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779
datasets available to search
ShareScore release 0.9.0
Dataset results
779 results for “CTCF”
CTCF modulates Estrogen Receptor function through specific chromatin and nuclear matrix interactions [ChIP-seq]
GEO Series GSE85106. Homo sapiens. 15 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Loss of imprinting at the CTCF binding sites in the DLK1-DIO3 domain reactivates microRNA expression in acute promyelocytic leukaemia
GEO Series GSE42543. Homo sapiens. 47 samples. Type: Methylation profiling by high throughput sequencing.
YY1 and CTCF Orchestrate a 3D Chromatin Looping Switch during Early Neural Lineage Commitment
GEO Series GSE85185. Mus musculus. 16 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
The ChAHP complex counteracts chromatin looping at Ctcf sites that have emerged from recent SINE expansions
GEO Series GSE125129. Mus musculus. 77 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
DNA Methylation Regulates Alternative Polyadenylation via CTCF and the Cohesin Complex
GEO Series GSE131606. Homo sapiens. 16 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Abnormal microglia and enhanced inflammation-related gene transcription in mice with conditional deletion of Ctcf in Camk2a-Cre-expressing neurons [Whole_HC_CTCF]
GEO Series GSE108825. Mus musculus. 8 samples. Type: Expression profiling by array.
TET-catalyzed 5-carboxylcytosine promotes CTCF binding to suboptimal sequences genome-wide
GEO Series GSE123101. Mus musculus. 20 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
CTCF modulates Estrogen Receptor function through specific chromatin and nuclear matrix interactions
GEO Series GSE85108. Homo sapiens. 18 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Dissecting developmental disorders caused by CTCF mutation at R567 [SPARC-seq]
GEO Series GSE214691. Mus musculus. 2 samples. Type: Other.
Genome-wide maps of CTCF in R1/E embryonic stem cells
GEO Series GSE25777. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Ectopic CTCFL/BORIS expression in ovarian cancer precursor cells enhances cellular motility and invasion through GALNT14 and alters CTCF chromatin occupancy
GEO Series GSE131931. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
CTCF depletion uncouples the role of enhancer-promoter interactions and higher-order chromatin hubs in gene regulation during cellular differentiation.
GEO Series GSE263641. Homo sapiens. 137 samples. Type: Other; Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
CTCF is selectively required for maintaining chromatin accessibility and gene expression in human erythropoiesis [RNA-seq]
GEO Series GSE281733. Homo sapiens. 18 samples. Type: Expression profiling by high throughput sequencing.
Topological demarcation by HMGB2 is disrupted early upon senescence entry and induces CTCF clustering across cell types
GEO Series GSE98448. Homo sapiens. 53 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing; Other.
Cancer-specific CTCF binding facilitates oncogenic transcriptional dysregulation
GEO Series GSE130140. Homo sapiens. 92 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other; Methylation profiling by high throughput sequencing.
The combined action of CTCF and its testis-specific paralog BORIS is essential for spermatogenesis
GEO Series GSE154249. Mus musculus. 54 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Cumulative in-cis mutagenesis in vivo reveals various functions for CTCF sites at the mouse Hoxd cluster [RNA-seq]
GEO Series GSE181385. Mus musculus. 36 samples. Type: Expression profiling by high throughput sequencing.
Disentangling the architectural and non-architectural functions of CTCF and cohesin in global gene regulation [EU-Seq]
GEO Series GSE262520. Mus musculus. 60 samples. Type: Other.
Sequential and directional insulation by conserved CTCF sites underlies the Hox timer in stembryos [scRNA-seq]
GEO Series GSE224905. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide comparative ChIP-seq data of CTCF and RNA-seq data in Drosophila white prepupa on Illumina Genome Analyzer
GEO Series GSE24449. Drosophila simulans; Drosophila pseudoobscura; Drosophila melanogaster; Drosophila yakuba. 21 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.