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4,144 results for “ITS barcode”

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geo20/100

DNA barcoding reveals ongoing immunoediting of clonal cancer populations during metastatic progression and in response to immunotherapy

GEO Series GSE210057. Mus musculus; synthetic construct. 207 samples. Type: Other; Expression profiling by high throughput sequencing.

openGEO-OpenAug 2022View details →
zenodo20/100

FIGURES 1–6. 1–3 in Two new species in the genus Destinoides (Hemiptera: Cicadellidae, Ledrinae) from China, with DNA barcoding data

FIGURES 1–6. 1–3. Destinoides hainanensis sp. nov. Holotype: 1. habitus, dorsal view; 2. habitus, lateral view; 3. face; 4–6. Destinoides rubeus sp. nov. Holotype: 4. habitus, dorsal view; 5. habitus, lateral view; 6. face; Scale bars = 1mm.

opennotspecifiedDec 2019View details →
zenodo20/100

FIGURE 13 in Report on a new species of Plutomurus (Collembola, Tomoceridae) from a South Korean limestone cave, with notes on its DNA barcode

FIGURE 13. Maximum-likelihood tree (using GTR+I model, bootstrap=1000) of Plutomurus spp. based on COI gene. Neighbour joining tree (using K2-P model, bootstrap=1000) shared the similar topology. Node values represent likelihood bootstrap value.

opennotspecifiedJan 2020View details →
zenodo20/100

FIGURE 2 in A new Mediterranean species of Dolistenus (Diplopoda, Platydesmida, Andrognathidae), with an updated key for the genus and the first contribution for a barcode database of European Platydesmida

FIGURE 2. Map showing the type localities of Dolistenus garciaparisi sp. nov., and sampled populations of D. savii, D. iberoalbus, Ebenostenus iberoniger and Fioria demangei included in this study.

opennotspecifiedJan 2020View details →
zenodo20/100

FIGURE 1 in A new Mediterranean species of Dolistenus (Diplopoda, Platydesmida, Andrognathidae), with an updated key for the genus and the first contribution for a barcode database of European Platydesmida

FIGURE 1. Habitus in vivo: a) Dolistenus garciaparisi sp. nov. from Alcossebre, Castellón Province, Spain; b) Dolistenus savii from San Fratello, Messina Province, Sicily; c) Dolistenus iberoalbus from Avión, Ourense Province, Spain.

opennotspecifiedJan 2020View details →
zenodo20/100

Figure 10 in Additional new species of Grouvellinus Champion 1923 (Insectaı Coleopteraı Elmidae) discovered by citizen scientists and DNA barcoded in the field applying a novel MinIONbased workflow

Figure 10. Grouvellinus nigerquadratus, sp. nov. (paratypes): (a) anteriodorsal aspect with pronotum; (b) anterioventral aspect with prosternum; (c) posterioventral aspect with meso-, metaventrite, and ventrites 1–5.

opennotspecifiedJan 2020View details →
zenodo20/100

Figures 6–9 in Additional new species of Grouvellinus Champion 1923 (Insectaı Coleopteraı Elmidae) discovered by citizen scientists and DNA barcoded in the field applying a novel MinIONbased workflow

Figures 6–9. Habitus of the Grouvellinus species collected from the Tawan Hills Park. 6: G. luciaensis, sp. nov. (paratype male from Lucia River); 7: G. borneensis, sp. nov. (paratype male from Tawau River environment); 8: G. sp.1 (female from Tawau River environment); 9: G. sp.2 (female from Lucia River). Scale: 1 mm.

opennotspecifiedJan 2020View details →
zenodo20/100

Figure 13 in Additional new species of Grouvellinus Champion 1923 (Insectaı Coleopteraı Elmidae) discovered by citizen scientists and DNA barcoded in the field applying a novel MinIONbased workflow

Figure 13. Grouvellinus cruxniger, sp. nov. (paratypes): (a) aedeagus, lateral; (b) aedeagus, ventral; (c) ovipositor (half), ventral. Scale bar = 0.1 mm.

opennotspecifiedJan 2020View details →
zenodo20/100

Figure 1 in Additional new species of Grouvellinus Champion 1923 (Insectaı Coleopteraı Elmidae) discovered by citizen scientists and DNA barcoded in the field applying a novel MinIONbased workflow

Figure 1. (a) Co-authors and assistants of the Taxon Expedition to Tawau Hills Park, Sabah, Malaysian Borneo, performing microhabitat-specific sampling; (b) Co-authors during beetle collection at a blacklight trap installed in the vicinity of the Tawau River; (c) The first author (second from the right) instructing Taxon Expedition participants on the identification of riffle beetles; (d) the transportable molecular field laboratory at the Tawau Park Station; (e) Type locality of Grouvellinus borneensis, sp. nov., G. cruxniger, sp. nov., G. nigerquadratus, sp. nov., and collection site of G. sp. 1; (f) Type locality of Grouvellinus luciaensis, sp. nov., and collection site of G. andrekuipersi, G. nigerquadratus, sp. nov. and G. sp. 2.

opennotspecifiedJan 2020View details →
zenodo20/100

Figure 15 in Additional new species of Grouvellinus Champion 1923 (Insectaı Coleopteraı Elmidae) discovered by citizen scientists and DNA barcoded in the field applying a novel MinIONbased workflow

Figure 15. Grouvellinus luciaensis, sp. nov. (paratypes): (a) aedeagus, lateral; (b) aedeagus, ventral; (c) ovipositor (half), ventral. Scale bar = 0.1 mm.

opennotspecifiedJan 2020View details →
zenodo20/100

Figure 11 in Additional new species of Grouvellinus Champion 1923 (Insectaı Coleopteraı Elmidae) discovered by citizen scientists and DNA barcoded in the field applying a novel MinIONbased workflow

Figure 11. Grouvellinus nigerquadratus, sp. nov. (paratypes): (a) aedeagus, lateral; (b) aedeagus, ventral; (c) ovipositor (half), ventral. Scale bar = 0.1 mm.

opennotspecifiedJan 2020View details →
zenodo20/100

FIGURES 21–24 in COI mtDNA barcoding and morphology for species delimitation in the spider genus Ixchela Huber (Araneae: Pholcidae), with the description of two new species from Mexico

FIGURES 21–24. Ixchela zapatai sp. nov. Female epigynum: 21, ventral view. 22, dorsal view. 23, frontal view. 24, lateral view. MSE: median septum of epigynum, PP: pore plates. Scale bars: 0.5 mm.

opennotspecifiedMar 2020View details →
zenodo20/100

FIGURES 10–13 in COI mtDNA barcoding and morphology for species delimitation in the spider genus Ixchela Huber (Araneae: Pholcidae), with the description of two new species from Mexico

FIGURES 10–13. Ixchela panchovillai sp. nov. Female epigynum: 10, ventral view. 11, dorsal view. 12, frontal view. 13, lateral view. MSE: median septum of epigynum, PP: pore plates. Scale bars: 0.5 mm (Figs 12, 13), 1 mm (Figs 10, 11).

opennotspecifiedMar 2020View details →
zenodo20/100

FIGURE 2 in COI mtDNA barcoding and morphology for species delimitation in the spider genus Ixchela Huber (Araneae: Pholcidae), with the description of two new species from Mexico

FIGURE 2. Maximum Likelihood gene tree (highest log: -3749.87), constructed with COI barcode sequences of Ixchela. Colors in the branches indicate species; same colors are in the bars, which represent the different species delimitation methods used for their validation. Red branches + blue circles indicate the new species. Numbers below the bars represent the species recovered in each species delimitation method (not considering the outgroup: P. dugesi): 1: morphology (M). 2: neighbor-joining (NJ). 3: GMYC. 4: ABGD with recursive partitions (RP). 5: ABGD with initial partitions (IP). 6: bPTP with IB. 7: bPTP with ML. Numbers above branches are Bootstrap support values (>50% significant), number below are posterior probabilities (PP) support values under BI.

opennotspecifiedMar 2020View details →
zenodo20/100

FIGURE 1 in COI mtDNA barcoding and morphology for species delimitation in the spider genus Ixchela Huber (Araneae: Pholcidae), with the description of two new species from Mexico

FIGURE 1. Neighbour-Joining (NJ) with p-distances tree constructed with COI barcode sequences from different specimens and species of Ixchela. Colors in the branches indicate species, red branches + blue circles indicate the new species. Male cheliceral, male palps, and female epigyna are showed for each species to show morphological structures taxonomically important at species level. Number on branches represent Bootstrap support values (>50% significant).

opennotspecifiedMar 2020View details →
zenodo20/100

FIGURE 31 in COI mtDNA barcoding and morphology for species delimitation in the spider genus Ixchela Huber (Araneae: Pholcidae), with the description of two new species from Mexico

FIGURE 31. Type localities of Ixchela panchovillai sp. nov. (green circle) and Ixchela zapatai sp. nov. (red circle), in the state of Oaxaca, Mexico.

opennotspecifiedMar 2020View details →
zenodo20/100

FIGURE 7 in New species of Silhouettea (Teleostei: Gobiidae) from Qeshm Island, Iran and the DNA barcoding of the Persian Gulf and Oman Sea gobies

FIGURE 7. Bayesian tree visualizing the results of the three different molecular species delimitation methods based on COI. ABGD: Automatic Barcode Gap Discovery; SP: reversed Statistical Parsimony; and bPTP: Bayesian Poisson tree process model. Posterior probability values are provided at the nodes.

opennotspecifiedMar 2020View details →
zenodo20/100

FIGURE 5 in New species of Silhouettea (Teleostei: Gobiidae) from Qeshm Island, Iran and the DNA barcoding of the Persian Gulf and Oman Sea gobies

FIGURE 5. Silhouettea ghazalae sp. nov., PMR VP4678, holotype, female, 27.35 + 6.29 mm, Qeshm Island, Persian Gulf: A: whole lateral view with the vertebrae numbered; B) close-up image of the caudal fin skeleton: EPU=epural, HS PU=haemal spine of preural centrum, HYP=hypural, NS PU=neural spine of preural, centrum, PHY=parhypural, PU=preural centrum, UR=urostyle, DPR, dorsal procurrent rays; VPR, ventral procurrent rays. X-ray by H.R. Esmaeili and U.K. Schliewen.

opennotspecifiedMar 2020View details →
zenodo20/100

FIGURE 2 in New species of Silhouettea (Teleostei: Gobiidae) from Qeshm Island, Iran and the DNA barcoding of the Persian Gulf and Oman Sea gobies

FIGURE 2. Silhouettea ghazalae sp. nov., PMR VP4678, holotype, female, 27.35 + 6.29 mm, Qeshm Island, Persian Gulf. A: freshly collected specimen; B: preserved specimen. Photos by R. Sadeghi (A), M. Kovačić (B).

opennotspecifiedMar 2020View details →
zenodo20/100

FIGURE 1 in New species of Silhouettea (Teleostei: Gobiidae) from Qeshm Island, Iran and the DNA barcoding of the Persian Gulf and Oman Sea gobies

FIGURE 1. Silhouettea ghazalae sp. nov., PMR VP4678, reversible stained holotype, female, 27.35 + 6.29 mm, Qeshm Island, Persian Gulf: A: chin with mental fold outlined, head down position; B: membranous edge at opercle, extension on the pectoral rays origin marked; C: preopercular edge, head sensory papillae rows resembling longitudinally dashed lines (e.g. row c) or transversal stiches (e.g. row ot). D: membranous edge at ventrolateral head ridge (vhr) divided from opercular membrane (om) by indentation (marked by arrow); E: nape and predorsal region naked; Photos by M. Kovačić.

opennotspecifiedMar 2020View details →

ScienceDex guides

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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record

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