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148
datasets available to search
ShareScore release 0.9.0
Dataset results
148 results for “DNA accessibility”
DNA accessibility determines the level of Notch signal strength necessary for lineage specific target gene expression (Dnase-Seq)
GEO Series GSE142736. Mus musculus. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Landscape of Monoallelic DNA Accessibility and Gene Regulatory Networks during Reprogramming to Naive Pluripotency and X Chromosome Reactivation [smart-seq]
GEO Series GSE153846. Mus musculus. 672 samples. Type: Expression profiling by high throughput sequencing.
The long non-coding RNA ELDR suppresses tumorigenicity of AML cell lines with MLL rearrangements by interfering with DNA replication and chromatin accessibility [ATAC-Seq]
GEO Series GSE273382. Homo sapiens. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Neuronal brain region-specific DNA methylation and chromatin accessibility are associated with neuropsychiatric trait heritability [RNA-Seq]
GEO Series GSE96613. Homo sapiens. 20 samples. Type: Expression profiling by high throughput sequencing.
Developmental dynamics of DNA accessibility during flower development [DNaseI-Seq]
GEO Series GSE46894. Arabidopsis thaliana. 5 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Unusual DNA packaging characteristics in endo-reduplicated C. elegans oocytes defined by in vivo accessibility to an endogenous nuclease activity
GEO Series GSE46499. Caenorhabditis elegans. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genomic dna hybridizations of 10 Spring annual accessions of Arabidopsis thaliana
GEO Series GSE27549. Arabidopsis thaliana. 30 samples. Type: Other.
Changes of DNA accessibility and RNA transcription upon SWI/SNF inhibition in peripheral blood and bone marrow cells [multiome]
GEO Series GSE205570. Mus musculus. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
AcceSssIble: an array-based assay for the study of chromatin accessibility and DNA methylation using the CpG methyltransferase SssI
GEO Series GSE36580. Homo sapiens. 10 samples. Type: Methylation profiling by array.
LSH facilitates DNA methylation primarily by promoting UHRF1 DNA accessibility and DNA methylation by DNMT1
GEO Series GSE136931. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.
ATAC-seq to investigate the effect of DGCR8 knockout and heterozygosity DNA accessibility in PA-1 cells
GEO Series GSE205798. Homo sapiens. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
CHANGES IN DNA ACCESSIBILITY OCCUR IN PUTATIVE ENHANCER REGIONS OF A SUBSET OF T CELL MEMORY RESPONSIVE GENES
GEO Series GSE63766. Homo sapiens. 9 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Decitabine disrupts EBV genomic epiallele DNA methylation patterns around CTCF binding sites to increase chromatin accessibility and lytic transcription in gastric cancer [RNA]
GEO Series GSE239767. human gammaherpesvirus 4. 18 samples. Type: Expression profiling by high throughput sequencing.
Difference of DNA methylation and Chromatin accessibility of T24 SP cell and T24 NSP cell
GEO Series GSE130641. Homo sapiens. 4 samples. Type: Methylation profiling by array.
Functional DNA methylation is accompanied by chromatin accessibility [methylation]
GEO Series GSE43851. Homo sapiens. 20 samples. Type: Methylation profiling by array.
DNA accessibility determines the level of Notch signal strength necessary for lineage specific target gene expression (RNA-Seq)
GEO Series GSE142738. Mus musculus. 10 samples. Type: Expression profiling by high throughput sequencing.
DNA accessibility determines the level of Notch signal strength necessary for lineage specific target gene expression
GEO Series GSE142739. Mus musculus. 22 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Autophagy controls DNA accessibility to immunoglobulin variable regions and centroblast dynamics
GEO Series GSE218052. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Genomic dna hybridizations of 8 winter annual accessions of Arabidopsis thaliana
GEO Series GSE27551. Arabidopsis thaliana. 24 samples. Type: Other.
Coupling CRISPR scanning with targeted chromatin accessibility profiling using a double-stranded DNA deaminase [Nanopore]
GEO Series GSE284033. Homo sapiens. 109 samples. Type: Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.