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90 results for “Alanine”
Oral β-Alanine Supplementation in Patients With COPD
ClinicalTrials.gov study NCT02770417. IPD Sharing: UNDECIDED. Countries: 1. Publications: 1.
Safety Analysis of Chronic Intake of a β-alanine Supplement
ClinicalTrials.gov study NCT05334121. IPD Sharing: Not stated. Countries: 1. Publications: 1.
β-Alanine for Kickboxing Anaerobic Performance
ClinicalTrials.gov study NCT07319052. IPD Sharing: UNDECIDED. Countries: 1. Publications: 0.
Explaining reaction coordinates of alanine dipeptide isomerization obtained from deep neural networks using Explainable Artificial Intelligence (XAI)
<p>This repository includes the input and output dataset, and python scripts used in the article, "Explaining reaction coordinates of alanine dipeptide isomerization obtained from deep neural networks using Explainable Artificial Intelligence (XAI)," of J. Chem. Phys. 156, 154108 (2022) [DOI: <a href="http://doi.org/10.1063/5.0087310">10.1063/5.0087310</a>] The repository also includes source data of figures in the article.</p>
Atomistic Predictions and Network-Based Allosteric Analysis of Conformational Ensembles for the State-Switching ABL Kinase Mutants Using Combination of Alanine Sequence Scanning and Shallow Subsampling in AlphaFold2
Open the record for dataset details and reuse information.
Molecular mechanisms of regulation by a β-alanine-responsive Lrp-type transcription factor from Acidianus hospitalis
<p>This dataset contains the raw data that lie at the basis of the results discussed in <strong>Chapter 5: Molecular mechanisms of regulation by a β-alanine-responsive Lrp-type transcription factor from Acidianus hospitalis </strong>of the PhD thesis of Amber Bernauw. This chapter is also published as an article at MicrobiologyOpen (<a href="https://doi.org/10.1002/mbo3.1356">https://doi.org/10.1002/mbo3.1356</a>).</p>
The Effects of 4 Week β-alanine Supplementation on Knee Extensor Contractile and Force Properties in the Over 60s
ClinicalTrials.gov study NCT03111979. IPD Sharing: NO. Countries: 0. Publications: 4.
Brivanib Alaninate in Treating Patients With Recurrent or Persistent Endometrial Cancer
ClinicalTrials.gov study NCT00888173. IPD Sharing: Not stated. Countries: 1. Publications: 0.
β-alanine Supplementation on Knee Extensor Contractile and Force Properties
ClinicalTrials.gov study NCT02819505. IPD Sharing: NO. Countries: 0. Publications: 5.
A Study to Compare Tenofovir DF Versus the Combination of Emtricitabine Plus Tenofovir DF for the Treatment of Chronic Hepatitis B in Patients With Normal Alanine Aminotransferase (ALT)
ClinicalTrials.gov study NCT00507507. IPD Sharing: Not stated. Countries: 11. Publications: 0.
A Quality of Life Study of Peginterferon-Alfa-2a Plus Ribavirin in Participants With Chronic Hepatitis C and Persistently Normal Alanine Transaminase (ALT) Levels
ClinicalTrials.gov study NCT02726022. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Transcriptional response of Corynebacterium glutamicum C1 to 3 mM indole-alanine dipeptide
GEO Series GSE159888. Corynebacterium glutamicum. 6 samples. Type: Expression profiling by high throughput sequencing.
Alanine scan of potential linear epitopes of Klebsiella pneumoniae MGH 78578
GEO Series GSE60588. Klebsiella pneumoniae. 12 samples. Type: Protein profiling by protein array.
RNA sequencing analysis for keratinocytes treated with U1 dsRNA and LL34 Alanine Scan Peptides
GEO Series GSE168050. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Efficient suppression of premature termination codons with alanine by engineered chimeric pyrrolysine tRNAs [Ribo-Seq]
GEO Series GSE277130. Homo sapiens. 4 samples. Type: Other.
Mutation of histone H3 serine 28 to alanine influences H3K27me3-mediated gene silencing in Arabidopsis thaliana
GEO Series GSE197502. Arabidopsis thaliana. 38 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Spatial alanine metabolism determines local growth dynamics of Escherichia coli colonies
GEO Series GSE175768. Escherichia coli. 48 samples. Type: Expression profiling by high throughput sequencing.
RqcH and RqcP catalyze processive poly-alanine synthesis
GEO Series GSE174254. Enterococcus faecalis; Bacillus subtilis subsp. subtilis str. 168. 19 samples. Type: Non-coding RNA profiling by array.
Gene expression effects of PPAR-gamma serine 273 to alanine knock-in mutation in epididymal white adipose tissue
GEO Series GSE151030. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Towards Molecular Musical Instruments: Interactive Sonifications of 17-Alanine, Graphene and Carbon Nanotubes
<p><strong>Supplementary materials for the paper:</strong></p> <p>Thomas J. Mitchell, Alex J. Jones, Michael B. O’Connor, Mark D. Wonnacott, David R. Glowacki, and Joseph Hyde. 2020. Towards Molecular Musical Instruments: Interactive Sonifications of 17-Alanine, Graphene and Carbon Nanotubes. In Proceedings of the 15th International Audio Mostly Conference (AM’20), September 15–17, 2020, Graz, Austria. ACM, New York, NY, USA, 8 pages. <a href="https://gate.sc/?url=https%3A%2F%2Fdoi.org%2F10.1145%2F3411109.3411143&token=4f57ce-1-1596010611306">doi.org/10.1145/3411109.3411143</a></p> <p><strong>17-Alanine.mov:</strong></p> <p>Video was created by Alex J. Jones at the University of Bristol</p> <p>An immersive and interactive VR view of simulated 17-Alanine molecule with accompanying sonification.</p> <p><strong>GrapheneMusic.aif:</strong></p> <p>Composed by Joseph Hyde (<a href="https://gate.sc/?url=https%3A%2F%2Fwww.josephhyde.co.uk%2F&token=21d2c3-1-1596010611306">www.josephhyde.co.uk/</a>)</p> <p><strong>Example1.wav:</strong></p> <p>Molecule: 17-Alanine<br> Friction: 60<br> Timestep: 0.5<br> A: 0.1 D: 0.1 S: 1 R: 3<br> Wavetable Method: Relative<br> Note: C3<br> Velocity: 127<br> Temperature: 5<br> Automation: None</p> <p><strong>Example2. wav:</strong></p> <p>Molecule: 17-Alanine<br> Temperature: various<br> Friction: 60<br> Timestep: 0.5<br> Note: C3<br> Velocity: 127<br> A: 0.1 D: 0.1 S: 1 R: 3<br> Wavetable Method: Relative<br> Automation: Temperature</p> <p><strong>Example3.wav:</strong></p> <p>Molecule: 17-Alanine<br> Temperature: various<br> Friction: 100<br> Timestep: 0.78<br> Note: C3<br> Velocity: 127<br> A: 0.1 D: 0.1 S: 1 R: 0.5<br> Wavetable Method: Relative<br> Automation: Temperature</p>
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.