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203
datasets available to search
ShareScore release 0.9.0
Dataset results
203 results for “CpG island”
An evolutionarily conserved DNA-encoded logic shapes CpG island formation
GEO Series GSE72208. Danio rerio; Mus musculus. 17 samples. Type: Methylation profiling by high throughput sequencing.
Differentiation of human cardiomyocyte and thymic epithelial cells from H1 control hESCs and H1 hESCs uniquely modified to be DNA methylated at the promoter CpG island of MLH1.
GEO Series GSE210107. Homo sapiens. 36 samples. Type: Expression profiling by high throughput sequencing.
Aging of preleukemic thymocytes drives CpG island hypermethylation in T-cell acute lymphoblastic leukemia [RNAseq_DACPDX]
GEO Series GSE155336. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
The proline and serine rich protein PROSER1 mediates O-GlcNAcylation of TET2 to regulate DNA demethylation on UTX-dependent enhancers and CpG islands [WGBS]
GEO Series GSE172143. Homo sapiens. 4 samples. Type: Methylation profiling by high throughput sequencing.
The presence of RNA polymerase II, active or stalled, predicts epigenetic fate of promoter CpG islands
GEO Series GSE15154. Homo sapiens. 21 samples. Type: Methylation profiling by genome tiling array; Genome binding/occupancy profiling by genome tiling array; Expression profiling by array.
Direct ChIP-bisulfite sequencing reveals a role of H3K27me3 mediating aberrant hypermethylation of promoter CpG islands in cancer cells (RNA-seq)
GEO Series GSE43093. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
Lead exposure induces changes in 5-hydroxymethylcytosine clusters in CpG islands in human embryonic stem cells and umbilical cord blood [ELEMENT]
GEO Series GSE69633. Homo sapiens. 92 samples. Type: Methylation profiling by genome tiling array.
A Renal CpG Island Methylator Phenotype (R-CIMP) in Kidney Tumors Associated with Germline Mutations of FH and SDHB
GEO Series GSE126441. Homo sapiens. 56 samples. Type: Methylation profiling by genome tiling array.
Characterization of the ZFX family of transcription factors that bind downstream of the start site of CpG island promoters
GEO Series GSE145160. Homo sapiens. 58 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
The SAM domain-containing protein 1 (SAMD1) acts as a repressive chromatin regulator at unmethylated CpG islands
GEO Series GSE144396. Mus musculus. 55 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Clustering of CpG islands constitutes an important determinant of the interphase chromosome 3D organization [ChIP-Seq]
GEO Series GSE51846. Gallus gallus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Methylation detection Oligonucleotide Microarray Analysis: high resolution method for CpG island methylation detection 2
GEO Series GSE15747. Homo sapiens. 18 samples. Type: Methylation profiling by genome tiling array.
Gene silencing triggers Polycomb Repressive Complex 2 recruitment to CpG islands genome-wide [ChIP-seq_differentiation]
GEO Series GSE58021. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Clustering of CpG islands constitutes an important determinant of the interphase chromosome 3D organization
GEO Series GSE51939. Gallus gallus. 10 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
MCTA-Seq for profiling hypermethylated CpG islands in plasma of hepatocellular carcinoma patients
GEO Series GSE63775. Homo sapiens. 183 samples. Type: Methylation profiling by high throughput sequencing.
Cell Type-Specific DNA Methylation at Intragenic CpG Islands in the Immune System (gene expression data)
GEO Series GSE25578. Mus musculus. 18 samples. Type: Expression profiling by array.
CpG island mediated linear and spatial gene partitioning (RNA-seq)
GEO Series GSE80793. Homo sapiens; Mus musculus. 0 samples. Type: Expression profiling by high throughput sequencing; Third-party reanalysis.
Discovery of novel hypermethylated gene loci in prostate cancer using genome wide coverage CpG island microarrays
GEO Series GSE15298. Homo sapiens. 20 samples. Type: Methylation profiling by genome tiling array.
Effects of genome architecture and epigenetic factors on susceptibility of promoter CpG islands to aberrant DNA methylation induction.
GEO Series GSE28284. Homo sapiens. 26 samples. Type: Methylation profiling by genome tiling array.
DNA methyation of intragenic CpG islands are required for differentiation from iPSC to NPC
GEO Series GSE156723. Homo sapiens. 13 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.