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TreeGOER Köppen-Geiger Zone Distributions: Observations for 48,129 tree species across the 30 climate zones for 1931-1960, 1961-1990 and 1991-2020 climates
<p><strong>TreeGOER (Tree Globally Observed Environmental Ranges)</strong> is a database that documents the environmental ranges (minimum, maximum, median, mean and 5%, 25%, 75% and 95% quantiles) for 48,129 tree species and for 51 environmental variables, including 38 bioclimatic variables, 8 soil variables and 3 topographic variables. TreeGOER is available from the following Zenodo archives: <a href="https://doi.org/10.5281/zenodo.7922927">https://doi.org/10.5281/zenodo.7922927</a></p> <p>The TreeGOER ranges were calculated after cleaning occurrence records and standardizing species names with the <a href="https://bsapubs.onlinelibrary.wiley.com/doi/10.1002/aps3.11388">WorldFlora</a> R package to <a href="https://onlinelibrary.wiley.com/doi/10.1002/tax.12373">World Flora Online</a> or the <a href="https://www.nature.com/articles/s41597-021-00997-6">World Checklist of Vascular Plants</a> for a global GBIF occurrence download of 44,267,164 occurrences (GBIF.org 2021 <strong>GBIF Occurrence Download</strong> <a href="https://doi.org/10.15468/dl.77gcvq">https://doi.org/10.15468/dl.77gcvq</a>). The process of compilation of TreeGOER with 30 arc-seconds global grid layers, two examples of BIOCLIM applications that investigated the effects of climate change on global tree diversity patterns and R scripts to repeat these analyses have been described by Kindt, R. (2023). <strong>TreeGOER: A database with globally observed environmental ranges for 48,129 tree species</strong>. Global Change Biology 29: 6303–6318. <a href="https://onlinelibrary.wiley.com/doi/10.1111/gcb.16914">https://onlinelibrary.wiley.com/doi/10.1111/gcb.16914</a>.</p> <p>This Zenodo archive documents the occurrence of the same previously compiled and cleaned observations for the TreeGOER across global raster layers that document the 1931-1960, 1961-1990 and 1991-2020 <strong>Köppen-Geiger climate zones</strong>. These global raster layers were created for the following article:</p> <ul> <li>Beck, H. E., T. R. McVicar, N. Vergopolan, A. Berg, N. J. Lutsko, A. Dufour, Z. Zeng, X. Jiang, A. I. J. M. van Dijk, and D. G. Miralles. High-resolution (1 km) Köppen-Geiger maps for 1901–2099 based on constrained CMIP6 projections, Scientific Data 10, 724 (2023). <a href="https://doi.org/10.1038/s41597-023-02549-6">https://doi.org/10.1038/s41597-023-02549-6</a>. The Köppen-Geiger classifcation maps, associated confidence maps, and underpinning monthly near-surface air temperature and precipitation climatologies in netCDF format can all be downloaded <a href="https://doi.org/10.6084/m9.figshare.21789074.v1">here</a>.</li> </ul> <p> </p> <p>For each of the 48,129 tree species, the distribution is given for</p> <ul> <li>Historical climates: number of observations in the 1931-1960, 1961-1990 and 1991-2020 Köppen-Geiger Zone climate zone</li> <li>Mixed climate: number of observations in the 1931-1960 Köppen-Geiger Zone climate zones if observations were before 1961, in the 1961-1990 Köppen-Geiger Zone climate zones if observations were between 1961 and 1990, and in the 1991-2020 Köppen-Geiger Zone climate zones if observations were after 1990</li> <li>Static climate: number of observations if those observations remained in the same Köppen-Geiger Zone climate zones</li> </ul> <p> </p> <p>The development of this data set archive supported by the <strong>Darwin Initiative</strong> to project DAREX001 of <em>Developing a Global Biodiversity Standard certification for tree-planting and restoration</em>, by <strong>Norway’s International Climate and Forest Initiative through the Royal Norwegian Embassy in Ethiopia</strong> to the <em>Provision of Adequate Tree Seed Portfolio</em> project in Ethiopia, by the <strong>Green Climate Fund</strong> through the IUCN-led <em>Transforming the Eastern Province of Rwanda through Adaptation</em> and through the <em>Readiness proposal on Climate Appropriate Portfolios of Tree Diversity for Burkina Faso</em> projects, by the <strong>Bezos Earth Fund</strong> to the <em>Quality Tree Seed for Africa in Kenya and Rwanda</em> project and by the <strong>German International Climate Initiative (IKI)</strong> to the regional tree seed programme on <em>The Right Tree for the Right Place for the Right Purpose in Africa</em>.</p> <p> </p>
FIGURE 129 in Taxonomic Revision of the Spider Genus Actinopus Perty, 1833 (Araneae, Mygalomorphae, Actinopodidae)
FIGURE 129. Actinopus laventana sp. nov., male: A–C LZI M135: A. Copulatory bulb, prolateral; B. Copulatory bulb, dorsal; C. Copulatory bulb, retrolateral. PA-Paraembolic apophysis; BTA-Basal Tegular Apophysis; PAc-Prolateral Accessory keel; PI- Prolateral Inferior keel; PS-Prolateral Superior keel; Arrows: Serrated area. Paratype, female: D FCE-MY 977: D. Spermathecae, dorsal view. Scales lines: 1 mm.
Figs 129–135. Holocnemus hispanicus Wiehle, 1933. 129–131 in Revisions of Holocnemus and Crossopriza: the spotted-leg clade of Smeringopinae (Araneae, Pholcidae)
Figs 129–135. Holocnemus hispanicus Wiehle, 1933. 129–131. Male from Spain, Cáceres, Conquista de la Sierra (CRB); left palp, prolateral, dorsal, and retrolateral views. 132. Female from Spain, Málaga, Ronda (CRB); abdomen, ventral view. 133. Female from Spain, Granada, "Sierra Havana" (SMF 8802); epigynum, ventral view. 134. Female from Spain, Málaga, between Periana and Ventas Zafarrayas (ZFMK Ar 23862); epigynum, ventral view. 135. Female from Spain, Badajoz, SW of Zafra (CRB); detail of female left femora 3 and 4, retrolateral-ventral view. Scale bars: 129–134 = 0.5 mm; 135 = 0.2 mm.
Figs 126–129 in The ischnoceran chewing lice (Phthiraptera: Ischnocera) of bulbuls (Aves: Passeriformes: Pycnonotidae), with descriptions of 18 new species
Figs 126–129. Philopteroides haerixos sp. nov. 126. Male head, dorsal and ventral views. 127. Male genitalia, dorsal view. 128. Male genitalia, ventral view. 129. Female subgenital plate and vulval margin, ventral view.
FIGURE 129 in Grenadiers (Teleostei: Gadiformes: Macrouridae) of Japan and adjacent waters, a taxonomic monograph
FIGURE 129. Coryphaenoides rudis. (A) BSKU 49577, 75.7 mm HL, 384+ mm TL, Hyuga-nada, Pacific, 1453–1481 m depth; (B) BSKU 49468, 127 mm HL, 599+ mm TL, collected with BSKU 49577; (C–E) HUMZ 72029, 248 mm HL, 1079+ mm TL, between Shichito-Iojima Ridge and Marcus Island, Pacific. (A–C) Lateral views in fresh condition; (D) dorsal and (E) ventral views of the head and trunk in preserved condition. [Photos: reproduced from Nakayama & Endo (2016a: fig. 4a–e) with permission from the Ichthyological Society of Japan]
Figures 120–129 in Review of Orthochiroides Kovařík 1998 with description of a new species (Scorpiones: Buthidae)
Figures 120–129: Comparison of metasoma V and telson of five ingroup genera in lateral view. Figures 120–121. Orthochiroides somalilandus sp. n., male holotype (120) and female paratopotype (121). Figures 122–123. Orthochirus scrobiculosus (Grube, 1873), male topotype (NMB, 122) and female holotype (123). Figures 124–125. Neobuthus eritreaensis Lowe et Kovařík, 2016, male (124) and female (125) paratypes. Figures 126–127. Butheolus gallagheri Vachon, 1980, male (126) and female (127) from Oman, Mirbat, 17°02.19'N 54°38.75'E, 54 m a. s. l. (FKCP). Figures 128–129. Gint amoudensis Kovařík et al., 2018, male holotype (128) and female paratype (129).
Figures 128–129 in Scorpions of the Horn of Africa (Arachnida: Scorpiones). Part XXX. Parabuthus (Buthidae) (Part III), with description of three new species from Somaliland and occurrence of Parabuthus eritreaensis Kovařík, 2003
Figures 128–129: Figure 128. Map showing confirmed distribution of Parabuthus spp. In Djibouti, Eritrea, Ethiopia, Somalia, and Somaliland. Figure 129. Parabuthus eritreaensis, female from Somaliland in vivo habitus.
Figures 129–131 in The long-horned caddisfly genus Oecetis (Trichoptera: Leptoceridae) in Australia: two new species groups and 17 new species
Figures 129–131, distribution of species within Australia:129, O. digitata sp. nov., 130, O. ancala sp. nov.; 131, O. crosslandi sp. nov.
Figs 129–132. Strongylophthalmia spp. 129–130 in DIPTERA OF THAILAND A summary of the families and genera with references to the species representations
Figs 129–132. Strongylophthalmia spp. 129–130 = S. dorsocentralis sp. n., holotype female: 129 = wing, 130 = mesonotum dorsally; 131 = S. palpalis sp. n., male palpus, lateral, 132 = S. punctata
Figs 129–135 in Revision Of The Genus Amygdalops Lamb, 1914 (Diptera, Anthomyzidae) Of The Oriental, Australasian And Oceanian Regions
Figs 129–135. Amygdalops abnormis sp. n., male holotype (Sri Lanka). 129 = external genitalia, caudal view, 130 = same, lateral view, 131 = transandrium, caudal view, 132 = hypandrium and associated structures, lateral view, 133 = gonostylus, sublateral view (widest extension), 134 = filum of distiphallus, ventral view, 135 = aedeagal complex, lateral view. Scales: Fig. 133 = 0.05 mm, others = 0.1 mm
◂Fig. 4 A molecular tree of 51 systematically representative Peridiniaceae, including all 28 accessions assignable to P. volzii. Maximum Likelihood tree (–ln = 22,017.62), as inferred from a rRNA nucleotide alignment (1,129 parsimony-informative sites) and with strain number information. Numbers on branches are ML bootstrap (above) and Bayesian support values (below) for the clusters (asterisks indicate maximal support values, values under 50 and 0.90, respectively, are not shown). Clades are indicated (abbreviations: HET, Heterocapsaceae; PPE, Protoperidiniaceae) in Morphological and molecular variability of Peridinium volzii Lemmerm. (Peridiniaceae, Dinophyceae) and its relevance for infraspecific taxonomy
◂Fig. 4 A molecular tree of 51 systematically representative Peridiniaceae, including all 28 accessions assignable to P. volzii. Maximum Likelihood tree (–ln = 22,017.62), as inferred from a rRNA nucleotide alignment (1,129 parsimony-informative sites) and with strain number information. Numbers on branches are ML bootstrap (above) and Bayesian support values (below) for the clusters (asterisks indicate maximal support values, values under 50 and 0.90, respectively, are not shown). Clades are indicated (abbreviations: HET, Heterocapsaceae; PPE, Protoperidiniaceae)
EcoregionsTreeFinder – a global dataset documenting observations of 48,129 tree species in 828 terrestrial ecoregions
<p>Check this article for a description of the methods used to develop the EcoregionsTreeFinder. Together with the citation for this Zenodo archive, it is the suggested citation for the database.</p> <p>Kindt, R. and Pedercini, F. (2025), EcoregionsTreeFinder—A Global Dataset Documenting the Abundance of Observations of >45,000 Tree Species in 828 Terrestrial Ecoregions. Global Ecol Biogeogr, 34: e70064. <a href="https://doi.org/10.1111/geb.70064">https://doi.org/10.1111/geb.70064</a></p> <p>Use this shinyapp to filter native tree species for a particular ecoregion or to see ecoregions where a species is expected to be native: <a href="https://patspo.shinyapps.io/EcoregionsTreeFinder/" target="_blank" rel="noopener">https://patspo.shinyapps.io/EcoregionsTreeFinder/</a></p> <p> </p> <p>The database was created from observation records filtered from: GBIF.org (16 March 2021) GBIF Occurrence Download <a href="https://doi.org/10.15468/dl.77gcvq" target="_blank" rel="noopener">https://doi.org/10.15468/dl.77gcvq</a></p> <p> </p> <p><strong>Funding </strong></p> <p>Development of the EcoregionsTreeFinder was supported by the <strong>Bezos Earth Fund</strong> via the Quality Tree Seed for Africa project, by <strong>Norway's International Climate and Forest Initiative</strong> via the Provision of Adequate Tree Seed Portfolio in Ethiopia (PATSPO) project, by the <strong>Darwin Initiative</strong> via project DAREX001 of Developing a Global Biodiversity Standard certification for tree-planting and restoration, by the <strong>Green Climate Fund</strong> via the Readiness proposal Burkina Faso and TREPA projects, and by the <strong>International Climate Initiative</strong> via the Right Tree for the Right Place and Right Purpose (RTRPRP) project.</p> <p> </p>
Figs 129–132 in A revision of the spider genus Raveniola (Araneae, Nemesiidae). I. Species from Western Asia
Figs 129–132. Raveniola spp., ♂♂. Tibia and metatarsus I, retrolateral views. — 129. R. adjarica sp. nov. (holotype). 130. R. dunini sp. nov. (holotype). 131. R. hyrcanica Dunin, 1988 (holotype). 132. R. pontica (Spassky, 1937) (Lazarevskoe). Scale bars: 1.0 mm.
Figs 129–133 in The Southeast Asian Pholcus halabala species group (Araneae, Pholcidae): new data from field observations and ultrastructure
Figs 129–133. Pholcus kipungit Huber, sp. nov., ZFMK Ar 15042. 129–130. Left male palp, prolateral and retrolateral views. 131. Male chelicerae, frontal view. 132–133. Cleared female genitalia, ventral and dorsal views. Abbreviations: a = appendix; b = genital bulb; e = embolus; p = procursus; tr = trochanter; u = uncus. Scale lines: 0.3 mm (131–133), 0.5 mm (129–130).
Pseudonornoneura hirta (Coquillett), male genitalia: 129, ventral view; 130, dorsal view; 131, lateral view. in The American Genera of Mydidae (Diptera), with the Description of three new Genera and two new Species
Pseudonornoneura hirta (Coquillett), male genitalia: 129, ventral view; 130, dorsal view; 131, lateral view.
Figs 129–142 in Review of Aphidiinae parasitoids (Hymenoptera: Braconidae) of the Middle East and North Africa: key to species and host associations
Figs 129–142. Forewing (♀): 129. Lysiphlebus desertorum. 130. Lysiphlebus fabarum. 131. Lysiphlebus fritzmuelleri. 132. Lysiphlebus testaceipes. 133. Monoctonia pistaciaecola. 134. Monoctonia vesicarii. 135. Monoctonus crepidis. 136. Monoctonus mali. 137. Pauesia abietis. 138. Pauesia anatolica. 139. Pauesia antennata. 140. Pauesia cedrobii. 141. Pauesia hazratbalensis. 142. Pauesia picta.
Figs 129–130 in Revision of Netomocera Bouček (Hymenoptera: Chalcidoidea: Pteromalidae), excluding the Oriental species
Figs 129–130. Netomocera meridionalis sp. nov., allotype, ♂. 129. Habitus, lateral view. 130. Antenna. Scale bars: 0.2 mm.
Text-fig. 9. Sex estimation of Moča skull (Komárno district, southern Slovakia), linear discriminant analysis using Henke's Late Upper Palaeolithic and Mesolithic database (n = 129, f = 46, m = 83), as well as according to recent Howells's database (n = 2524, f = 1156, m = 1368) with variables M1 (GOL) and M45 (ZYB). in A Late Upper Palaeolithic Skull From Moča (The Slovak Republic) In The Context Of Central Europe
Text-fig. 9. Sex estimation of Moča skull (Komárno district, southern Slovakia), linear discriminant analysis using Henke's Late Upper Palaeolithic and Mesolithic database (n = 129, f = 46, m = 83), as well as according to recent Howells's database (n = 2524, f = 1156, m = 1368) with variables M1 (GOL) and M45 (ZYB).
Fig. 129. Bothremys cooki Leidy, 1865. AMNH 2521 holotype. A in EVOLUTION OF THE SIDE-NECKED TURTLES: THE FAMILIES BOTHREMYDIDAE, EURAXEMYDIDAE, AND ARARIPEMYDIDAE
Fig. 129. Bothremys cooki Leidy, 1865. AMNH 2521 holotype. A, dorsal; B, ventral; C, right lateral; D, anterior; E, left lateral; F, posterior. [F. Ippolito, del.]
TreeGOER Holdridge Life Zone Distributions: Observations for 48,129 tree species across 45 historical (1901-1920) and contemporary (1979-2013) terrestrial life zones
<p><strong>TreeGOER (Tree Globally Observed Environmental Ranges)</strong> is a database that documents the environmental ranges (minimum, maximum, median, mean and 5%, 25%, 75% and 95% quantiles) for 48,129 tree species and for 51 environmental variables, including 38 bioclimatic variables, 8 soil variables and 3 topographic variables. TreeGOER is available from the following Zenodo archives: <a href="https://doi.org/10.5281/zenodo.7922927">https://doi.org/10.5281/zenodo.7922927.</a></p> <p>The TreeGOER ranges were calculated after cleaning occurrence records and standardizing species names with the <a href="https://bsapubs.onlinelibrary.wiley.com/doi/10.1002/aps3.11388">WorldFlora</a> R package to <a href="https://onlinelibrary.wiley.com/doi/10.1002/tax.12373">World Flora Online</a> or the <a href="https://www.nature.com/articles/s41597-021-00997-6">World Checklist of Vascular Plants</a> for a global GBIF occurrence download of 44,267,164 occurrences (GBIF.org 2021 <strong>GBIF Occurrence Download</strong> <a href="https://doi.org/10.15468/dl.77gcvq">https://doi.org/10.15468/dl.77gcvq</a>). The process of compilation of TreeGOER with 30 arc-seconds global grid layers, two examples of BIOCLIM applications that investigated the effects of climate change on global tree diversity patterns and R scripts to repeat these analyses have been described by Kindt, R. (2023). <strong>TreeGOER: A database with globally observed environmental ranges for 48,129 tree species</strong>. Global Change Biology 29: 6303–6318. <a href="https://onlinelibrary.wiley.com/doi/10.1111/gcb.16914">https://onlinelibrary.wiley.com/doi/10.1111/gcb.16914</a>.</p> <p>This Zenodo archive documents the occurrence of the same previously compiled and cleaned observations for the TreeGOER across global raster layers that document the contemporary (1979-1920) and historical (1901-1920) distribution of 45 <strong>Terrestrial Life Zones</strong>. These global raster layers were created for the following article:</p> <ul> <li>Elsen, P. R., Saxon, E. C., Simmons, B. A., Ward, M., Williams, B. A., Grantham, H. S., Kark, S., Levin, N., Perez-Hammerle, K.-V., Reside, A. E., & Watson, J. E. M. (2022). Accelerated shifts in terrestrial life zones under rapid climate change. <em>Global Change Biology</em>, 28, 918–935. <a href="https://doi.org/10.1111/gcb.15962">https://doi.org/10.1111/gcb.15962</a></li> </ul> <p>and are <a href="https://datadryad.org/stash/dataset/doi:10.5061/dryad.41ns1rnff">available for download from DRYAD</a>:</p> <ul> <li>Elsen, Paul R.; Saxon, Earl C.; Simmons, B. Alexander; Ward, Michelle; Williams, Brooke A.; Grantham, Hedley S.; Kark, Salit; Levin, Noam; Perez-Hammerle, Katharina-Victoria; Reside, April E.; Watson, James E. M.; Perez‐Hammerle, Katharina‐Victoria. 2021. Data from: Accelerated shifts in terrestrial life zones under rapid climate change.<strong> </strong>Nov 05 2021 version files. <a href="https://doi.org/10.5061/dryad.41ns1rnff">https://doi.org/10.5061/dryad.41ns1rnff</a></li> </ul> <p>The raster layers were processed using <em>R</em> and <em>Google Earth Engine</em> following the methodology described in Elsen et al (<a href="https://doi.org/10.1111/gcb.15962">2022</a>). Documentation of the different zones are partially available from this README file: <a href="https://datadryad.org/stash/downloads/file_stream/1145694">https://datadryad.org/stash/downloads/file_stream/1145694</a></p> <p>For each of the 48,129 tree species, the distribution is given for:</p> <ul> <li>Contemporary climate: number of observations in life zones mapped by <a href="https://datadryad.org/stash/downloads/file_stream/1145680">https://datadryad.org/stash/downloads/file_stream/1145680</a></li> <li>Historical climate: number of observations in life zones mapped by <a href="https://datadryad.org/stash/downloads/file_stream/1145681">https://datadryad.org/stash/downloads/file_stream/1145681</a></li> <li>Mixed climate: number of observations for contemporary life zones if GBIF observations were from 1979 or later, and number of observations for historical life zones if GBIF observations were from before 1979</li> <li>Static climate: number of observations in the same zone in the contemporary and historical climate. The number of observations in areas where the life zone changed are listed in the variable of 'H-0'.</li> </ul> <p>Observations outside the life zone maps are listed in the variable of 'H-1'.</p> <p> </p> <p>The development of this data set archive supported by the <strong>Darwin Initiative</strong> to project DAREX001 of <em>Developing a Global Biodiversity Standard certification for tree-planting and restoration</em>, by <strong>Norway’s International Climate and Forest Initiative through the Royal Norwegian Embassy in Ethiopia</strong> to the <em>Provision of Adequate Tree Seed Portfolio</em> project in Ethiopia, by the <strong>Green Climate Fund</strong> through the IUCN-led <em>Transforming the Eastern Province of Rwanda through Adaptation</em> and through the <em>Readiness proposal on Climate Appropriate Portfolios of Tree Diversity for Burkina Faso</em> projects, by the <strong>Bezos Earth Fund</strong> to the <em>Quality Tree Seed for Africa in Kenya and Rwanda</em> project and by the <strong>German International Climate Initiative (IKI)</strong> to the regional tree seed programme on <em>The Right Tree for the Right Place for the Right Purpose in Africa</em>.</p>
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Allen Brain Atlas
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OpenNeuro
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