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238 results for “Atmospheric Model”

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zenodo44/100

Sonora 2018: Cloud-free, solar composition, solar C/O substellar atmosphere models and spectra

<p>These models for non-irradiated, substellar mass objects belong to the Sonora 2018 model series, to be described in Marley et al., currently in preparation for submission&nbsp;to Astrophysical Journal.</p> <p>This particular set of model atmosphere structures and associated spectra are for cloudless, solar metallicity, solar C/O ratio objects (relative to Lodders (2010) abundances) with&nbsp;<span class="math-tex">\(3.25 \le \log g \le 5.5\)</span>&nbsp;and&nbsp;<span class="math-tex">\(200 \le T_{\rm eff} \le 2400\,\rm K.\)</span>&nbsp;&quot;Rainout&quot; chemical equilibrium is assumed. Spectra describe the emergent flux from the top of the atmosphere of the object, units in file header. Profiles give temperature and pressure through the model radiative-convective equilibrium structure. Volume mixing ratios for a few gasses of interest are also tabulated. Additional gas species are included in the calculation.</p> <p>Filename specifies&nbsp;<span class="math-tex">\(T_{\rm eff}\)</span>&nbsp;and gravity (in mks units).&nbsp;</p> <p>&quot;co1.0&quot; in version and spectra header nomenclature refers to 1.0 times the solar C/O ratio. Y is the He mass fraction. f_hole is a cloud parameter for cloudy models, not relevant to these cloudless models.</p> <p>The two &quot;flux table&quot; files give fluxes, in mJy, for various standard filter bandpasses of interest for each model case.</p> <p>&nbsp;</p> <p>&nbsp;</p> <p>&nbsp;</p>

opencc-by-4.0Jul 2018View details →
zenodo44/100

Using variable-resolution grids to model precipitation from atmospheric rivers around the Greenland ice sheet

<p>This dataset can be used to reproduce the figures created in Waling et al. 2024, "Using variable-resolution grids to model precipitation from atmospheric rivers around the Greenland ice sheet." Each figure has its own script which can be executed.<br><br></p>

opencc-by-4.0Sep 2024View details →
zenodo44/100

The third Met Office Unified Model-JULES Regional Atmosphere and Land configuration, RAL3

<p>Supporting data for figures in GMD draft paper: The third Met Office Unified Model-JULES Regional Atmosphere and Land configuration, RAL3</p>

opencc-by-4.0Oct 2024View details →
zenodo44/100

Global 32-4 km variable-resolution mesh for the MPAS-Atmosphere model

<div> <div> <div>This mesh was created by a collaboration between the Department of Energy&rsquo;s Water Cycle and Climate Extremes Modeling (WACCEM) project and the</div> <div>Mesoscale and Microscale Meteorology (MMM) Laboratory at the National Science Foundation National Center for Atmospheric Research (NSF/NCAR).</div> <div>&nbsp;</div> <div>The mesh contains 1,830,914 horizontal grid cells. The circular refinement region has a radius of approximately 20 degrees. The 4-32km grid-spacing range aims to achieve convection-permitting resolution in the high-resolution domain and resolution sufficient for the jet stream and mid-latitude wave activities (Lu et al., 2015) in the low-resolution domain.</div> <div>&nbsp;</div> <div>The netcdf file "x8.1830914.grid.nc" includes the variables defining the global unstructured grid for the MPAS model as described in the <a href="https://mpas-dev.github.io/files/documents/MPAS-MeshSpec.pdf">MPAS Mesh Specification</a>. Following the other MPAS mesh data, we provide graph.info.part.* files necessary for the Message Passing Interface (MPI) parallelism. For example, a simulation using 1024 MPI ranks will use graph.info.part.1024.&nbsp;For the number of MPI tasks not provided in this dataset, a user needs to create a new partitioning file using the METIS tool and the graph.info file as described in the MPAS user guide (available <a href="https://mpas-dev.github.io/atmosphere/atmosphere_download.html" target="_blank" rel="noopener">here</a>).</div> <div>&nbsp;</div> </div> </div> <div>This data will also be available from the&nbsp;<a href="https://mpas-dev.github.io/atmosphere/atmosphere_meshes.html">MPAS mesh website</a>.</div> <div>&nbsp;</div> <div>The mesh generation is supported by the U.S. Department of Energy Office of Science Biological and Environmental Research (BER) as part of the Regional and Global Model Analysis Program Area. We acknowledge the use of computational resources of the National Energy Research Scientific Computing Center (NERSC). The Pacific Northwest National Laboratory is operated for the Department of Energy by Battelle Memorial Institute under contract DE-AC05-76RL01830.</div>

opencc-by-4.0Oct 2024View details →
zenodo44/100

Atmospheric clumped O2 isotope composition simulation data and analysis scripts from EMAC/aMC models

<p>This publication contains source code, data and analysis scripts/results of the simulations presented in the following manuscript:</p> <blockquote> <p>Laskar, A.H., G.A. Adnew, S.S. Gromov, R. Peethambaran, B. Steil, J. Lelieveld, T. Blunier and T. R&ouml;ckmann (2022). &quot;Large variations in atmospheric oxidants and temperature during the Holocene&quot; (in review)</p> </blockquote> <p>&nbsp;</p> <p><strong>EMAC simulations analysis</strong></p> <p>The analysis contains integrals of species burdens and other atmospheric physicochemical parameters obtained with the clumped isotopes of oxygen (CIO)-enabled ECHAM/MESSy Atmospheric Chemistry model (EMAC, see <a href="https://www.messy-interface.org">MESSy consortium website</a> for more information) model in various climate states. Simulations were performed in 2021&ndash;2022 at the <a href="https://www.dkrz.de">German Climate Computing Centre</a> (DKRZ) with the support of the <a href="https://www.palmod.de">PalMod project</a>.</p> <p>Analysis data is stored in human/machine-readable file <code>D36-EMAC-analysis.dat</code>, please refer to its header for variables description, etc.</p> <p>Additional (to those presented in the manuscript) analysis plots from EMAC data analysis are available in <code>D36-EMAC-analysis.vsz</code> (see the hardcopy in <code>D36-EMAC-analysis.pdf</code>) prepared using the <a href="https://veusz.github.io">Veusz</a> software.</p> <p>&nbsp;</p> <p><strong>2BM/MC (two-box Monte-Carlo) model code, simulation data and analysis</strong></p> <p>2BM/MC code/simulation setup is implemented within the advanced Monte-Carlo framework (aMC) and is available in the <a href="https://gitlab.com/sergey.gromov/amc/-/tree/vpCIO">respective repository</a>. A copy of the source code used to perform simulations is provided here (see <code>aMC-vpCIO.tar.gz</code> archive).</p> <p>2BM/MC output is stored in the <a href="https://www.unidata.ucar.edu/software/netcdf/">netCDF format</a> (ver. 4) and can be read in by any compatible software. The output contains probe statistics (reference <em>probed</em> distributions of the variables) in <code>vpCIO-probe_stat-*.nc</code> and resulting statistics (distributions <em>matching</em> given criteria, i.e. changes to the &Delta;36 signature vs. PD conditions) in <code>vpCIO-delta-*.nc</code> files, respectively.</p> <p>We use <a href="https://ferret.pmel.noaa.gov">NOAA Ferret</a> software to derive additional statistics of the third parameter (viz. average STE (<em>S</em>) changes) over the obtained 2D frequency histograms of other parameters (viz. changes to equilibration rate (<em>Req)</em> and temperature (<em>Teq</em>)). The scripts exemplifying this calculation are presented in <code>D36-vpCIO-analysis__proc*</code> files, which output results/overview plots in <code>vpCIO-delta-*__proc.nc</code> and <code>vpCIO-delta-*.gif</code> files.</p> <p>The analysis of the 2BM/MC simulation is available in <code>D36-vpCIO-analysis.vsz</code> script (see the hardcopy in <code>D36-vpCIO-analysis.pdf</code>) prepared using the <a href="https://veusz.github.io">Veusz</a> software. Note that some plots require the abovementioned third-parameter statistics as input.</p> <p><strong>Performing simulations with 2BM/MC</strong></p> <p>In order to perform simulations (e.g. with altered parameters), please follow the <a href="https://gitlab.com/sergey.gromov/amc/-/tree/vpCIO#integrating-your-code-building-executing">respective guide</a>&nbsp;for and build the <code>aMC-vpCIO</code> model. A typical sequence of shell commands to build and run 2BM/MC (which is referred to as <code>vpCIO</code> generic model within the <code>aMC</code>) is:</p> <pre><code># clone the distribution and check-out `vpCIO` branch or particular commit referenced in the repository history [user@pc]/~&gt; git clone https://gitlab.com/sergey.gromov/amc.git [user@pc]/~&gt; cd amc [user@pc]/~/amc&gt; git checkout vpCIO # or unpack the source code available in this publication: [user@pc]/~&gt; tar -xvf `aMC-vpCIO.tar.gz` [user@pc]/~&gt; cd amc # build the aMC/vpCIO model executable # (note that you need at least a GCC or Intel compiler suite and respective netCDF v.4 library Fortran interface available in your environment): [user@pc]/~/amc&gt; make vpCIO # adjust model setup (see the `vpCIO/amc.nml` namelist) ... # perform simulation [user@pc]/~/amc&gt; cd vpCIO [user@pc]/~/amc/vpCIO&gt; ./xamc # calculate additional statistics/produce overview with NOAA Ferret: [user@pc]/~/amc/vpCIO&gt; ferret -gif -script D36-vpCIO-analysis__proc.jnl MH [user@pc]/~/amc/vpCIO&gt; ./D36-vpCIO-analysis__proc</code></pre> <p>Note that output files contain the build timestamp and repository commit hash for the code used in the simulation, e.g.:</p> <pre><code>[user@pc]/~/amc/vpCIO&gt; ncdump -h ./vpCIO-delta-dMH.nc | grep 'build' :build = "vpCIO@https://gitlab.com/sergey.gromov/amc__aMC_v1.9-110-g2566229@2022-12-09T16:43:12+01:00__built@2022-12-09T16:48:03+01:00__&lt;user&gt;@&lt;email.com&gt;" ;</code></pre> <p>&nbsp;</p> <p>Please contact Sergey Gromov ( sergey.gromov (at) mpic.de ) for additional information and access to the original experiment data.</p> <p>&nbsp;</p>

opencc-by-4.0Dec 2022View details →
zenodo44/100

Dynamically coupled kinetic chemistry in brown dwarf atmospheres I. Performing global scale kinetic modelling

<p>Gifs and Exo-FMS GCM output from the 3D brown dwarf atmospheric simulations in&nbsp;Lee, Tan and Tsai (2023).&nbsp;</p> <p>Animated&nbsp;gifs for each effective temperature (Teff - first number in filename)&nbsp;of the brown dwarf (OLR and CH4 VMR). The gifs frames are every hour of simulation for 4 simulated days.</p> <p>Exo-FMS GCM output in netCDF format containing the 3D T-p structure&nbsp;and chemical results from the coupled mini-chem and GCM model for each Teff simulation (number in filename).</p> <p>`average&#39; is the averaged output of the last 100 days.</p> <p>`daily&#39; is the snapshot at the end of the simulation.</p>

opencc-by-4.0Apr 2023View details →
zenodo44/100

Products and Models for "Detection of carbon monoxide's 4.6 micron fundamental band structure in WASP-39b's atmosphere with JWST NIRSpec G395H"

<p>Overview:</p> <p>Carbon monoxide (CO) is predicted to be the dominant carbon-bearing molecule in giant planet atmospheres, and, along with water, is important for discerning the oxygen and therefore carbon-to-oxygen ratio of these planets. The fundamental absorption mode of CO has a broad double-branched structure composed of many individual absorption lines from 4.3 to 5.1 &nbsp;&micro;m, which can now be spectroscopically measured with JWST. Here we present a technique for detecting the rotational sub-band structure of CO at medium resolution with the NIRSpec G395H instrument. We use a single transit observation of the hot Jupiter WASP-39b from the JWST Transiting Exoplanet Community Early Release Science (JTEC ERS) program at the native resolution of the instrument (R ~ 2700) to resolve the CO absorption structure. We robustly detect absorption by CO, with an increase in transit depth of 264&nbsp;<span>\(\pm\)</span> 68 ppm, in agreement with the predicted CO contribution from the best-fit model at low resolution. This detection confirms our theoretical expectations that CO is the dominant carbon-bearing molecule in WASP-39b&#39;s atmosphere, and further supports the conclusions of low C/O and super-solar metallicities presented in the JTEC ERS papers for WASP-39b.&nbsp;</p>

opencc-by-4.0Apr 2023View details →
zenodo40/100

Dataset for "Atmospheric oxygen isotopic fractionation in clouds: a bin–resolved microphysics model approach"

<p>This dataset contains the raw model outputs for the paper titled &quot;Atmospheric oxygen isotopic fractionation in clouds: a bin&ndash;resolved microphysics model approach&quot; by Thibault Hiron and Andrea Flossmann.</p> <p>The structure of the data and the explaination for the filenames are to be found in the ReadMe.txt file.</p>

opencc-by-4.0Oct 2019View details →
zenodo40/100

Data set associated to the publication "An active source seismo-acoustic experiment using tethered balloons to validate instrument concepts and modelling tools for atmospheric seismology"

<p>Data set of the scientific publication entitled &quot;An active source seismo-acoustic experiment using tethered balloons to validate instrument concepts and modelling tools for atmospheric seismology&quot;:</p> <p>Seismological sensors</p> <p>Microphones</p> <p>Barometers</p> <p>Accelerometers</p> <p>Detailed test report.</p>

opencc-by-4.0Oct 2020View details →
zenodo40/100

The Sonora Substellar Atmosphere Models. IV. Elf Owl: Atmospheric Mixing and Chemical Disequilibrium with Varying Metallicity and C/O Ratios (T- type Models)

<ul> <li><strong>Overview of V2: "The Sonora Substellar Atmosphere Models. V: A Correction to the Disequilibrium Abundance of CO2 for Sonora Elf Owl"</strong></li> </ul> <p>&nbsp; &nbsp; &nbsp; &nbsp; &nbsp;Version 2 of the Sonora Elf Owl Models updates the CO2 and PH3 abundances and spectra. As described in the Wogan et al. (2024) research note (URL OF NOTE GOES HERE), Version 1 of the models did not apply the CO2 quench approximation properly resulting in predicted CO2 abundances that were too small by several orders of magintude in some cases. Version 2 fixes this mistake, updating CO2 abundances and the emission spectra to reflect the new CO2 abundances. Version 2 also removes all spectra contributions of PH3 because Version 1 consistently contained too much PH3 absorption when compared to JWST data (Veiler et al. 2024, <a href="http://doi.org/10.3847/1538-4357/ad6759" target="_blank" rel="noopener noreferrer">http://doi.org/10.3847/1538-4357/ad6759</a>).</p> <p>&nbsp;</p> <ul> <li><strong>Overview of V1</strong></li> </ul> <p>&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; The Sonora Elf Owl Models is a successor to the <a href="../records/5063476#:~:text=This%20particular%20set%20of%20model,g%20are%200.25%20or%200.5.">Sonora Bobcat</a> and <a href="../records/4450269">Sonora Cholla</a> models. The Sonora Elf Owl model grid includes cloud-free radiative-convective equilibrium model atmospheres with vertical mixing induced disequilibrium chemistry with sub-solar to super-solar atmospheric metallicities and Carbon-to-Oxygen ratio. The atmospheric models have been computed using the open-source radiative-convective equilibrium model <a href="https://natashabatalha.github.io/picaso/">PICASO</a>. The parameters included within this grid are effective temperature (<strong><em>Teff</em></strong>), gravity (<strong><em>log(g)</em></strong>), vertical eddy diffusion coefficient (<strong><em>log(Kzz)</em></strong>), atmospheric metallicity (<strong><em>[M/H]</em></strong>), and Carbon-to-Oxygen ratio (<strong><em>C/O</em></strong>).</p> <p>The ranges and increments of these parameters are described in the published paper.<br><br></p> <ul> <li><strong>Three grids available on three links</strong></li> </ul> <p><strong>&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; The model grid has been presented using three Zenodo repositories. This repository has all the models between 575 to 1200 K (applicable for T- type objects). The models for Teff between 275 to 550 K (applicable for Y- type objects) are available in the Zenodo DOI :- <a href="../records/10381250">https://zenodo.org/records/10381250</a>. The models for Teff between 1300 to 2400 K (applicable for L- type objects) are available in the Zenodo DOI :- <a href="../records/10385987">https://zenodo.org/records/10385987</a>.</strong></p> <p>&nbsp;</p> <ul> <li><strong>&nbsp;File types and how to use them</strong></li> </ul> <p>&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; The models have been presented in the Xarray format so that all the atmospheric properties including the T(P) profile, atmospheric chemistry, and thermal emission spectra can be accessed within the same files. A python based Jupyter notebook named "Reading and plotting Elf Owl Models.ipynb" has been also supplied which demonstrates how to open and use these files.</p> <ul> <li>&nbsp; <strong>Spectra</strong></li> </ul> <p>&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; The emission spectra for each atmospheric model has been computed between 0.6 to 15 microns. The reported flux is in the units of erg/s/cm<sup>2</sup>/cm. Note that these fluxes need to be multiplied with R<sup>2</sup>/D<sup>2</sup>&nbsp; before comparing them with the typically observed flux of brown dwarfs/exoplanets. R is the radius of the object, and D is the distance here.</p> <div>&nbsp;</div> <div> <ul> <li><strong>Note on CH4</strong></li> </ul> </div> <p>&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp;As stated in <a href="https://ui.adsabs.harvard.edu/abs/2023ApJ...942...71M/abstract">Mukherjee et al. 2023 </a>our CH4 opacity is derived using the <a href="https://iopscience.iop.org/article/10.3847/1538-4365/ab7a1a">Hargreaves et al. 2020</a> HITEMP line list and computed using the HAPI code (<a href="https://www.sciencedirect.com/science/article/abs/pii/S0022407315302466">Kochanov et al. 2016</a>). HAPI automatically pre-weights the isotopologues according to earth abundances that are listed on the HITRAN website (<a href="https://hitran.org/lbl/2?6=on" target="_blank" rel="noopener noreferrer">see here for CH4</a>). Therefore, users should note that there will be minor features of CH3D included in the models. Given the general absence of deuterated molecules in brown dwarfs&nbsp; (Teff&gt;~300) we will include a second posting of models which includes the Elf Owl grid with <strong>only</strong>&nbsp;the major CH4 isotopologue (12C-H4).</p> <div> <ul> <li><strong>Note on PH3</strong></li> </ul> </div> <p>&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; PH3 abundance is treated separately from the general disequilibrium scheme. This is because of the current non-detection of PH3 in many brown dwarf atmospheres (see citations in paper). The current PH3 treatment uses the chemical equilibrium treatment described in Visscher et al. However, after publishing this grid and using the model for analysis of high precision JWST data, we noticed that even the simple chemical equilibrium treatment which reduces the abundance, introduces a noticeable PH3 feature. Therefore in our v2 of this model grid we will further diminish the abundance.</p>

opencc-by-4.0Dec 2023View details →
zenodo40/100

The Sonora Substellar Atmosphere Models. IV. Elf Owl: Atmospheric Mixing and Chemical Disequilibrium with Varying Metallicity and C/O Ratios (L- type Models)

<ul> <li><strong>Overview of V2: "The Sonora Substellar Atmosphere Models. V: A Correction to the Disequilibrium Abundance of CO2 for Sonora Elf Owl"</strong></li> </ul> <p>&nbsp; &nbsp; &nbsp; &nbsp; &nbsp;Version 2 of the Sonora Elf Owl Models updates the CO2 and PH3 abundances and spectra. As described in the Wogan et al. (2024) research note (URL OF NOTE GOES HERE), Version 1 of the models did not apply the CO2 quench approximation properly resulting in predicted CO2 abundances that were too small by several orders of magintude in some cases. Version 2 fixes this mistake, updating CO2 abundances and the emission spectra to reflect the new CO2 abundances. Version 2 also removes all spectra contributions of PH3 because Version 1 consistently contained too much PH3 absorption when compared to JWST data (Veiler et al. 2024, <a href="http://doi.org/10.3847/1538-4357/ad6759" target="_blank" rel="noopener noreferrer">http://doi.org/10.3847/1538-4357/ad6759</a>).</p> <p>&nbsp;</p> <ul> <li><strong>Overview of V1</strong></li> </ul> <p>&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; The Sonora Elf Owl Models is a successor to the <a href="../records/5063476#:~:text=This%20particular%20set%20of%20model,g%20are%200.25%20or%200.5.">Sonora Bobcat</a> and <a href="../records/4450269">Sonora Cholla</a> models. The Sonora Elf Owl model grid includes cloud-free radiative-convective equilibrium model atmospheres with vertical mixing induced disequilibrium chemistry with sub-solar to super-solar atmospheric metallicities and Carbon-to-Oxygen ratio. The atmospheric models have been computed using the open-source radiative-convective equilibrium model <a href="https://natashabatalha.github.io/picaso/">PICASO</a>. The parameters included within this grid are effective temperature (<strong><em>Teff</em></strong>), gravity (<strong><em>log(g)</em></strong>), vertical eddy diffusion coefficient (<strong><em>log(Kzz)</em></strong>), atmospheric metallicity (<strong><em>[M/H]</em></strong>), and Carbon-to-Oxygen ratio (<strong><em>C/O</em></strong>).</p> <p>The ranges and increments of these parameters are described in the published paper.<br><br></p> <ul> <li><strong>Three grids available on three links</strong></li> </ul> <p><strong>&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; The model grid has been presented using three Zenodo repositories. This repository has all the models between 1300 to 2400 K (applicable for L- type objects). The models for Teff between 275 to 550 K (applicable for Y- type objects) are available in the Zenodo DOI :- <a href="../records/10381250">https://zenodo.org/records/10381250</a>. The models for Teff between 575 to 1200 K (applicable for T- type objects) are available in the Zenodo DOI :- <a href="../records/10385821">https://zenodo.org/records/10385821</a>.</strong></p> <p>&nbsp;</p> <ul> <li><strong>&nbsp;File types and how to use them</strong></li> </ul> <p>&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; The models have been presented in the Xarray format so that all the atmospheric properties including the T(P) profile, atmospheric chemistry, and thermal emission spectra can be accessed within the same files. A python based Jupyter notebook named "Reading and plotting Elf Owl Models.ipynb" has been also supplied which demonstrates how to open and use these files.</p> <ul> <li>&nbsp; <strong>Spectra</strong></li> </ul> <p>&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; The emission spectra for each atmospheric model has been computed between 0.6 to 15 microns. The reported flux is in the units of erg/s/cm<sup>2</sup>/cm. Note that these fluxes need to be multiplied with R<sup>2</sup>/D<sup>2</sup>&nbsp; before comparing them with the typically observed flux of brown dwarfs/exoplanets. R is the radius of the object, and D is the distance here.</p> <div>&nbsp;</div> <div> <ul> <li><strong>Note on CH4</strong></li> </ul> </div> <p>&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp;As stated in <a href="https://ui.adsabs.harvard.edu/abs/2023ApJ...942...71M/abstract">Mukherjee et al. 2023 </a>our CH4 opacity is derived using the <a href="https://iopscience.iop.org/article/10.3847/1538-4365/ab7a1a">Hargreaves et al. 2020 </a>HITEMP line list and computed using the HAPI code (<a href="https://www.sciencedirect.com/science/article/abs/pii/S0022407315302466">Kochanov et al. 2016</a>). HAPI automatically pre-weights the isotopologues according to earth abundances that are listed on the HITRAN website (<a href="https://hitran.org/lbl/2?6=on" target="_blank" rel="noopener noreferrer">see here for CH4</a>). Therefore, users should note that there will be minor features of CH3D included in the models. Given the general absence of deuterated molecules in brown dwarfs&nbsp; (Teff&gt;~300) we will include a second posting of models which includes the Elf Owl grid with <strong>only</strong>&nbsp;the major CH4 isotopologue (12C-H4).</p> <div> <ul> <li><strong>Note on PH3</strong></li> </ul> </div> <p>&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; In v1, PH3 abundance was treated separately from the general disequilibrium scheme. This is because of the current non-detection of PH3 in many brown dwarf atmospheres (see citations in paper). The current PH3 treatment uses the chemical equilibrium treatment described in Visscher et al. However, after publishing this grid and using the model for analysis of high precision JWST data, we noticed that even the simple chemical equilibrium treatment which reduces the abundance, introduces a noticeable PH3 feature. In v2 we completely remove the contribution of PH3.&nbsp;</p>

opencc-by-4.0Dec 2023View details →
zenodo40/100

1-km high resolution model outputs using the WRF and WRF-Hydro model Raw data from the manuscipt "Process-based Atmosphere-Hydrology-Malaria Modeling: Performance for Spatio-temporal Malaria Transmission Dynamics in Sub-Saharan Africa "

<p>Here we provide the model outputs from the numerical climate model WRF (Weather Research and Forecasting) and its hydrological coupled model WRF-Hydro for the Health and Demographic Surveillance Systems (HDSS) site regions of Nouna in Burkina Faso. Model results are used for investigating the influence of surface hydrology representation, environmental and climate-sensitive driver factors on malaria incidence.<br>The experiments use the following model configuration: 1km horizontal resolution with 200*200 grid points, WSM6 microphysics, ACM2 PBL, and RRTM &amp; Dudhia radiation scheme. WRF uses the Noah LSM, and WRF-Hydro uses the Noah LSM with enhanced lateral hydrological description (https://ral.ucar.edu/projects/wrf_hydro/overview). These simulations were conducted in the Karlsruhe Steinbuch Centre for Computing (SCC) Horeka.</p> <p>Model outputs are provided in daily step (originally derived from the hourly output). Filename with "wrf-hydro_pr_2000-2020_d02-1km.nc" provides Precipitation,<br>n mm/day"wrf-hydro_tas_2000-2020_d02-1km.nc" provides mean temperature in Celsius, "wrf-hydro_tasmax_2000-2020_d02-1km.nc" provides maximum temperature in Celsius, "wrf-hydro_tasmin_2000-2020_d02-1km.nc" provides minmum temperature in Celsius, "wrf-hydro_dtr_2000-2020_d02-1km.nc" provides diurnal temperature ranges in Celius, "wrf-hydro_rh_2000-2020_d02-1km.nc" provides relative humudity in % and "wrf-hydro_sw_2000-2020_d02-1km.nc" provides the surface hydrology.</p>

opencc-by-4.0Mar 2024View details →
zenodo40/100

High-resolution simulations of Mediterranean windstorm Adrian with the Meso-NH atmospheric model

<p>The dataset provides numerical simulations of Mediterranean windstorm Adrian of 29 October 2018 at two horizontal resolutions and using different representations of surface turbulent fluxes at the air-sea interface. The simulations are run with the Meso-NH non-hydrostatic mesoscale atmospheric model of the French research community, version 5.4, freely available under CeCILL-C license agreement: <a href="http://mesonh.aero.obs-mip.fr/" target="_blank" rel="noopener">http://mesonh.aero.obs-mip.fr/</a></p> <p>The data is formatted in Network Common Data Form (NetCDF) using the CF Metadata Conventions and standard Meso-NH names for physical variables. The data files are named as following: <strong>EXP.N.CONTENT.nc</strong></p> <ul> <li><strong>EXP</strong> describes the numerical experiment (name of the parameterization of surface turbulent fluxes or their absence)&nbsp;</li> <li><strong>N</strong> the horizontal resolution (1=1000m, mesoscale simulation; 2=200m, large-eddy simulation)&nbsp;</li> <li><strong>CONTENT</strong> the type of data (3D zoom over the windstorm center or vertical profiles in the same area at 1530 UTC, or 2D surface fields every 6 min from 12 to 18 UTC)</li> </ul>

opencc-by-4.0Apr 2024View details →
zenodo40/100

WP2: Photochemical model of planetary atmospheres driven by high-energy stellar irradiation

<p>Modeling results of irradiated planetary&nbsp;atmospheres (Locci et al. 2021, <em>Extreme&nbsp;Ultraviolet&nbsp;and&nbsp;X-ray&nbsp;Driven&nbsp;Photochemistry&nbsp;of&nbsp;Gaseous&nbsp;Exoplanets</em>, PSJ,&nbsp;submitted). See <em>Introduction</em> and <em>Readme_Reference_model</em> for more details.</p>

opencc-by-4.0Dec 2020View details →
zenodo40/100

Planetary Atmosphere-Interior Model Outputs from Time-Evolution Movie

<p>This array contains the outputs from the movie version of Fig. 2 in Krissansen-Totton et al. (2021, Nature Astronomy). The numpy array can be loaded as follows</p> <p>Outputs = np.load(&quot;Output_arrays.npy&quot;,allow_pickle=True)</p> <p>The array has format Outputs[i][k][j]</p> <p>where i = 0, ... 5 (total_time, pO2, pCO2, pH2O, Tsurf, and AU)</p> <p>k = 0 , ..., 1437 is the iteration number</p> <p>j = 0 , ... , 2000 is the time index</p> <p>(AU is just a scalar providing orbital separation of that iteration)</p>

opencc-by-4.0Nov 2021View details →
zenodo40/100

Phanerozoic global climatic fields simulated using the FOAM ocean-atmosphere general circulation model

<p>These files contain the output of Phanerozoic global climate simulations conducted using the coupled ocean-atmosphere FOAM general circulation model. They are available every 20 Myrs between 540 Ma and 0 Ma, both included. All simulations have been conducted using identical boundary conditions;&nbsp;pCO2: 2240 ppm, solar luminosity:&nbsp;1368 W m-2, vegetation: rocky desert, orbital configuration: null eccentricity and minimum obliquity. Only the continental configuration was varied from one time slice to the other (sensitivity test to the continental configuration), using the reconstructions of Scotese and Wright (https://www.earthbyte.org/paleodem-resource-scotese-and-wright-2018/).</p> <p>The reader is referred to the associated paper for a full description of the model and boundary conditions.</p> <p>All file names use the following pattern: &quot;[age]rd_1368W_EccN_[model_component]_2240ppm.nc&quot;, with [age], the age expressed in million years ago, and [model_component] being &#39;atmos&#39;, &#39;ocean&#39; or &#39;coupl&#39; (atmospheric and oceanic components, plus coupler).</p>

opencc-by-4.0Dec 2021View details →
zenodo40/100

Climate model output for "The Unexpected Oceanic Peak in Energy Input to the Atmosphere and its Consequences for Monsoon Rainfall"

<p>Climate model output associated with the manuscript &quot;The Unexpected Oceanic Peak in Energy Input to the Atmosphere and its Consequences for Monsoon Rainfall&quot;</p>

opencc-by-4.0Nov 2021View details →
zenodo40/100

ExoCAM: A 3D Climate Model for Exoplanet Atmospheres :: Model data and supplementary figures and analysis

<p>This repository contains 3D GCM model output data from the paper, &quot;ExoCAM: A 3D Climate Model for Exoplanet Atmospheres&quot;, which is&nbsp;published in the Planetary Science Journal: Trapppist Habitable Atmospheres Intercomparison Special Issue. &nbsp;The model data includes mean climate states for the standard THAI simulations of TRAPPIST-1e, simulations using&nbsp;an upgraded radiative transfer,&nbsp;along with a large variety sensitivity experiments considering common tuning parameters of sub-grid scale cloud and convection physics. &nbsp;In total 43 simulations are included.&nbsp; Also included here are a variety of multi-panel contour plots showing basic results from all simulations as supplemental figures.</p> <p>https://iopscience.iop.org/article/10.3847/PSJ/ac3f3d</p>

opencc-by-4.0Sep 2021View details →
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Experimental and model data for "Nitrogen oxide production in laser-induced breakdown simulating impacts on the Hadean atmosphere"

<p>This is raw data and supporting figures associated with the publication: Heays, A. N., Kaiserov&aacute;, T., Rimmer, P. B., Kn&iacute;žek, A., Petera, L., Civi&scaron;, S., et al. (2022). Nitrogen oxide production in laser-induced breakdown simulating impacts on the Hadean atmosphere. <em>Journal of Geophysical Research: Planets</em>, 127, e2021JE006842. <a href="https://doi.org/10.1029/2021JE006842">https://doi.org/10.1029/2021JE006842</a></p> <p>Two data files contain model output of the ARGO atmospheric photochemistry code that was used to generate figures for Sec. 3 of the paper:</p> <ul> <li>ARGO_model_data_neutral_case.txt</li> <li>ARGO_model_data_reducing_case.txt</li> </ul> <p>The following data files contain a tabulation of laboratory-measured and modelled photoabsorption spectra as described in Sec. 2 of the paper.&nbsp; The A-G letter-encoding of these files follows Table 1 of the paper, and the spectral ranges correspond to the strongest bands of NO, N2O, and NO2. &nbsp;</p> <ul> <li>laboratory_spectrum_experiment_A_species_N2O.txt</li> <li>laboratory_spectrum_experiment_A_species_NO2.txt</li> <li>laboratory_spectrum_experiment_A_species_NO.txt</li> <li>laboratory_spectrum_experiment_B_species_N2O.txt</li> <li>laboratory_spectrum_experiment_B_species_NO2.txt</li> <li>laboratory_spectrum_experiment_B_species_NO.txt</li> <li>laboratory_spectrum_experiment_C_species_N2O.txt</li> <li>laboratory_spectrum_experiment_C_species_NO2.txt</li> <li>laboratory_spectrum_experiment_C_species_NO.txt</li> <li>laboratory_spectrum_experiment_D_species_N2O.txt</li> <li>laboratory_spectrum_experiment_D_species_NO2.txt</li> <li>laboratory_spectrum_experiment_D_species_NO.txt</li> <li>laboratory_spectrum_experiment_E_species_N2O.txt</li> <li>laboratory_spectrum_experiment_E_species_NO2.txt</li> <li>laboratory_spectrum_experiment_E_species_NO.txt</li> <li>laboratory_spectrum_experiment_F_species_N2O.txt</li> <li>laboratory_spectrum_experiment_F_species_NO2.txt</li> <li>laboratory_spectrum_experiment_F_species_NO.txt</li> <li>laboratory_spectrum_experiment_G_species_N2O.txt</li> <li>laboratory_spectrum_experiment_G_species_NO2.txt</li> <li>laboratory_spectrum_experiment_G_species_NO.txt</li> </ul> <p>The following file contains a tabulation of the full-spectral-range laboratory-measured photoabsorption spectrum of experiment A, along with a modelled spectrum.</p> <ul> <li><a href="https://zenodo.org/api/files/49f05962-9a34-4bbc-855c-1a0976f62531/laboratory_spectrum_experiment_A_full_spectrum.txt?versionId=79a70ade-63d1-4fd7-b423-176e27f8dc37">laboratory_spectrum_experiment_A_full_spectrum.txt </a></li> </ul> <p>The following file contains plots of the experimental spectra for all NxOy species in all measurements as well as the residual error of models fit to these spectra.&nbsp; Additional residual errors of model neglecting NxOy species indicates their contribution to the spectra.</p> <ul> <li>laboratory_spectrum_figures.pdf</li> </ul> <p>&nbsp;</p>

opencc-by-4.0Jan 2022View details →
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Modeling output for "The dynamic atmospheric and aeolian environment of Jezero crater, Mars"

<p>This dataset contains meso- and microscale numerical modeling output supporting the&nbsp;findings presented in the paper, &quot;Newman et al., The dynamic atmospheric and aeolian&nbsp;environment of Jezero crater, Mars, Science Advances&quot;</p>

opencc-by-4.0Apr 2022View details →

ScienceDex guides

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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record