Figure 1 in Estimating population density of the medicinal leech Hirudo orientalis Utevsky and Trontelj, 2005 (Clitellata: Hirudinida) using Visible Implant Elastomer tags
Figure 1. Artificial medicinal leech ponds of the University of Tehran.
Figure 3 from: Penev L, Agosti D, Georgiev T, Catapano T, Miller J, Blagoderov V, Roberts D, Smith V, Brake I, Ryrcroft S, Scott B, Johnson N, Sautter G, Chavan V, Robertson T, Remsen D, Stoev P, Parr C, Knapp S, Kress W, Thompson F, Erwin T (2010) Semantic tagging of and semantic enhancements to systematics papers: ZooKeys working examples. ZooKeys 50: 1-16. https://doi.org/10.3897/zookeys.50.538
Figure 3 - Flowchart of an integrated, XML-based editorial, publishing and dissemination process applied in ZooKeys through the Pensoft Mark Up Tool (PMT).
Figure 2 from: Penev L, Agosti D, Georgiev T, Catapano T, Miller J, Blagoderov V, Roberts D, Smith V, Brake I, Ryrcroft S, Scott B, Johnson N, Sautter G, Chavan V, Robertson T, Remsen D, Stoev P, Parr C, Knapp S, Kress W, Thompson F, Erwin T (2010) Semantic tagging of and semantic enhancements to systematics papers: ZooKeys working examples. ZooKeys 50: 1-16. https://doi.org/10.3897/zookeys.50.538
Figure 2 - Four stages of an XML-based editorial, publication and dissemination workflow applied in ZooKeys (stages 1, 2, 4) and/or Plazi (stages 3, 4). Forms in blue are either implemented or prototyped, forms in red are in a process of development.
Figure 4 from: Penev L, Agosti D, Georgiev T, Catapano T, Miller J, Blagoderov V, Roberts D, Smith V, Brake I, Ryrcroft S, Scott B, Johnson N, Sautter G, Chavan V, Robertson T, Remsen D, Stoev P, Parr C, Knapp S, Kress W, Thompson F, Erwin T (2010) Semantic tagging of and semantic enhancements to systematics papers: ZooKeys working examples. ZooKeys 50: 1-16. https://doi.org/10.3897/zookeys.50.538
Figure 4 - Pensoft Taxon Profile created dynamically by PMT and available through a link to any taxon name mentioned within a paper. In this case, this is the oak species Quercus suber L., cited in a zoological paper (Stoev et al. 2010). The red arrow indicates the "Create your own taxon profile" option, that may be used by the reader to create profiles of any taxon name or to improve search results for taxonomic names cited in the paper.
Figure 1 from: Penev L, Agosti D, Georgiev T, Catapano T, Miller J, Blagoderov V, Roberts D, Smith V, Brake I, Ryrcroft S, Scott B, Johnson N, Sautter G, Chavan V, Robertson T, Remsen D, Stoev P, Parr C, Knapp S, Kress W, Thompson F, Erwin T (2010) Semantic tagging of and semantic enhancements to systematics papers: ZooKeys working examples. ZooKeys 50: 1-16. https://doi.org/10.3897/zookeys.50.538
Figure 1 - Conventional layout of a standard taxonomic publication in PDF format (A) and the same portion of text in XML-tagged format (B). Explanations: The sign "<" incidates the start tag and the symbol " denotes the start of the treatment and the tag (not visible here) marks up the end of the treatment within the text of the paper. The tags and denote the start and end of a particular section of the treatment, in this case the type material data (labelled as Type material.)
oopsacas minuta proteome with genbank id and locus tag
<p>oopsacas minuta proteome with genbank id and locus tag</p>
Dataset for "Multiple helium tagging and OH vibrational spectroscopy of cold protonated glycine ions"
<p>Dataset for "Multiple helium tagging and OH vibrational spectroscopy of cold protonated glycine ions"</p>
Figure 1 in Bombus impatiens (Hymenoptera: Apidae) display reduced pollen foraging behavior when marked with bee tags vs. paint
Figure 1. Individuals of Bombus (Pyrobombus) impatiens Cresson marked with bee tags (left) and paint (right). Scale bar = 1 cm.
In vivo tracking of functionally tagged Rad51 unveils a robust strategy of homology search.
<p>This deposit contains all the raw data presented in the Figures of this manuscript<br> </p>
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.