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67 results for “ASV”
16S Amplicon sequence variants (ASVs) data of NEREA Augmented Observatory
<p><strong>Metabarcoding - 16S ASV generation and taxonomic assignment</strong>. Raw 16S paired-end sequences were subjected to a data quality control step and subsequently imported into the QIIME2 pipeline v.2022.2.0. Leftover primers and adapter sequences were removed through cutadapt. The amplicon sequence variants (ASV) table, which represent true biological sequences within each sample, was generated using the denoised-paired method including truncation, denoising, dereplication, merging, and chimera filtering of the DADA2 (Divisive Amplicon Denoising Algorithm 2) plugin inside QIIME2. Default parameters were used with the exception of the forward and reverse sequence length (--p-trunc-len-f and --p-trunc-len-r), that were set to 220 and 180, respectively. Processed reads that passed all these filters were used for taxonomy classification. The V4-V5 regions were extracted from the pre-formatted reference sequences and taxonomy file built on the SILVA 138 99% OTUs database and the vsearch v.2.6.2 global alignment implemented in QIIME2 was used.</p>
ASVs of mature muds
<p>The Excel file contains a list of all the 16S rRNA sequences of Amplicon Sequence Variants (ASVs) obtained from<br>the NGS analysis. Each mature mud sample was analysed in duplicate, so the file names are the following: P-1: A66-A67;<br>P-4: A68-69; P-2: A70-A71; P-5: A72-A73; P-6: A74-75; P-3: A76-A77. Additionally, the spreadsheet includes ASVs<br>corresponding to the most abundant taxa and Cyanobacteria (with abundances higher than 0.01%). Taxa are grouped based<br>on the Phyla assigned by the pipeline.</p>
UNITY 1: A Study of an Investigational Treatment Regimen of Daclatasvir (DCV) + Asunaprevir (ASV) + BMS-791325 in a Fixed Dose Combination (the DCV 3DAA (Direct Acting Antiviral) Regimen) for 12 Weeks
ClinicalTrials.gov study NCT01979939. IPD Sharing: Not stated. Countries: 5. Publications: 1.
INTELLiVENT-ASV Using Mainstream Versus Sidestream End-Tidal CO2 Monitoring
ClinicalTrials.gov study NCT04599491. IPD Sharing: YES. Countries: 1. Publications: 1.
Phase III Hallmark QUAD: ASV+DCV+Peg+Rib (Nulls/Partials)
ClinicalTrials.gov study NCT01573351. IPD Sharing: Not stated. Countries: 15. Publications: 1.
Phase III Hallmark DUAL: ASV+DCV (Nulls/Partials, Intolerants/Ineligibles. Naives)
ClinicalTrials.gov study NCT01581203. IPD Sharing: Not stated. Countries: 18. Publications: 3.
ASV for Sleep Apnea After Myocardial Infarction
ClinicalTrials.gov study NCT02093377. IPD Sharing: Not stated. Countries: 1. Publications: 4.
PSV Versus ASV With Intellisync Mode for Delivery of NIV in AECOPD
ClinicalTrials.gov study NCT06160687. IPD Sharing: UNDECIDED. Countries: 1. Publications: 0.
Trial to Study Intubation Rates of Non-invasive Ventilation Using Pressure Support Ventilation (PSV) Versus Adaptive Support Ventilation (ASV) Mode in Patients With Acute Exacerbation of Chronic Obstr
ClinicalTrials.gov study NCT02877524. IPD Sharing: UNDECIDED. Countries: 1. Publications: 1.
UNITY 2: A Study of an Investigational Treatment Regimen of DCV+ASV+BMS-791325 in a Fixed Dose Combination (the DCV 3DAA (Direct Acting Antiviral) Regimen) With or Without RBV for 12 Weeks for the Tre
ClinicalTrials.gov study NCT01973049. IPD Sharing: Not stated. Countries: 4. Publications: 1.
Quality of Sleep of Patients With Predominant Central Sleep Apnea Syndrome(SAS) Whose EF > 45% Treated by ASV
ClinicalTrials.gov study NCT02835638. IPD Sharing: YES. Countries: 1. Publications: 1.
Non Invasive Ventilation With NAVA vs ASV for AECOPD
ClinicalTrials.gov study NCT04414891. IPD Sharing: NO. Countries: 1. Publications: 6.
ASV Effects on Myocardial Energetics and Sympathetic Nerve Function in Heart Failure and Sleep Apnea.
ClinicalTrials.gov study NCT02116140. IPD Sharing: Not stated. Countries: 1. Publications: 2.
Postoperative INTELLiVENT-ASV Ventilation
ClinicalTrials.gov study NCT03180203. IPD Sharing: NO. Countries: 1. Publications: 3.
Effect of ASV and DCV Therapy on the Quality of Immune Status in Chronic HCV Patients
ClinicalTrials.gov study NCT02282709. IPD Sharing: Not stated. Countries: 1. Publications: 1.
I-ASV in Cardiac Surgery
ClinicalTrials.gov study NCT06178510. IPD Sharing: UNDECIDED. Countries: 1. Publications: 1.
Effect of Adaptive Servo Ventilation (ASV) on Survival and Hospital Admissions in Heart Failure
ClinicalTrials.gov study NCT01128816. IPD Sharing: Not stated. Countries: 9. Publications: 3.
ASV output data for all in the details: A first assessment for the viability of metabarcoding in diet composition analysis of African wild dogs (Lycaon pictus)
Open the record for dataset details and reuse information.
ASVs detected in the microbiome of marine invertebrates.
<p>Data table.</p>
ASV Table 2
<p>Rarefied ASV table including bentonite samples. </p>
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