Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
695
datasets available to search
ShareScore release 0.7.1
Dataset results
695 results for “topologies”
Nanoscale binding site localization by molecular distance estimation on native cell surfaces using topological image averaging
Open the record for dataset details and reuse information.
Data from: Topological, chemical, and electro-optical characteristics of riboflavin-doped artificial and natural DNA thin films
Open the record for dataset details and reuse information.
Data from: Topology, divergence dates, and macroevolutionary inferences vary between different tip-dating approaches applied to fossil theropods (Dinosauria)
Open the record for dataset details and reuse information.
Network topology and patch connectivity affect dynamics in experimental and model metapopulations
Open the record for dataset details and reuse information.
Data from: Bayesian tests of topology hypotheses with an example from diving beetles
Open the record for dataset details and reuse information.
Data from: Temporal lobe epilepsy: hippocampal pathology modulates white matter connectome topology and controllability
Open the record for dataset details and reuse information.
Bayesian tip-dated phylogenetics in paleontology: topological effects and stratigraphic fit
Open the record for dataset details and reuse information.
Data for: Topological defects produce kinks in biopolymer filament bundles
Open the record for dataset details and reuse information.
Comprehensive dissection of cis-regulatory elements in a 2.8 Mb topologically associated domain in six human cancers
GEO Series GSE278245. Homo sapiens. 21 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
Muscle progenitor specification and myogenic differentiation are associated with changes in chromatin topology.
GEO Series GSE150638. Mus musculus. 26 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
Topological isolation as a mechanism for precise control of developmental regulators in mammalian genomes [RNA-seq]
GEO Series GSE127194. Homo sapiens. 21 samples. Type: Expression profiling by high throughput sequencing.
Mutational synergy coordinately remodels chromatin accessibility, enhancer landscape and 3-Dimensional DNA topology to alter gene expression during leukemia induction (ATAC-seq)
GEO Series GSE146616. Mus musculus. 10 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Topological demarcation by HMGB2 is disrupted early upon senescence entry and induces CTCF clustering across cell types
GEO Series GSE98448. Homo sapiens. 53 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing; Other.
Inter-chromosomal contacts demarcate genome topology along a spatial gradient
GEO Series GSE242273. Homo sapiens. 8 samples. Type: Other.
Topologically-associating domains and their long-range contacts are established during early G1 coincident with the establishment of the replication timing program
GEO Series GSE66579. Mus musculus. 109 samples. Type: Other.
CTCF-Mediated Human 3D Genome Architecture Reveals Chromatin Topology for Transcription
GEO Series GSE72816. Homo sapiens. 6 samples. Type: Other.
Genome-wide transcriptional, epigenetic, and topological changes occurring in human natural killer cells in response to HDAC inhibitor [ChIP-seq]
GEO Series GSE227660. Homo sapiens. 9 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Spo11 generates gaps through concerted cuts at sites of topological stress
GEO Series GSE171046. Saccharomyces cerevisiae; Saccharomyces kudriavzevii; Nakaseomyces glabratus. 71 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Analysis of Drosophila melanogaster Chromosome Topology in Larval Eye and Antennal Discs
GEO Series GSE136267. Drosophila melanogaster. 6 samples. Type: Other.
Spo11 generates gaps through concerted cuts at sites of topological stress [Top2]
GEO Series GSE169760. Saccharomyces cerevisiae; Nakaseomyces glabratus. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.